CX300722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS5_METKA (30S ribosomal protein S5P OS=Methanopyrus kandleri GN=rps5p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.610e-28 Identity = 64/134 (47.76%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGY--WGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTT-----GHSRTRGNLAMAVYHAL 384 +G+R RF+ + VG+ +G +G+G AREV AIR I AK+N++ VRRG W G+PH++P +++GKCGSVR+ L PAPRG+G+VA +K+L MAGIEDV++ TT G +RT N A A + AL Sbjct: 67 SGRRVRFRVTVVVGNKDGFVGVGQGKAREVGPAIRAAIDRAKLNIIKVRRGCGSWECGCGRPHSIPFEITGKCGSVRITLKPAPRGTGLVAGETAQKVLEMAGIEDVWTKTTGGKGKGETRTTINFAKATFDAL 200
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS5_PYRFU (30S ribosomal protein S5P OS=Pyrococcus furiosus GN=rps5p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28 Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGY--WGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKT 393 +G+R RF+ AVG+ +G++GLG+ +EV AIR I AK+N++ ++RG W +PH+VP V GK GSVRVRLIP PRG G+V V KK+L +AG++DV+S T G +RT N A AV++AL T Sbjct: 77 SGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTVNFAKAVFNALYNT 208
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS5_PYRKO (30S ribosomal protein S5P OS=Pyrococcus kodakaraensis GN=rps5p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.452e-28 Identity = 63/132 (47.73%), Postives = 89/132 (67.42%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGY--WGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKT 393 +G+R RF+ AVG+ +G++GLG+ REV AIR I AKMN++ ++RG W +PH++P V GK GSVRV+L+P PRG G+V V KK+L +AG++DV+S T G +RT N A AV++AL T Sbjct: 76 SGRRIRFRVLAAVGNRDGYVGLGIGHGREVGIAIRKAINYAKMNIIEIKRGCGSWECRCRRPHSIPFAVEGKEGSVRVKLMPGPRGLGLVIGDVGKKILTLAGVQDVWSQTLGETRTTVNFAKAVFNALYNT 207
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS5_METS5 (30S ribosomal protein S5P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps5p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.452e-28 Identity = 64/142 (45.07%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGY--WGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWA 423 AG+ +R+K + +G+ +G++ +GV ++++ AI+ I +AKM+++PVRRG W G+ H++P VSGK GS V L PAP+G+G+VA V K LL AGI+DV+S + G +RT N MA Y AL TY F+TP WA Sbjct: 70 AGELSRYKVLVVMGNYDGYVSIGVGKSKQLRVAIQKAIRDAKMHVIPVRRGCGSWECTCGESHSLPFLVSGKSGSAEVVLRPAPKGTGLVAGGVLKTLLTYAGIKDVWSFSRGETRTTDNFIMAGYRALYNTYKFVTPVDWA 211
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS5_THEAC (30S ribosomal protein S5P OS=Thermoplasma acidophilum GN=rps5p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.594e-28 Identity = 59/132 (44.70%), Postives = 89/132 (67.42%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGY--WGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKT 393 +G+R + + VG+G+G++GLG+ ++E A AIR +INAK+N++ +RRG W G+ HT+P V GK GSVR+ L PAPRG G+ V + +L++AGIED + GH++T N A+AVY+AL +T Sbjct: 62 SGRRMTYSITVVVGNGDGYVGLGIGRSKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVQGKSGSVRITLKPAPRGVGLAVGDVARTILSIAGIEDAWGFAAGHTKTTVNYALAVYNALKET 193
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS5_THEVO (30S ribosomal protein S5P OS=Thermoplasma volcanium GN=rps5p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.692e-27 Identity = 61/132 (46.21%), Postives = 87/132 (65.91%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGY--WGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKT 393 +G+R + + VG+ +G+IGLG+ ++E A AIR +INAK+N++ +RRG W G+ HT+P V GK GSVR+ L PAPRG G+ V K +L MAGIED + GH++T N A+AVY+AL +T Sbjct: 62 SGRRMTYSITVVVGNEDGYIGLGIGRSKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVEGKSGSVRITLKPAPRGVGLAVGNVAKIILRMAGIEDAWGFAAGHTKTTVNYALAVYNALKET 193
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS5_METS3 (30S ribosomal protein S5P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps5p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.210e-27 Identity = 66/134 (49.25%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGY--WGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYS 399 +G++ F+ +AVG+ NG++GLG A+EV AIR + NAK NL+ VRRG WG G+ HTVP KV GK SV V L+PAP G G+V V K +LN+AGI+DV+S + G ++T N A A++ AL KT S Sbjct: 65 SGRKVNFRVIVAVGNKNGYVGLGQGKAKEVGPAIRKAVDNAKYNLIKVRRGCGDWGCVCGKEHTVPFKVQGKASSVSVSLMPAPAGVGLVVGDVGKTILNLAGIKDVWSQSFGQTQTTVNFANAIFDAL-KTLS 197
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS5_METTH (30S ribosomal protein S5P OS=Methanobacterium thermoautotrophicum GN=rps5p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.886e-27 Identity = 63/131 (48.09%), Postives = 87/131 (66.41%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGY--WGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSK 390 +G++ F+ +AVG+ +G++GLG AREV AIR + +AK N++ VRRG WG G+ HTVP KVSGK GSVRV LIPAP G G+ V K ++ +AGI+DV+S T G ++T N A A + AL + Sbjct: 67 SGRKVNFRVIVAVGNKDGYVGLGQGKAREVGPAIRKAVDDAKFNIIKVRRGCGDWGCVCGREHTVPFKVSGKSGSVRVTLIPAPGGVGLAIGDVGKTIMRLAGIDDVWSHTRGQTQTTVNFARATFDALKQ 197
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS5_METJA (30S ribosomal protein S5P OS=Methanocaldococcus jannaschii GN=rps5p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.886e-27 Identity = 59/129 (45.74%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGY--WGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHAL 384 +G+R RF+ + VG+ NG++G+G A+EV AIR I AK N++ V+RG W G PH++P K GKCGS + ++PAP+G G+VA V K +L +AGI+DV++ T G +RT N AMA + AL Sbjct: 65 SGRRARFRATVVVGNRNGYVGVGKGKAKEVGPAIRKAIAQAKKNIIRVKRGCGSWECGCGTPHSIPYKGYGKCGSTAIEILPAPKGVGLVAGDVAKAVLGLAGIKDVWTKTFGETRTTYNFAMATFEAL 193
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS5_METTP (30S ribosomal protein S5P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps5p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.769e-27 Identity = 64/132 (48.48%), Postives = 88/132 (66.67%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGY--WGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKT 393 +G+R +F+ + VG+ +G+IG+G +V AI+ GI NAK+N+V + RG W GQ HTVP KVSG GSVR+ L+PAPRG G+ A V KK++ MAGI+DV++ T G +RT N A A Y+AL T Sbjct: 67 SGRRVKFRTTVIVGNRDGYIGIGHGKDVQVGGAIKKGIENAKLNVVRINRGCGSWECGCGQAHTVPYKVSGSSGSVRIYLMPAPRGLGLAAGDVAKKVMEMAGIKDVWTRTEGSTRTTLNFAKATYNALLNT 198 The following BLAST results are available for this feature:
BLAST of CX300722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300722 ID=CX300722; Name=CX300722; organism=Citrus sinensis; type=EST; length=607bpback to top |