CX300726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_UNCMA (30S ribosomal protein S15P/S13e OS=Uncultured methanogenic archaeon RC-I GN=rps15p PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 3.166e-32 Identity = 64/141 (45.39%), Postives = 91/141 (64.54%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 485 M +MH+R KG S S P ++TPP+W +S ++VE + K + T SQ+G+ILRD +G+ + VTG K+ ILK +G P++PEDL +LIKKA+ + KHL+ N KD +K L L ES++ RL +YY T LP W Y Sbjct: 1 MAKMHTRRKGRSRSTRPVRKTPPAWFTMSKEEVEKLVVKTYGQNATTSQVGIILRDKYGVPDITQVTGKKVTAILKENGTGPKLPEDLVNLIKKAIRLHKHLDENHKDLHNKRALQLTESKVRRLVKYYHATGVLPMDWVY 141
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_ARCFU (30S ribosomal protein S15P/S13e OS=Archaeoglobus fulgidus GN=rps15p PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 5.401e-32 Identity = 68/141 (48.23%), Postives = 95/141 (67.38%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 485 M R+H+R +G S S Y+ +PP W+ +S ++VE + + +G PS IG+ILRD +GI VK VTG KI +ILK HG+ + PEDL LIKKA+ +R HLE +RKDK ++ L L+E++I RL+ YYK+ LP WKY Sbjct: 1 MARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSYYKEKGVLPADWKY 141
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_PYRIL (30S ribosomal protein S15P/S13e OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps15p PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.213e-32 Identity = 67/133 (50.38%), Postives = 92/133 (69.17%), Query Frame = 3 Query: 87 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 485 KG S S P T P+W++ + +VE + + A++G PSQIG+ILRD +GI VK +TG K+ +IL+ HG+ EIPEDL +LIK+A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ KLP + Y Sbjct: 9 KGRSRSVRPAHPTVPTWIQYTPDEVEQLVVELARRGFPPSQIGIILRDQYGIPLVKPITGKKLTKILEEHGIRQEIPEDLLNLIKRALRIRKHLEEHPKDMASRRGLQLVESKIHRLIKYYKRVGKLPKEFVY 141
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_METLZ (30S ribosomal protein S15P/S13e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps15p PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.213e-32 Identity = 64/142 (45.07%), Postives = 97/142 (68.31%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 M RMH+R +GI++S PY++ P+W +++E I + K GLT +QIG++LRD HG+ VK TG +I I++ + L +IPEDL +L+ KA+ +RKHLE+NRKD +K +L L E+++ RL +YY TK+LP W Y+ Sbjct: 1 MARMHARRRGIASSVRPYRKEVPAWSNSDVKEIEGKIVELRKAGLTCAQIGLVLRDKHGVPNVKLATGKRINAIVRENDLDTDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEAKVRRLVKYYVGTKRLPLGWVYK 142
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_SULTO (30S ribosomal protein S15P/S13e OS=Sulfolobus tokodaii GN=rps15p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.571e-31 Identity = 67/136 (49.26%), Postives = 93/136 (68.38%), Query Frame = 3 Query: 81 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 R G S S P + P W++ + ++VE + + AKKG +PS IG+ILRD +GI VK +TG K+ +IL+ GLAP+IPEDL++LI+KA +R+HL + KDK +K L +ES+I RLA YYK+ KLP WKYE Sbjct: 5 RPNGKSHSTRPVRSGAPKWVRFTREEVELLVEELAKKGYSPSMIGIILRDQYGIPLVKQITGKKLTKILEEKGLAPKIPEDLFNLIRKAANVRRHLFEHPKDKRAKKGLEEIESKIRRLADYYKRIGKLPKEWKYE 140
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_PYRAE (30S ribosomal protein S15P/S13e OS=Pyrobaculum aerophilum GN=rps15p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.571e-31 Identity = 65/133 (48.87%), Postives = 94/133 (70.68%), Query Frame = 3 Query: 87 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 485 KG S S P T P+W++ + ++VE + + A++G PSQIG+ILRD +GI V+ +TG K+ +IL+ HG+ E+PEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ KLPP + Y Sbjct: 9 KGRSRSVRPAHPTVPTWIQYTPEEVEQLVVELARRGFQPSQIGLILRDQYGIPLVRPITGKKLTKILEEHGIKYELPEDLLNLIRRALRIRKHLEEHPKDMASRRGLQLVESKIHRLVKYYKRVGKLPPDFVY 141
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_PYRAB (30S ribosomal protein S15P/S13e OS=Pyrococcus abyssi GN=rps15p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.571e-31 Identity = 71/149 (47.65%), Postives = 95/149 (63.76%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 M RMH+R +G S S P + PP WL+ + +D+E+ + K K+G + + IG ILRD +GI VK I RIL+ HGLAPEIPEDL LIK+AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKDWRYD 149
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_PYRAR (30S ribosomal protein S15P/S13e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps15p PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.681e-31 Identity = 64/133 (48.12%), Postives = 94/133 (70.68%), Query Frame = 3 Query: 87 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 485 KG S S P T P+W++ + ++VE + A++G PSQIG++LRD +GI VKS+TG K++++L+ HG+ EIPEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ +LP + Y Sbjct: 12 KGRSGSVRPAHPTVPTWIQYTPEEVEQLAVELARRGFQPSQIGIVLRDQYGIPLVKSITGKKLVKVLEEHGIKYEIPEDLLNLIRRALRIRKHLEEHPKDMSSRRGLQLVESKIHRLIKYYKRVGRLPRDFVY 144
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_SULSO (30S ribosomal protein S15P/S13e OS=Sulfolobus solfataricus GN=rps15p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.972e-31 Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 3 Query: 81 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 R KG S S P + P W++++ ++VE + + AK+G TPS IG+ILRD +GI VK + G K+ +IL+ GLAP+IPEDL++LI+KAV +R+H+ +DK +K L +ES+I RL RYYK KLP W Y+ Sbjct: 5 RAKGKSHSIRPARAGAPKWVRLTREEVEMLVEELAKRGYTPSMIGIILRDQYGIPLVKQIVGKKVTQILEERGLAPQIPEDLFNLIRKAVNVRRHINEYPRDKTAKKGLEEIESKIRRLTRYYKGIGKLPQEWVYD 140
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_NITMS (30S ribosomal protein S15P/S13e OS=Nitrosopumilus maritimus (strain SCM1) GN=rps15p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.972e-31 Identity = 63/143 (44.06%), Postives = 95/143 (66.43%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYES 491 MGRMH+ G S S P PSW+ S ++E+ + K++K GLTPSQIG+ LRD H I +K +T I IL+ + L E+PEDL +++KKAV +++HL+ N+ D+ + L L+E+++HRL+ YYKK ++P WKY+S Sbjct: 1 MGRMHTHRHGKSHSIRPATLRAPSWITQSPAEIEELVIKYSKDGLTPSQIGIKLRDQHSIPLIKPITKKTIGEILEENDLKAEMPEDLENIVKKAVGLQRHLKENKGDRRNVRSLELIEAKVHRLSVYYKKIGRIPATWKYKS 143 The following BLAST results are available for this feature:
BLAST of CX300726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300726 ID=CX300726; Name=CX300726; organism=Citrus sinensis; type=EST; length=495bpback to top |