CX300731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA4A_MACFA (Tubulin alpha-4A chain OS=Macaca fascicularis GN=TUBA4A PE=2 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 6.758e-79 Identity = 132/155 (85.16%), Postives = 148/155 (95.48%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACC++YRGDVVPKDVN+A+A IKTKR++QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+ Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA4A_HUMAN (Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 6.758e-79 Identity = 132/155 (85.16%), Postives = 148/155 (95.48%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACC++YRGDVVPKDVN+A+A IKTKR++QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+ Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA4A_BOVIN (Tubulin alpha-4A chain OS=Bos taurus GN=TUBA4A PE=1 SV=2) HSP 1 Score: 292.352 bits (747), Expect = 6.758e-79 Identity = 132/155 (85.16%), Postives = 148/155 (95.48%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACC++YRGDVVPKDVN+A+A IKTKR++QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+ Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA2_ELEIN (Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 PE=2 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 6.758e-79 Identity = 136/156 (87.18%), Postives = 146/156 (93.59%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAPIIS EKAYHEQ SV EITNSVFE S+++ KCDPRHGKYMACC+MYRGDVVPKDVN+AV +IKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+SN TA+AE SRID KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPIISVEKAYHEQHSVPEITNSVFESSSVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_XENLA (Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2 SV=2) HSP 1 Score: 291.967 bits (746), Expect = 8.826e-79 Identity = 131/155 (84.52%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQL+V +ITN+ FEP+N + KCDPRHGKYMACC++YRGDVVPKDVN+A+ATIKTKR++QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+ Sbjct: 271 TYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA8_RAT (Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba8 PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 8.826e-79 Identity = 134/155 (86.45%), Postives = 147/155 (94.84%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAPI+SAEKAYHEQLSV EIT+S FEP++ + KCDPRHGKYMACCM+YRGDVVPKDVN A+A IKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 TYAPIVSAEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_LEPDS (Tubulin alpha chain OS=Lepidoglyphus destructor PE=1 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 1.505e-78 Identity = 131/155 (84.52%), Postives = 148/155 (95.48%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+IS+EKAYHEQL+V EITN+ FEP+N + KCDPRHGKYMACC++YRGDVVPKDVN+A+A IKTKR++QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 TYAPVISSEKAYHEQLTVSEITNTCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 1.505e-78 Identity = 134/155 (86.45%), Postives = 147/155 (94.84%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACCM+YRGDVVPKDVN+A+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+ HKFDLMYAK AFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_NOTVI (Tubulin alpha chain OS=Notophthalmus viridescens PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 1.966e-78 Identity = 131/155 (84.52%), Postives = 147/155 (94.84%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACC++YRGDVVPKDVN+A+A IKTKR++QFVDWCPTGFK GINYQPPT VPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+ Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 1.966e-78 Identity = 131/155 (84.52%), Postives = 147/155 (94.84%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N + KCDPRHGKYMACC++YRGDVVPKDVN+A+ATIKTKR++QFVDWCPTGFK GINYQPPT VPGGDLA+V RAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEF+EAREDL Sbjct: 271 TYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVSRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 425 The following BLAST results are available for this feature:
BLAST of CX300731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300731 ID=CX300731; Name=CX300731; organism=Citrus sinensis; type=EST; length=470bpback to top |