CX300681

Overview
NameCX300681
Unique NameCX300681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4997 contig Csv1_Contig4997:16..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 282.337 bits (721), Expect = 1.235e-75
Identity = 140/149 (93.96%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV MM +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_ACHKL (Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3)

HSP 1 Score: 282.337 bits (721), Expect = 1.235e-75
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEA SLFDKDGDGTITTKELGTVMRS+GQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAF+ FDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQINYEEFVKMMMSK
Sbjct:    1 MADQLTEEQIAEFKEAGSLFDKDGDGTITTKELGTVMRSVGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFQGFDKDGNGFISAAELRHMMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_XENLA (Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 1.613e-75
Identity = 139/149 (93.29%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNG+ISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV+MM +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_TORCA (Calmodulin OS=Torpedo californica PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 1.613e-75
Identity = 139/149 (93.29%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNG+ISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV+MM +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_SHEEP (Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3)

HSP 1 Score: 281.952 bits (720), Expect = 1.613e-75
Identity = 139/149 (93.29%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNG+ISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV+MM +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 1.613e-75
Identity = 140/149 (93.96%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADG+GTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDG+GFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFVKMM SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_RAT (Calmodulin OS=Rattus norvegicus GN=Calm1 PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 1.613e-75
Identity = 139/149 (93.29%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNG+ISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV+MM +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_RABIT (Calmodulin OS=Oryctolagus cuniculus GN=CALM PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 1.613e-75
Identity = 139/149 (93.29%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNG+ISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV+MM +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_PONAB (Calmodulin OS=Pongo abelii GN=CALM PE=2 SV=3)

HSP 1 Score: 281.952 bits (720), Expect = 1.613e-75
Identity = 139/149 (93.29%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNG+ISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV+MM +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_PERFV (Calmodulin OS=Perca flavescens GN=calm PE=2 SV=3)

HSP 1 Score: 281.952 bits (720), Expect = 1.613e-75
Identity = 139/149 (93.29%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNG+ISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV+MM +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
The following BLAST results are available for this feature:
BLAST of CX300681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
CALM_CAEEL1.235e-7593.96Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1... [more]
CALM_ACHKL1.235e-7595.30Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3[more]
CALM_XENLA1.613e-7593.29Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2[more]
CALM_TORCA1.613e-7593.29Calmodulin OS=Torpedo californica PE=1 SV=2[more]
CALM_SHEEP1.613e-7593.29Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3[more]
CALM_RENRE1.613e-7593.96Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_RAT1.613e-7593.29Calmodulin OS=Rattus norvegicus GN=Calm1 PE=1 SV=2[more]
CALM_RABIT1.613e-7593.29Calmodulin OS=Oryctolagus cuniculus GN=CALM PE=1 S... [more]
CALM_PONAB1.613e-7593.29Calmodulin OS=Pongo abelii GN=CALM PE=2 SV=3[more]
CALM_PERFV1.613e-7593.29Calmodulin OS=Perca flavescens GN=calm PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC08001A12SK PhyRootSw1 Citrus sinensis cDNA clone C08001A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300681 ID=CX300681; Name=CX300681; organism=Citrus sinensis; type=EST; length=598bp
ATCACAAGATACCCTCCTCCTAACACTCCATAACTTAAATACATTAAAAT
GGCTGATCAATTAACTGAAGAGCAAATTGCTGAGTTCAAGGAAGCATTCT
CCTTATTCGACAAGGACGGAGATGGAACCATCACCACCAAGGAGTTAGGA
ACTGTCATGAGATCTCTTGGTCAGAACCCAACTGAGGCTGAGTTAGCTGA
TATGATCAACGAAGTCGATGCTGATGGCAACGGAACCATCGATTTCCCTG
AGTTCTTAACCATGATGGCCCGCAAGATGAAGGATACTGACTCTGAGGAG
GAAATCCTTGAAGCTTTCAAGGTCTTCGACAAGGACGGCAATGGATTCAT
CTCTGCCGCTGAGTTAAGACACATCATGACCAACTTAGGAGAGAAGTTGT
CGGATGAGGAAGTCGACGAAATGATCCGTGAAGCTGATATTGACGGGGAT
GGTCAGATCAACTACGAAGAGTTCGTCAAGATGATGATGTCCAAGTAAAT
CGTTTGATGACGTCATAAGAGTGTTTCCTCTGAGTGATGCACGCGGTGCG
GGTATAGCGAAGAGGATCACATAGATTATATTGAGACAAATCATTATA
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