CX300736

Overview
NameCX300736
Unique NameCX300736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.051e-17
Identity = 42/92 (45.65%), Postives = 49/92 (53.26%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSC-TGGPNYDITFCP 273
            C AN+N  CP  L V G       C + C  F   QYCCT        C PT  S+ FK +CP AYSY  DD TSTF+C +G  NY + FCP
Sbjct:  146 CTANINGECPGSLRVPGG------CNNPCTTFGGQQYCCTQG-----PCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.182e-16
Identity = 43/99 (43.43%), Postives = 54/99 (54.55%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP*EILVSNG 297
            C A++N  CP+ L   G       C + C  F   QYCCT   N   +C  T+YS+ FK +CP AYSY  DD TSTF+CT   NY + FCP   L + G
Sbjct:  143 CTADINGQCPNVLRAPGG------CNNPCTVFQTNQYCCT---NGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTCT-NTNYRVVFCPRSRLGATG 231          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.016e-16
Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVK--GSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFC 270
            C+AN+   CP+ L  +  G  G V+ CKSAC AF   ++CC   +N P+TC P+ YS+ FK  CP  ++YA+D  +    C+      + FC
Sbjct:  160 CRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFC 251          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.307e-15
Identity = 41/92 (44.57%), Postives = 49/92 (53.26%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTG-GPNYDITFCP 273
            C AN+N  CP  L V G       C + C  F   QYCCT        C PT+ S+ FK +CP AYSY  DD TSTF+CT    +Y + FCP
Sbjct:  147 CTANINGECPGSLRVPGG------CNNPCTTFGGQQYCCTQG-----PCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.229e-15
Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 273
            C A +N  CP++L  +G       C + C      ++CCT   N P +C PT  S+ FK +CP AYSY  DD  S F+C  G NY + FCP
Sbjct:  145 CTAPINEQCPAQLKTQGG------CNNPCTVIKTNEFCCT---NGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.487e-15
Identity = 40/92 (43.48%), Postives = 48/92 (52.17%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSC-TGGPNYDITFCP 273
            C AN+N  CP  L V G       C + C  F   QYCCT        C PT  S+ FK +CP AYSY  DD TSTF+C +   +Y + FCP
Sbjct:  147 CVANINGECPGSLRVPGG------CNNPCTTFGGQQYCCTQG-----PCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFCP 227          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.367e-14
Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 273
            C A++   CP++L   G       C  AC  F   +YCCT        C PT+YS+ FK  CP A+SY   D+ +T +C G  NY +TFCP
Sbjct:  148 CAADIVGQCPAKLKAPGG-----GCNDACTVFQTSEYCCTTG-----KCGPTEYSRFFKRLCPDAFSYVL-DKPTTVTCPGSSNYRVTFCP 227          
BLAST of CX300736 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.367e-14
Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 1
Query:    1 CKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 273
            C A++   CP++L   G       C  AC  F   +YCCT        C PT+YS+ FK  CP A+SY   D+ +T +C G  NY +TFCP
Sbjct:  126 CAADIVGQCPAKLKAPGG-----GCNDACTVFQTSEYCCTTG-----KCGPTEYSRFFKRLCPDAFSYVL-DKPTTVTCPGSSNYRVTFCP 205          
The following BLAST results are available for this feature:
BLAST of CX300736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
OS13_SOLCO9.051e-1745.65Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
OSL3_ARATH1.182e-1643.43Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
OLP1_SOLLC2.016e-1638.04Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
OLPA_TOBAC1.307e-1544.57Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
PRR2_TOBAC2.229e-1540.66Pathogenesis-related protein R minor form OS=Nicot... [more]
OS35_SOLCO6.487e-1543.48Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
THM2_THADA9.367e-1439.56Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA9.367e-1439.56Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC08001F10SK PhyRootSw1 Citrus sinensis cDNA clone C08001F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300736 ID=CX300736; Name=CX300736; organism=Citrus sinensis; type=EST; length=652bp
TGTAAAGCCAACGTGAATGCTGTTTGTCCATCAGAGCTAGCAGTCAAAGG
ATCCGATGGGAATGTTATTGCTTGCAAGAGTGCATGTGCAGCTTTTAATG
AACCACAATATTGTTGCACTGGGGCATTCAATAAACCTGAGACTTGCCCA
CCGACTAAATATTCTAAGATTTTCAAAGACCAGTGCCCTCAAGCTTATAG
CTATGCTTATGATGATCGCACTAGCACATTTTCTTGCACTGGTGGTCCTA
ATTACGATATTACTTTCTGTCCCTGAGAGATATTAGTAAGTAACGGAGGT
TGCCTAAAACTTTCAGCTTAAAATTTTAACATAATTTTAAGGTAATGATA
TCATGCAATATTTAATAGTAGATGATGAAAATAAAAGATAATTTTTTGTG
GTATCAAATTCATTCATCATCTCTGTTAAATAAATTGCATGAAATCATGG
ACTCAAAATTCATGTTAAGATTTAAGTTAAAATAGCACCATCAATCCTCT
GTAAGCTTGAAATAAAAGTAATAAGTTGTCACATTGTATCAACAAAATAA
GTCCTGACAATGGACGACTTTCTATGCTAATATTTGTCATGGTGTATGTA
TGACAAAACATAAATAAATAAGAGAAAGTTATCATAAAAAAAAAAAAAAA
AA
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