CX300681

Overview
NameCX300681
Unique NameCX300681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM2_BRALA (Calmodulin-2 OS=Branchiostoma lanceolatum GN=CAM2 PE=2 SV=3)

HSP 1 Score: 283.878 bits (725), Expect = 4.246e-76
Identity = 140/149 (93.96%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEM+READIDGDGQ+NYEEFV+MM SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMVREADIDGDGQVNYEEFVEMMTSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_LOCMI (Calmodulin OS=Locusta migratoria PE=1 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 5.545e-76
Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV MM SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_DROME (Calmodulin OS=Drosophila melanogaster GN=Cam PE=1 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 5.545e-76
Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV MM SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_APLCA (Calmodulin OS=Aplysia californica GN=CAM PE=2 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 5.545e-76
Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV MM SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALMA_HALRO (Calmodulin-A OS=Halocynthia roretzi PE=1 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 5.545e-76
Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV MM SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM1_BRALA (Calmodulin-1 OS=Branchiostoma lanceolatum PE=2 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 5.545e-76
Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV MM SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM1_BRAFL (Calmodulin-1 OS=Branchiostoma floridae PE=2 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 5.545e-76
Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV MM SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_HETTR (Calmodulin OS=Heterocapsa triquetra PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 9.459e-76
Identity = 137/149 (91.95%), Postives = 148/149 (99.33%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVD+DGNGTIDFPEFL++MARKMKDTD+EEE++EAFKVFD+DGNGFISAAELRH+MTNLGEKL+DEEVDEMIREAD+DGDGQINYEEFVKMMM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDSDGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 1.235e-75
Identity = 140/149 (93.96%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNG+ISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV MM SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_CIOIN (Calmodulin OS=Ciona intestinalis PE=2 SV=3)

HSP 1 Score: 282.337 bits (721), Expect = 1.235e-75
Identity = 139/149 (93.29%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREAD+DGDGQ+NYEEFV MM +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVNMMTNK 149
The following BLAST results are available for this feature:
BLAST of CX300681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
CALM2_BRALA4.246e-7693.96Calmodulin-2 OS=Branchiostoma lanceolatum GN=CAM2 ... [more]
CALM_LOCMI5.545e-7694.63Calmodulin OS=Locusta migratoria PE=1 SV=2[more]
CALM_DROME5.545e-7694.63Calmodulin OS=Drosophila melanogaster GN=Cam PE=1 ... [more]
CALM_APLCA5.545e-7694.63Calmodulin OS=Aplysia californica GN=CAM PE=2 SV=2[more]
CALMA_HALRO5.545e-7694.63Calmodulin-A OS=Halocynthia roretzi PE=1 SV=2[more]
CALM1_BRALA5.545e-7694.63Calmodulin-1 OS=Branchiostoma lanceolatum PE=2 SV=... [more]
CALM1_BRAFL5.545e-7694.63Calmodulin-1 OS=Branchiostoma floridae PE=2 SV=2[more]
CALM_HETTR9.459e-7691.95Calmodulin OS=Heterocapsa triquetra PE=2 SV=1[more]
CALM_STIJA1.235e-7593.96Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]
CALM_CIOIN1.235e-7593.29Calmodulin OS=Ciona intestinalis PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC08001A12SK PhyRootSw1 Citrus sinensis cDNA clone C08001A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300681 ID=CX300681; Name=CX300681; organism=Citrus sinensis; type=EST; length=598bp
ATCACAAGATACCCTCCTCCTAACACTCCATAACTTAAATACATTAAAAT
GGCTGATCAATTAACTGAAGAGCAAATTGCTGAGTTCAAGGAAGCATTCT
CCTTATTCGACAAGGACGGAGATGGAACCATCACCACCAAGGAGTTAGGA
ACTGTCATGAGATCTCTTGGTCAGAACCCAACTGAGGCTGAGTTAGCTGA
TATGATCAACGAAGTCGATGCTGATGGCAACGGAACCATCGATTTCCCTG
AGTTCTTAACCATGATGGCCCGCAAGATGAAGGATACTGACTCTGAGGAG
GAAATCCTTGAAGCTTTCAAGGTCTTCGACAAGGACGGCAATGGATTCAT
CTCTGCCGCTGAGTTAAGACACATCATGACCAACTTAGGAGAGAAGTTGT
CGGATGAGGAAGTCGACGAAATGATCCGTGAAGCTGATATTGACGGGGAT
GGTCAGATCAACTACGAAGAGTTCGTCAAGATGATGATGTCCAAGTAAAT
CGTTTGATGACGTCATAAGAGTGTTTCCTCTGAGTGATGCACGCGGTGCG
GGTATAGCGAAGAGGATCACATAGATTATATTGAGACAAATCATTATA
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