CX300749

Overview
NameCX300749
Unique NameCX300749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2B_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Homo sapiens GN=CAMK2B PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.235e-32
Identity = 70/157 (44.59%), Postives = 104/157 (66.24%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F   Y L  ++G GAFSVV+  + L TG + A KI++ KKLS  D+Q L  E +I   L H +I++L ++  E    Y+V +LV GGELF+ IVA+ +Y+E +A   I+ +LE + + H+MG+VHRDLKPENLLL S+   + +K+ADFG A  ++
Sbjct:    9 RFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ 165          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2B_BOVIN (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Bos taurus GN=CAMK2B PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.235e-32
Identity = 70/157 (44.59%), Postives = 104/157 (66.24%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F   Y L  ++G GAFSVV+  + L TG + A KI++ KKLS  D+Q L  E +I   L H +I++L ++  E    Y+V +LV GGELF+ IVA+ +Y+E +A   I+ +LE + + H+MG+VHRDLKPENLLL S+   + +K+ADFG A  ++
Sbjct:    9 RFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ 165          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2_YEAST (Calcium/calmodulin-dependent protein kinase II OS=Saccharomyces cerevisiae GN=CMK2 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.612e-32
Identity = 68/155 (43.87%), Postives = 103/155 (66.45%), Query Frame = 1
Query:  103 NYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMM--EIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            NY+  R LG+G+F VV+ A  L T +  A+KI+ KK L   + Q  M+  E+ IL +L HP+I+   + ++    FYIVT+L  GGELFDRI+++  +TE +A ++I  +L  + YMH   +VHRDLKPEN+L   ++++S + IADFG AK++K
Sbjct:   46 NYIFGRTLGAGSFGVVRQARKLSTNEDVAIKILLKKALQGNNVQLQMLYEELSILQKLSHPNIVSFKDWFESKDKFYIVTQLATGGELFDRILSRGKFTEVDAVEIIVQILGAVEYMHSKNVVHRDLKPENVLYVDKSENSPLVIADFGIAKQLK 200          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: MYLKD_DICDI (Probable myosin light chain kinase DDB_G0292624 OS=Dictyostelium discoideum GN=DDB_G0292624 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.592e-32
Identity = 72/154 (46.75%), Postives = 106/154 (68.83%), Query Frame = 1
Query:  103 NYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIKD 564
            +Y L +E+G GAFSVV L    +T ++ A+KI+ KK  S     AL  EI+I+ ++DHP+I+K+ E ++     Y+V ELV GG LFDRIV K  +TEKEA+ + + +L+++ Y+H +GIVHRDLKPENLLL + T D  + ++DFG +K + D
Sbjct:    5 DYELHKEIGKGAFSVVFLVTEKKTKKQWAMKIIDKKSSSKA---ALETEIEIMKKVDHPNIVKMHEYFESTDKIYLVVELVTGGPLFDRIVDKKSFTEKEAKLITQQLLQSLVYLHSIGIVHRDLKPENLLLKTPT-DLTVALSDFGLSKIVGD 154          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.127e-32
Identity = 76/171 (44.44%), Postives = 107/171 (62.57%), Query Frame = 1
Query:   40 RKMGSAASANKM-HVGNKKFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFA 549
            R   SA SA++  H+GN      Y L + +G G F+ VKLA H+ TG++ AVKI+ K +L+    Q L  E++I+  L+HP+I+KLFE  +     Y+V E  +GGE+FD +VA     EKEAR   + ++  + Y H+  IVHRDLK ENLLL +   D +IKIADFGF+
Sbjct:   36 RGRNSATSADEQPHIGN------YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFS 197          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: MARK2_MOUSE (Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 6.127e-32
Identity = 76/171 (44.44%), Postives = 107/171 (62.57%), Query Frame = 1
Query:   40 RKMGSAASANKM-HVGNKKFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFA 549
            R   SA SA++  H+GN      Y L + +G G F+ VKLA H+ TG++ AVKI+ K +L+    Q L  E++I+  L+HP+I+KLFE  +     Y+V E  +GGE+FD +VA     EKEAR   + ++  + Y H+  IVHRDLK ENLLL +   D +IKIADFGF+
Sbjct:   36 RGRNSATSADEQPHIGN------YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFS 197          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 6.127e-32
Identity = 76/171 (44.44%), Postives = 107/171 (62.57%), Query Frame = 1
Query:   40 RKMGSAASANKM-HVGNKKFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFA 549
            R   SA SA++  H+GN      Y L + +G G F+ VKLA H+ TG++ AVKI+ K +L+    Q L  E++I+  L+HP+I+KLFE  +     Y+V E  +GGE+FD +VA     EKEAR   + ++  + Y H+  IVHRDLK ENLLL +   D +IKIADFGF+
