CX300731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_BOMMO (Tubulin alpha chain OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.608e-80 Identity = 136/155 (87.74%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACCM+YRGDVVPKDVN+A+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA3_RAT (Tubulin alpha-3 chain OS=Rattus norvegicus GN=Tuba3a PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.608e-80 Identity = 136/155 (87.74%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACCM+YRGDVVPKDVN+A+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA3_MOUSE (Tubulin alpha-3 chain OS=Mus musculus GN=Tuba3a PE=1 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.608e-80 Identity = 136/155 (87.74%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACCM+YRGDVVPKDVN+A+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA3C_HUMAN (Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C PE=1 SV=3) HSP 1 Score: 297.745 bits (761), Expect = 1.608e-80 Identity = 136/155 (87.74%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACCM+YRGDVVPKDVN+A+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA1_DROME (Tubulin alpha-1 chain OS=Drosophila melanogaster GN=alphaTub84B PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.608e-80 Identity = 136/155 (87.74%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACCM+YRGDVVPKDVN+A+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA2_STYLE (Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 2.101e-80 Identity = 137/155 (88.39%), Postives = 147/155 (94.84%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 S AP+ISAEKAYHEQLSV EITNS FEP++M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVP GDLA+V RAVCM+SN+TAIAE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPSGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 424
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_TETTH (Tubulin alpha chain OS=Tetrahymena thermophila PE=1 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 2.744e-80 Identity = 137/156 (87.82%), Postives = 148/156 (94.87%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAPIISAEKAYHEQLSV EITNS FEP+NM+ KCDPRHGKYMAC MMYRGDVVPKDVN+++ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLA+V RAVCM+SN+TAIAE SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBAE_PHYPO (Tubulin alpha-2B chain OS=Physarum polycephalum GN=ALTBE PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 3.583e-80 Identity = 135/155 (87.10%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SYAP+ISAEKA+HEQLSV E+TN+VF+PS+M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVA IKTKRT+QFVDWCPTGFKCGINYQPP+VVPGGDLA+VQRA+CM+SNTTAIAE SRIDHKFDLMYAKRAFVHWYVGEGMEE EFSEAREDL Sbjct: 271 SYAPVISAEKAFHEQLSVAELTNTVFDPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAVIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRALCMISNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEVEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA8_CHICK (Tubulin alpha-8 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 3.583e-80 Identity = 136/155 (87.74%), Postives = 148/155 (95.48%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +Y+PIISAEKAYHEQLSV EITN+ FEPSN + KCDPRHGKYMACCM+YRGDVVPKDVN+A+A IKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 146 TYSPIISAEKAYHEQLSVSEITNACFEPSNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 300
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA2_ORYSJ (Tubulin alpha-2 chain OS=Oryza sativa subsp. japonica GN=TUBA PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 3.583e-80 Identity = 135/156 (86.54%), Postives = 149/156 (95.51%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISAEKAYHEQLSV EITNS FEPS+M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPP+VVPGGDLA+VQRAVCM+SN+T++ E SRID KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425 The following BLAST results are available for this feature:
BLAST of CX300731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300731 ID=CX300731; Name=CX300731; organism=Citrus sinensis; type=EST; length=470bpback to top |