CX300731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB_PLESA (Tubulin beta chain OS=Pleurotus sajor-caju PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.209e-21 Identity = 48/152 (31.58%), Postives = 81/152 (53.29%), Query Frame = 3 Query: 15 PIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 P+ + + ++V E+T +F+ NM+ DPRHG+Y+ ++RG V K+V + ++ K + FV+W P PP + AV + N+TAI E R++ +F M+ ++AF+HWY EGM+E EF+EA ++ Sbjct: 272 PLTARGSQQYRAVTVPELTQQMFDAKNMMAASDPRHGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIPNNVLTAQCDIPP--------RGCKMAVTFLGNSTAIQELFKRVNDQFAAMFKRKAFLHWYTQEGMDEMEFTEAESNM 415
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB1_GEOCN (Tubulin beta-1 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 2.209e-21 Identity = 46/154 (29.87%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 YAP+ + + L+V E+T +F+ NM+ DP+ G+Y+ +RG V K+V + +++ + + FV+W P + I PP V+ + ++N+T+I E R+ +F M+ ++AF+HWY EGM+ EF+EA ++ Sbjct: 270 YAPLSAPGQQSFRSLTVPELTQQLFDSKNMMAASDPKRGRYLTVAAFFRGKVSIKEVEDQMRSVQERNSAYFVEWIPNNVQTAICSVPP--------KDVKMSATFIANSTSIQELFKRVGDQFSAMFRRKAFLHWYTNEGMDITEFAEAESNM 415
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB_AJECA (Tubulin beta chain OS=Ajellomyces capsulata GN=TUB2 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 4.922e-21 Identity = 48/154 (31.17%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+ S ++V E+T +++P NM+ D R+G+Y+ ++RG V K+V + ++ K FV+W P + + PP ++ + V N+TAI E R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 271 FAPLTSRGAYSFRVVTVPELTQKMYDPKNMMCLLDFRNGRYLTASAIFRGKVSMKEVEDQMRNVQNKNHTYFVEWIPNNVQTALCSIPPR--------GLKMSSTFVENSTAIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 416
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBB3_ANEPH (Tubulin beta-3 chain (Fragment) OS=Anemia phyllitidis GN=TUBB3 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.432e-20 Identity = 46/154 (29.87%), Postives = 81/154 (52.60%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+ S + L+V E+T +++ NM+ DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ A + N+++I E R M+ ++AF+HWY EGM+E EF+E ++ Sbjct: 66 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQLINVQNKNSSYFVEWIPNNVKSSVCDIPP--------VGLKMACTFIGNSSSIQEMFRRDATSLTAMFRRKAFLHWYTWEGMDEMEFTEEESNM 211
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBBP_DROME (Probable tubulin beta chain CG32396 OS=Drosophila melanogaster GN=CG32396 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.340e-18 Identity = 46/154 (29.87%), Postives = 80/154 (51.95%), Query Frame = 3 Query: 9 YAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +AP+++ ++ + +V E+ +F +N+L D R GK + ++RG + P++V+ + ++ K FVDW P K I PP ++ + + NTTAI R+ M ++A +HWY GEGMEE EF +A+++L Sbjct: 269 FAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRGRMSPREVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPP--------RGLKMSATFIGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQEL 414
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBG_RETFI (Tubulin gamma chain OS=Reticulomyxa filosa PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.176e-12 Identity = 42/164 (25.61%), Postives = 83/164 (50.61%), Query Frame = 3 Query: 3 TSYAP-IISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAV--CMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWY-----VGEGMEEGEFSEAREDL 470 TS+ P +I + ++ SV ++ + +P N++ C + G Y++ + RGDV P D++ ++ I+ K+ V F+ W P + ++ Q P A V V CM++N + + +RI +D++ + AF++ Y E ++ EF +A+E + Sbjct: 270 TSFTPLVIKGAQRRIQKTSVLDVMRRLLQPKNIMVSCGTKKGVYVSILDIIRGDVDPTDIHKSLQRIREKKIVNFIPWGPASIQVALSKQSP-------YANVPYRVSGCMMANHSNLGNLFARIIRTYDILRKRNAFLNVYKETPVFSENLD--EFEDAKETI 424
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.073e-11 Identity = 39/137 (28.47%), Postives = 67/137 (48.91%), Query Frame = 3 Query: 63 EITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEAREDL 470 ++ + F + L + DP+H Y+AC +M RG+V D+ + +K ++QFV W G+K + PP ++ ++N T + + +F +Y K+A +H Y+ EGMEE F+EA L Sbjct: 321 QMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDLRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP--------VGHSHSLLALANNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSL 447
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBE_MOUSE (Tubulin epsilon chain OS=Mus musculus GN=Tube1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11 Identity = 38/137 (27.74%), Postives = 66/137 (48.18%), Query Frame = 3 Query: 63 EITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEAREDL 470 ++ + F + L + DPRH Y+AC ++ RG+V D+ + +K +QFV W G+K + PP ++ ++N T + + +F +Y K+A +H Y+ +GMEE F+EA L Sbjct: 321 QMFSDAFSKDHQLIQADPRHSLYLACALIVRGNVQISDLRRNIERLKP--ALQFVSWNQEGWKTSLCSVPP--------VGHSHSLLALANNTCVKPTFMELRERFTRLYKKKAHLHHYLQVDGMEESTFTEAVSSL 447
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 41/158 (25.95%), Postives = 79/158 (50.00%), Query Frame = 3 Query: 3 TSYAPI-ISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGME-EGEFSEAREDL 470 T Y P+ I + + SV ++ + +P N++ + GKY++ + +GDV P +++++ I+ KR F+DW P + ++ + P + ++ + M++N T++ S I ++D + K+AF+ Y E E EF ARE L Sbjct: 268 TGYTPLSIDRQTESVRKTSVLDVMRRLLQPQNIMVSAPTKTGKYISILNIIQGDVDPTQIHNSLQRIREKRMATFIDWGPASIQIALSKKSPYIKSSHKVSGL-----MLANHTSVNHLFSHIIQQYDKVRKKQAFLANYTRESGEILQEFDIAREML 420 The following BLAST results are available for this feature:
BLAST of CX300731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300731 ID=CX300731; Name=CX300731; organism=Citrus sinensis; type=EST; length=470bpback to top |