Sbjct:   36 RGRNSATSADEQPHIGN------YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIADFGFS 197          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.002e-32
Identity = 67/156 (42.95%), Postives = 98/156 (62.82%), Query Frame = 1
Query:   88 KKFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKL-SDEDYQALMMEIQILSEL-DHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFA 549
            K    NY L + LG G F    L  H +TGQK A K + K+KL   EDY  ++ EIQI+  L ++P+++++   Y++  + ++V EL  GGELFDRIV + HY+E+EA  LIK ++  +   H +G+VHRDLKPEN L  S  +D+ +K  DFG +
Sbjct:   16 KNVEDNYFLGQVLGQGQFGTTFLCTHKQTGQKLACKSIPKRKLLCQEDYDDVLREIQIMHHLSEYPNVVRIESAYEDTKNVHLVMELCEGGELFDRIVKRGHYSEREAAKLIKTIVGVVEACHSLGVVHRDLKPENFLFSSSDEDASLKSTDFGLS 171          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC1D_MOUSE (Calcium/calmodulin-dependent protein kinase type 1D OS=Mus musculus GN=Camk1d PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.045e-31
Identity = 75/171 (43.86%), Postives = 111/171 (64.91%), Query Frame = 1
Query:   40 RKMGSAASANKMHVGNKKFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAK 552
            R+ G ++S+ K    + K  + +     LG+GAFS V LA    TG+  AVK + KK L  ++  ++  EI +L ++ H +I+ L + Y+     Y+V +LV+GGELFDRIV K  YTEK+A  LI+ +L+ + Y+H+MGIVHRDLKPENLL  S+ ++S I I+DFG +K
Sbjct:    3 RENGESSSSWKKQAEDIK--KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 170          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC1D_HUMAN (Calcium/calmodulin-dependent protein kinase type 1D OS=Homo sapiens GN=CAMK1D PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.045e-31
Identity = 75/171 (43.86%), Postives = 111/171 (64.91%), Query Frame = 1
Query:   40 RKMGSAASANKMHVGNKKFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAK 552
            R+ G ++S+ K    + K  + +     LG+GAFS V LA    TG+  AVK + KK L  ++  ++  EI +L ++ H +I+ L + Y+     Y+V +LV+GGELFDRIV K  YTEK+A  LI+ +L+ + Y+H+MGIVHRDLKPENLL  S+ ++S I I+DFG +K
Sbjct:    3 RENGESSSSWKKQAEDIK--KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 170          
The following BLAST results are available for this feature:
BLAST of CX300749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KCC2B_HUMAN1.235e-3244.59Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2B_BOVIN1.235e-3244.59Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2_YEAST1.612e-3243.87Calcium/calmodulin-dependent protein kinase II OS=... [more]
MYLKD_DICDI3.592e-3246.75Probable myosin light chain kinase DDB_G0292624 OS... [more]
MARK2_RAT6.127e-3244.44Serine/threonine-protein kinase MARK2 OS=Rattus no... [more]
MARK2_MOUSE6.127e-3244.44Serine/threonine-protein kinase MARK2 OS=Mus muscu... [more]
MARK2_HUMAN6.127e-3244.44Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]
CDPKC_ARATH8.002e-3242.95Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]
KCC1D_MOUSE1.045e-3143.86Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1D_HUMAN1.045e-3143.86Calcium/calmodulin-dependent protein kinase type 1... [more]

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Properties
Property NameValue
Genbank descriptionC08001G11SK PhyRootSw1 Citrus sinensis cDNA clone C08001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300749 ID=CX300749; Name=CX300749; organism=Citrus sinensis; type=EST; length=586bp
CTCGTGCCGAATTCGGCACGAGGGTAACAGATAAATCAAAGGAAAATGGG
AAGTGCAGCATCAGCGAATAAAATGCATGTGGGCAACAAGAAGTTTGCTC
AGAATTATATGTTAGCTAGAGAACTCGGTAGTGGCGCCTTTTCTGTTGTC
AAACTCGCTATGCATCTAGAAACCGGTCAGAAGGCTGCGGTTAAGATAGT
ATCGAAGAAGAAACTGAGCGATGAAGATTATCAAGCCCTCATGATGGAAA
TCCAAATTTTGTCCGAATTAGATCATCCTCATATTATTAAACTGTTCGAA
ACATACGATGAAGGAACAGATTTTTATATAGTTACAGAATTAGTTGCAGG
TGGTGAATTATTTGATCGTATTGTAGCAAAAGCACATTATACAGAAAAGG
AAGCTAGAGATTTAATTAAGATTATGTTAGAAACTATGGCATATATGCAT
AAAATGGGTATTGTCCATCGTGATTTAAAACCAGAGAATTTATTATTATG
TTCAGAAACTGATGATTCTGATATTAAAATAGCTGATTTTGGTTTTGCTA
AGCGTATAAAAGATTTATCACCAAAAGAAACAGCAT
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