CX300726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_CANMA (40S ribosomal protein S13 OS=Candida maltosa GN=RPS13 PE=3 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 1.044e-59 Identity = 107/143 (74.83%), Postives = 126/143 (88.11%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYES 491 MGRMHS GKGIS+SA+PY R PSW K+SS +V + + K+A+KGLTPSQIGVILRD+HG++Q K VTG+K+LRILK++GLAPE+PEDLY LIKKAVA+RKHLERNRKDKDSKFRLIL+ESRIHRLARYY+ LPP WKYES Sbjct: 1 MGRMHSAGKGISSSAIPYSRNAPSWFKLSSDEVVEQVIKYARKGLTPSQIGVILRDAHGVSQAKIVTGNKVLRILKSNGLAPELPEDLYFLIKKAVAVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTVSVLPPNWKYES 143
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_SCHPO (40S ribosomal protein S13 OS=Schizosaccharomyces pombe GN=rps13 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 3.039e-59 Identity = 106/143 (74.13%), Postives = 126/143 (88.11%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYES 491 MGRMHS+GKGI++SALPY R+PP+W K + V + I KF+KKG++PSQIGV LRDSHGI QV+ +TG KI+RILKA+GLAPE+PEDLY+LIKKAV++RKHLERNRKDKDSKFRLIL+ESRIHRLARYY+K LPP WKYES Sbjct: 1 MGRMHSKGKGIASSALPYVRSPPAWCKADADSVVEQILKFSKKGMSPSQIGVTLRDSHGIPQVRFITGQKIMRILKANGLAPELPEDLYNLIKKAVSVRKHLERNRKDKDSKFRLILIESRIHRLARYYRKVGALPPTWKYES 143
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_DROME (40S ribosomal protein S13 OS=Drosophila melanogaster GN=RpS13 PE=2 SV=3) HSP 1 Score: 227.254 bits (578), Expect = 3.039e-59 Identity = 109/144 (75.69%), Postives = 126/144 (87.50%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYEST 494 MGRMH+ GKGIS SALPY+RT PSWLK+++ DV++ I K KKGLTPS+IG+ILRDSHG+AQV+ V G+KILRI+K+ GL P+IPEDLYH+IKKAVAIRKHLERNRKDKD KFRLILVESRIHRLARYYK LPP WKYES+ Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVLPPNWKYESS 144
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_CIOIN (40S ribosomal protein S13 OS=Ciona intestinalis GN=RPS13 PE=2 SV=3) HSP 1 Score: 226.868 bits (577), Expect = 3.969e-59 Identity = 109/143 (76.22%), Postives = 127/143 (88.81%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYES 491 MGRMH+ GKG+S+SALPY+R+ P+WLK+SS+DV++ I K AKKGL PSQIGVILRDSHG AQV+ VTG++ILR+LKA GLAP++PED+YHLIKKAVA+RKHLERNRKD DSKFRLILVESRIHRL RYYK LPP WKYES Sbjct: 1 MGRMHAPGKGLSSSALPYRRSVPTWLKLSSEDVKEQIYKLAKKGLRPSQIGVILRDSHGXAQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKAVAMRKHLERNRKDTDSKFRLILVESRIHRLGRYYKTKGVLPPNWKYES 143
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_PLUXY (40S ribosomal protein S13 OS=Plutella xylostella GN=RpS13 PE=2 SV=3) HSP 1 Score: 226.098 bits (575), Expect = 6.769e-59 Identity = 109/144 (75.69%), Postives = 127/144 (88.19%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYEST 494 MGRMH+ GKGIS SALPY+R+ P+WLK+++ DV++ I K KKGLTPSQIGV+LRDSHG+AQV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+ KHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WKYES+ Sbjct: 1 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMGKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESS 144
