CX300736

Overview
NameCX300736
Unique NameCX300736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.551e-21
Identity = 47/91 (51.65%), Postives = 56/91 (61.54%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 273
            C A+VN  CPS L V+  +G V  C+SAC A    +YCCTG +  P  C PT +S +FK  CP+AYSYAYDD TS   C     Y ITFCP
Sbjct:  160 CGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20
Identity = 44/91 (48.35%), Postives = 53/91 (58.24%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 273
            C  +VNA CP+EL   G       C +AC  F + +YCC G+      C PT YS+ FK QCP AYSY  DD TSTF+C  G NY + FCP
Sbjct:  124 CAVDVNARCPAELRQDG------VCNNACPVFKKDEYCCVGS--AANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.746e-20
Identity = 44/91 (48.35%), Postives = 53/91 (58.24%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 273
            C  +VNA CP+EL   G       C +AC  F + +YCC G+      C PT YS+ FK QCP AYSY  DD TSTF+C  G NY + FCP
Sbjct:  145 CAVDVNARCPAELRQDG------VCNNACPVFKKDEYCCVGS--AANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 227          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.650e-18
Identity = 41/91 (45.05%), Postives = 51/91 (56.04%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 273
            C A++N  CPSEL  +G       C + C  F   QYCC        +C PT YS+ FK +CP AYSY  DD  STF+C GG +Y + FCP
Sbjct:  123 CTADINGQCPSELKTQGG------CNNPCTVFKTDQYCCNSG-----SCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.814e-18
Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 273
            C A++N  CP+EL   G       C + C  F   QYCC         C  T +SK FKD+CP AYSY  DD+TSTF+C  G NY + FCP
Sbjct:  146 CTADINGQCPNELRAPGG------CNNPCTVFKTDQYCCNSG-----NCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.675e-18
Identity = 45/92 (48.91%), Postives = 51/92 (55.43%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGG-PNYDITFCP 273
            C AN+N  CP EL V G       C + C  F   QYCCT        C PT +SK FK +CP AYSY  DD TSTF+C GG  NY + FCP
Sbjct:  146 CTANINGECPRELRVPGG------CNNPCTTFGGQQYCCTQG-----PCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCP 226          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.824e-17
Identity = 44/92 (47.83%), Postives = 50/92 (54.35%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGG-PNYDITFCP 273
            C AN+N  CP  L V G       C + C  F   QYCCT        C PT+ SK FK +CP AYSY  DD TSTF+C GG  NY + FCP
Sbjct:  146 CTANINGECPRALKVPGG------CNNPCTTFGGQQYCCTQG-----PCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.111e-17
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 273
            C A +N  CP++L  +G       C + C      +YCCT   N P +C PT  S+ FK++CP AYSY  DD TS F+C  G NY + FCP
Sbjct:  145 CTAPINEQCPAQLKTQGG------CNNPCTVIKTNEYCCT---NGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17
Identity = 43/92 (46.74%), Postives = 50/92 (54.35%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSC-TGGPNYDITFCP 273
            C AN+N  CP  L V G       C + C  F   QYCCT        C PT+ SK FK +CP AYSY  DD TSTF+C +G  NY + FCP
Sbjct:  146 CTANINGECPRALKVPGG------CNNPCTTFGGQQYCCTQG-----PCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.051e-17
Identity = 42/92 (45.65%), Postives = 49/92 (53.26%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSC-TGGPNYDITFCP 273
            C AN+N  CP  L V G       C + C  F   QYCCT        C PT  S+ FK +CP AYSY  DD TSTF+C +G  NY + FCP
Sbjct:  138 CTANINGECPGSLRVPGG------CNNPCTTFGGQQYCCTQG-----PCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 218          
The following BLAST results are available for this feature:
BLAST of CX300736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
TLPH_ORYSJ3.551e-2151.65Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
IAAT_MAIZE6.697e-2048.35Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
ZEAM_MAIZE8.746e-2048.35Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
P21_SOYBN1.650e-1845.05Protein P21 OS=Glycine max PE=1 SV=1[more]
TLP_ACTDE2.814e-1845.05Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
OSMO_TOBAC3.675e-1848.91Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
NP24_SOLLC1.824e-1747.83Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
PRR1_TOBAC3.111e-1742.86Pathogenesis-related protein R major form OS=Nicot... [more]
OS81_SOLCO5.306e-1746.74Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
TPM1_SOLLC9.051e-1745.65Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]

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Properties
Property NameValue
Genbank descriptionC08001F10SK PhyRootSw1 Citrus sinensis cDNA clone C08001F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300736 ID=CX300736; Name=CX300736; organism=Citrus sinensis; type=EST; length=652bp
TGTAAAGCCAACGTGAATGCTGTTTGTCCATCAGAGCTAGCAGTCAAAGG
ATCCGATGGGAATGTTATTGCTTGCAAGAGTGCATGTGCAGCTTTTAATG
AACCACAATATTGTTGCACTGGGGCATTCAATAAACCTGAGACTTGCCCA
CCGACTAAATATTCTAAGATTTTCAAAGACCAGTGCCCTCAAGCTTATAG
CTATGCTTATGATGATCGCACTAGCACATTTTCTTGCACTGGTGGTCCTA
ATTACGATATTACTTTCTGTCCCTGAGAGATATTAGTAAGTAACGGAGGT
TGCCTAAAACTTTCAGCTTAAAATTTTAACATAATTTTAAGGTAATGATA
TCATGCAATATTTAATAGTAGATGATGAAAATAAAAGATAATTTTTTGTG
GTATCAAATTCATTCATCATCTCTGTTAAATAAATTGCATGAAATCATGG
ACTCAAAATTCATGTTAAGATTTAAGTTAAAATAGCACCATCAATCCTCT
GTAAGCTTGAAATAAAAGTAATAAGTTGTCACATTGTATCAACAAAATAA
GTCCTGACAATGGACGACTTTCTATGCTAATATTTGTCATGGTGTATGTA
TGACAAAACATAAATAAATAAGAGAAAGTTATCATAAAAAAAAAAAAAAA
AA
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