CX300726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_METMP (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis GN=rps15p PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.055e-30 Identity = 62/141 (43.97%), Postives = 89/141 (63.12%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 485 M R+HS +G S S P + P W+ +S++D+E I + AK G + IG ILRD +G+ VK +TG + I+K G E+PEDL++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y Sbjct: 1 MARLHSGKRGSSGSTRPLRTEVPEWVSMSAEDIEAKIVEMAKDGKQSAIIGNILRDMYGVPNVKLITGKSVSSIMKEAGFYAEVPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRY 141
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_SULAC (30S ribosomal protein S15P/S13e OS=Sulfolobus acidocaldarius GN=rps15p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 8.623e-30 Identity = 63/136 (46.32%), Postives = 91/136 (66.91%), Query Frame = 3 Query: 81 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 R KG S S P + PP W++ + ++VE + + AK+G PS IG++LRD +G+ VK +TG K+ IL+ + P+IPEDL++L+++AV IR+HL KDK +K L VES+I RLA YYK+T KLP W Y+ Sbjct: 5 RAKGNSHSIRPVRSGPPKWVRFTREEVELLVEELAKRGYPPSMIGMVLRDQYGVPLVKQITGRKLTAILQDRNMKPKIPEDLFNLMRRAVNIRRHLFEYPKDKSAKRGLEEVESKIRRLASYYKETGKLPQEWSYD 140
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_METS5 (30S ribosomal protein S15P/S13e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps15p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.471e-29 Identity = 63/136 (46.32%), Postives = 89/136 (65.44%), Query Frame = 3 Query: 81 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 R G S S P + P W++ S ++VE I + AKKG TPS IG++LRD +GI K + G K+ + LK GLA +IPEDL++LI++AV +R+HL DK +K L +ES+I RL+RYYK+ +KLP W Y+ Sbjct: 5 RANGSSHSTRPVRTGSPKWVRFSREEVEMLIEELAKKGYTPSMIGIVLRDQYGIPLAKPIIGKKVNQFLKDKGLASQIPEDLFNLIRRAVNVRRHLNEYPGDKTAKKGLEEIESKIRRLSRYYKRVEKLPQDWTYD 140
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_METM5 (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps15p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.471e-29 Identity = 61/141 (43.26%), Postives = 89/141 (63.12%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 485 M R+HS +G S S P + P W+ +S++++E I + AK G + IG ILRD +G+ VK +TG + I+K G E+PEDL++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y Sbjct: 1 MARLHSGKRGSSGSTRPLRTEVPEWVSMSAEEIEAKIVEMAKDGKQSAIIGNILRDMYGVPNVKLITGKSVSSIMKEAGFYAEVPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRY 141
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS13_ENCCU (40S ribosomal protein S13 OS=Encephalitozoon cuniculi GN=RPS13 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 4.280e-29 Identity = 60/140 (42.86%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 482 M +MHS GKG S S PY P+WL S +++ ++ + KG+ IG LRD +GI + V G I R L+ +G+ P+IP DL L+ +A +R HL RKD +K+RLILV SR++R+ARYYK+ ++P WK Sbjct: 1 MAKMHSSGKGRSGSVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGIGKASDVLGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVSSRMYRVARYYKRKMRIPGNWK 140
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_AERPE (30S ribosomal protein S15P/S13e OS=Aeropyrum pernix GN=rps15p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.589e-29 Identity = 64/136 (47.06%), Postives = 87/136 (63.97%), Query Frame = 3 Query: 81 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 R KG S S P PP WL + +++E I + AKKG PS IG+ILRD +GI VK + G + +L+ GL P +PEDL LI+KAV +R+HL+ + KD +K LI +ES+I RL +YYK+ LPP WKY+ Sbjct: 5 REKGQSHSTRPPHPQPPQWLVFTPEEIELLIAELAKKGYGPSMIGIILRDQYGIPLVKPILGKGVSEVLREKGLHPPLPEDLLMLIRKAVNLRRHLDEHPKDYHAKKGLIDLESKIRRLVKYYKRRGVLPPDWKYD 140
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_METMJ (30S ribosomal protein S15P/S13e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps15p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.300e-29 Identity = 58/142 (40.85%), Postives = 91/142 (64.08%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 M RM++R +G S+S PY++ P W + ++E + K G++ SQIG++LRD + + VK TG +I IL+ GL EIPEDL +L++KA+ IRKHL N KD +K +L + ES++ RL +YY ++ ++P W Y+ Sbjct: 1 MARMYARRRGTSSSVRPYRKEAPEWSNTDATEIEKIVVDLRKDGMSTSQIGLVLRDRYAVPDVKLATGKRIGEILREKGLESEIPEDLRNLMEKALGIRKHLAENNKDVHNKRQLQIAESKVRRLVKYYVRSGRMPKGWTYK 142
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_METBF (30S ribosomal protein S15P/S13e OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps15p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 9.534e-29 Identity = 61/142 (42.96%), Postives = 91/142 (64.08%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 M +MH++ KG S+S P + PP W KI +++V K+G++ ++IG+ LRD +G+ K +TG KI ILK + + P +PEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YY++ K LP W Y+ Sbjct: 1 MAKMHTKRKGKSSSTRPIRTEPPEWCKIGAEEVTTITLDLWKQGVSTAEIGMTLRDRYGVPDAKLITGKKITTILKENNVYPNVPEDLTNLIVKALRLRKHLSVNKKDVHNKRALNLTESKIRRLVKYYQQEKVLPRDWFYK 142
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_HYPBU (30S ribosomal protein S15P/S13e OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps15p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.626e-28 Identity = 62/136 (45.59%), Postives = 86/136 (63.24%), Query Frame = 3 Query: 81 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 R KG S S P T P W++ +++E+ I A+KG PS IG+ILRD GI VK + G I +L+ G+ +PEDL+ LI+KAV +R+HLE + KD +K L+ +ES+I RLA YYK+ KLP WKY+ Sbjct: 6 RKKGRSHSTRPATPTVPKWIQYDPEEIEEIIVDLARKGYGPSMIGIILRDQFGIPLVKPILGKSITEVLEERGIKMVVPEDLFRLIEKAVNLRRHLEEHPKDTHAKKGLLDLESKIRRLAEYYKRVGKLPRDWKYD 141
BLAST of CX300726 vs. ExPASy Swiss-Prot
Match: RS15_METBU (30S ribosomal protein S15P/S13e OS=Methanococcoides burtonii (strain DSM 6242) GN=rps15p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.774e-28 Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3 Query: 63 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 488 M +MH+R KG S S P + P+W +++++ + K+G + S IG++LRD++G+ VK TG K+ IL+ + P +PEDLY+LI KA+ +RKHL N KD +K L ES+I RL +YY+ TK LP WKY+ Sbjct: 1 MAKMHTRTKGKSGSTKPIRSESPAWSTATTEEITKVVLDLWKQGNSTSVIGMVLRDNYGVPDVKLATGKKVTEILRDNSEEPNVPEDLYNLIVKAIGLRKHLVVNNKDVHNKRSLQSAESKIRRLVKYYQSTKVLPIDWKYK 142 The following BLAST results are available for this feature:
BLAST of CX300726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300726 ID=CX300726; Name=CX300726; organism=Citrus sinensis; type=EST; length=495bpback to top |