CX300731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB1_COLGR (Tubulin beta-1 chain OS=Colletotrichum graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.868e-23 Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+ S+ A L + E+T +F+P N++ D R G+++ C M+RG V K V + IK K + FV+W P + PP G D++ + N+TAI + R+ +F LM+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 270 FAPLTSS--ASFSNLGIAELTQQMFDPKNVMLASDFRDGRFLTCSTMFRGKVSMKQVEEQIQAIKNKNSANFVEWIPNNIQTAHCSVPP---KGLDVSST-----FIGNSTAIQNSFRRVGDQFSLMFRRKAFLHWYTGEGMDEMEFTEAESNM 413
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB1_CHOCR (Tubulin beta-1 chain OS=Chondrus crispus GN=TUBB PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.868e-23 Identity = 52/154 (33.77%), Postives = 85/154 (55.19%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+ ++ A + LSV E+ +F+ +NM+ + DPR G+Y+ + +RG V K+V + ++TK + FV+W P K + P A + + + NTTAI R ++F M+ ++AF+HWY EGM+E EFSEA +L Sbjct: 272 HAPLAASNSAGYRSLSVPELAGQMFDRNNMMAEIDPREGRYLTAAVYFRGKVSTKEVEDEMTLMQTKNSAYFVEWIPHNIKTSVCDIP--------AAGEKISSAFIGNTTAIEATFKRFGNQFRSMFRRKAFLHWYKSEGMDELEFSEAESNL 417
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB_PHANO (Tubulin beta chain OS=Phaeosphaeria nodorum GN=tubA PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 8.970e-23 Identity = 50/154 (32.47%), Postives = 84/154 (54.55%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+ S ++V E+T +F+P NM+ D R+G+Y+ C +RG V K+V + ++ K + FV+W P + + PP ++ + V N+T+I E RI +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 270 FAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAYFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSVPP--------RGLKMSATFVGNSTSIQELFKRIGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB3_SOYBN (Tubulin beta chain (Fragment) OS=Glycine max GN=TUBB PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 8.970e-23 Identity = 48/147 (32.65%), Postives = 81/147 (55.10%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 449 +AP+ S + L+V E+T +++ NM+ DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ A + N+T+I E R+ +F M+ ++AF+HWY GEGM+E EF Sbjct: 270 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF 408
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.172e-22 Identity = 49/154 (31.82%), Postives = 88/154 (57.14%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+ + + ++V E+T+ +F+ NM+ DPRHG+Y+ +RG V K+V + ++++K + FV+W P + + P G ++ +V + N+TAI + RI +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 270 FAPLTARGSQQYRAVTVPELTSQMFDAKNMMAASDPRHGRYLTVAAYFRGKVSMKEVEENMLSVQSKNSNYFVEWIPN----NVQTAHCDIAPRG----LKMSVTFIGNSTAIQDLFKRIADQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVI (Tubulin beta-1 chain OS=Trichoderma viride GN=tub1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.172e-22 Identity = 49/154 (31.82%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+ S ++V E+T + +P NM+ D R+G+Y+ C ++RG V K+V + T++ K + FV+W P + PP ++ + V N+TAI E R+ +F M+ ++AF+HWY EGM+E EF+EA ++ Sbjct: 272 FAPLTSPGAHSFRAVTVPELTQQMMDPKNMMAASDFRNGRYLTCSTIFRGKVAMKEVEDQMRTVQNKNSAYFVEWIPNNIQTACALSPP--------RGLKISSTFVGNSTAIQEIFRRVGEQFSAMFRRQAFLHWYTSEGMDEMEFTEAESNM 417
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB_YEAST (Tubulin beta chain OS=Saccharomyces cerevisiae GN=TUB2 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.530e-22 Identity = 50/154 (32.47%), Postives = 85/154 (55.19%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 YAP+ + L+V E+T +F+ NM+ DPR+G+Y+ +RG V K+V + +++K + FV+W P + + +V P G + A ++N+T+I E R+ +F M+ ++AF+HWY EGM+E EFSEA ++ Sbjct: 270 YAPLTAIGSQSFRSLTVPELTQQMFDAKNMMAAADPRNGRYLTVAAFFRGKVSVKEVEDEMHKVQSKNSDYFVEWIPNNVQTAV----CSVAPQG----LDMAATFIANSTSIQELFKRVGDQFSAMFKRKAFLHWYTSEGMDELEFSEAESNM 415
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB_UNCNE (Tubulin beta chain OS=Uncinula necator PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.998e-22 Identity = 48/154 (31.17%), Postives = 85/154 (55.19%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+ S ++V E+T +++P NM+ D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + V N+T+I E R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 270 FAPLTSRGAHSFRAVTVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB2_ERYPI (Tubulin beta-2 chain OS=Erysiphe pisi GN=TUB2 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.998e-22 Identity = 48/154 (31.17%), Postives = 85/154 (55.19%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+ S ++V E+T +++P NM+ D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + V N+T+I E R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 270 FAPLTSRGAHSFRAVTVPELTQQMYDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSAYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVE (Tubulin beta-1 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.998e-22 Identity = 50/154 (32.47%), Postives = 84/154 (54.55%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+ S +SV E+T + +P NM+ D R+G+Y+ C ++RG V K+V + +I+ K + FV+W P + + PP ++ + V N+TAI E R+ +F M+ ++AF+HWY EGM+E EF+EA ++ Sbjct: 270 FAPLTSPGAHSFRAVSVPELTQQMLDPKNMMAASDFRNGRYLTCSTIFRGKVAMKEVEDQMRSIQNKNSTYFVEWIPNNIQTALCSIPP--------KGLKISSTFVGNSTAIQEIFRRVGEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNM 415 The following BLAST results are available for this feature:
BLAST of CX300731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300731 ID=CX300731; Name=CX300731; organism=Citrus sinensis; type=EST; length=470bpback to top |