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_CHOPR (40S ribosomal protein S13 OS=Choristoneura parallela GN=RpS13 PE=2 SV=3) HSP 1 Score: 225.713 bits (574), Expect = 8.841e-59 Identity = 109/144 (75.69%), Postives = 126/144 (87.50%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYEST 494 MGRMH+ GKGIS SALPY+R+ P+WLK+++ DV++ I K KKGLTPSQIGV LRDSHG+ QV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WKYES+ Sbjct: 1 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVKLRDSHGVVQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESS 144
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_YEAST (40S ribosomal protein S13 OS=Saccharomyces cerevisiae GN=RPS13 PE=1 SV=3) HSP 1 Score: 223.787 bits (569), Expect = 3.360e-58 Identity = 103/143 (72.03%), Postives = 126/143 (88.11%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYES 491 MGRMHS GKGIS+SA+PY R P+W K+SS+ V + I K+A+KGLTPSQIGV+LRD+HG+ Q + +TG+KI+RILK++GLAPEIPEDLY+LIKKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYY+ LPP WKYES Sbjct: 1 MGRMHSAGKGISSSAIPYSRNAPAWFKLSSESVIEQIVKYARKGLTPSQIGVLLRDAHGVTQARVITGNKIMRILKSNGLAPEIPEDLYYLIKKAVSVRKHLERNRKDKDAKFRLILIESRIHRLARYYRTVAVLPPNWKYES 143
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_AGABI (40S ribosomal protein S13 OS=Agaricus bisporus GN=RPS13 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 3.360e-58 Identity = 106/143 (74.13%), Postives = 127/143 (88.81%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYES 491 MGRMH+ GKGIS+SALPY+RTPPSWLK +S++V + I K A+KGLTPSQIGV LR+SHGI QV+ VTG+KILRILK+ GL P IPEDL+HLIKKAVA+RKH+E NRKDKDSKFRLIL+ESRIHRLARYYK +++PP +KY+S Sbjct: 1 MGRMHAPGKGISSSALPYRRTPPSWLKTTSEEVVEQIVKLARKGLTPSQIGVTLRNSHGIPQVRFVTGNKILRILKSQGLGPSIPEDLWHLIKKAVAVRKHMETNRKDKDSKFRLILIESRIHRLARYYKTKQQIPPTFKYDS 143
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_ANOGA (40S ribosomal protein S13 OS=Anopheles gambiae GN=RpS13 PE=2 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 9.775e-58 Identity = 107/144 (74.31%), Postives = 126/144 (87.50%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYEST 494 MGRMH+ GKGIS SALPY+R+ PSWLK+S++DV++ I K KKG+TPSQIG+ILRDSHG+AQV+ V G+K+LRI+KA GL P+IPEDLY LIKKAV+IRKHLERNRKD DSKFRLIL+ESRIHRLARYYK LPP WKYES+ Sbjct: 1 MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGVAQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIESRIHRLARYYKIKAVLPPNWKYESS 144
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_CAEEL (40S ribosomal protein S13 OS=Caenorhabditis elegans GN=rps-13 PE=2 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 2.844e-57 Identity = 102/143 (71.33%), Postives = 126/143 (88.11%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYES 491 MGRMH+ GKG++ SA+PY+R+ PSW K+++++V+D I K AKKGL PSQIGVILRDSHG+ QV+ + G+KI RILK+ G+APE+PEDLYHL+KKAVAIRKHLER+RKD DSK+RLILVESRIHRLARYYK ++LPP WKYES Sbjct: 1 MGRMHNPGKGMAKSAIPYRRSVPSWQKMTAEEVQDQIVKMAKKGLRPSQIGVILRDSHGVGQVRRLAGNKIFRILKSKGMAPELPEDLYHLVKKAVAIRKHLERSRKDIDSKYRLILVESRIHRLARYYKTKRQLPPTWKYES 143 The following BLAST results are available for this feature:
BLAST of CX300726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300726 ID=CX300726; Name=CX300726; organism=Citrus sinensis; type=EST; length=495bpback to top |