CX300681

Overview
NameCX300681
Unique NameCX300681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4997 contig Csv1_Contig4997:16..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_SOLLC (Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 6.345e-72
Identity = 133/149 (89.26%), Postives = 143/149 (95.97%), Query Frame = 1
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MA+QLTEEQIAEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAEL DMI+EVDAD NGTIDFPEFL +MARKMKDTDSEEE+ EAFKVFDKD NGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV+MM++K
Sbjct:    1 MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMMLAK 149          
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_PLAFA (Calmodulin OS=Plasmodium falciparum PE=3 SV=4)

HSP 1 Score: 270.011 bits (689), Expect = 6.345e-72
Identity = 129/149 (86.58%), Postives = 146/149 (97.99%), Query Frame = 1
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MAD+LTEEQI+EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINE+D DGNGTIDFPEFLT+MARK+KDTD+EEE++EAF+VFD+DG+G+ISA ELRH+MTNLGEKL++EEVDEMIREADIDGDGQINYEEFVKMM++K
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIAK 149          
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_PLAF7 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 6.345e-72
Identity = 129/149 (86.58%), Postives = 146/149 (97.99%), Query Frame = 1
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MAD+LTEEQI+EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINE+D DGNGTIDFPEFLT+MARK+KDTD+EEE++EAF+VFD+DG+G+ISA ELRH+MTNLGEKL++EEVDEMIREADIDGDGQINYEEFVKMM++K
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIAK 149          
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_MALDO (Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2)

HSP 1 Score: 268.855 bits (686), Expect = 1.413e-71
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = 1
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPE L +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKL+DEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEPLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM1_SOLTU (Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 1.846e-71
Identity = 132/149 (88.59%), Postives = 142/149 (95.30%), Query Frame = 1
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MA+QLTEEQIAEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAEL DMI+E DAD NGTIDFPEFL +MARKMKDTDSEEE+ EAFKVFDKD NGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV+MM++K
Sbjct:    1 MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEADADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMMLAK 149          
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_CHLRE (Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 9.162e-71
Identity = 129/146 (88.36%), Postives = 141/146 (96.58%), Query Frame = 1
Query:   55 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMS 492
            +QLTEEQIAEFKEAF+LFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMI+EVDADGNGTIDFPEFL +MARKMK+TD E+E+ EAFKVFDKDGNGFISAAELRH+MTNLGEKLS+EEVDEMIREAD+DGDGQ+NYEEFV+MM S
Sbjct:    6 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMISEVDADGNGTIDFPEFLMLMARKMKETDHEDELREAFKVFDKDGNGFISAAELRHVMTNLGEKLSEEEVDEMIREADVDGDGQVNYEEFVRMMTS 151          
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALL3_RAT (Calmodulin-like protein 3 OS=Rattus norvegicus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.197e-70
Identity = 128/149 (85.91%), Postives = 141/149 (94.63%), Query Frame = 1
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MA+QLTEEQIAEFKEAFSLFDKDGDG ITT+ELGTVMRSLGQNPTEAEL DM+NE+D DGNGT+DFPEFLTMM+RKMKDTDSEEEI EAF+VFDKDGNGF+SAAELRH+MT LGEKLSDEEVDEMI+ AD DGDGQ+NYEEFV M++SK
Sbjct:    1 MANQLTEEQIAEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIQAADTDGDGQVNYEEFVHMLVSK 149          
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALL3_MOUSE (Calmodulin-like protein 3 OS=Mus musculus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.197e-70
Identity = 128/149 (85.91%), Postives = 141/149 (94.63%), Query Frame = 1
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDG+ITT+ELGTVMRSLGQNPTEAEL  M+NE+D DGNGT+DFPEFLTMM+RKMKDTDSEEEI EAF+VFDKDGNGF+SAAELRH+MT LGEKLSDEEVDEMI+ AD DGDGQ+NYEEFV M++SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGSITTQELGTVMRSLGQNPTEAELQGMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTKLGEKLSDEEVDEMIQAADTDGDGQVNYEEFVHMLVSK 149          
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM2_PETHY (Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 1.563e-70
Identity = 129/149 (86.58%), Postives = 143/149 (95.97%), Query Frame = 1
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MA+QLTEEQIAEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAEL DMI+EVDAD NGTIDFPEFL +MARKMKDTDSEEE+ EAFKVFDKD NG+ISAA++RH+MTNLGEKL+DEEVDEMIREAD+DGDGQ+NYEEFV+MM++K
Sbjct:    1 MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADVRHVMTNLGEKLTDEEVDEMIREADMDGDGQVNYEEFVRMMLAK 149          
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALMF_NAEGR (Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.041e-70
Identity = 132/147 (89.80%), Postives = 138/147 (93.88%), Query Frame = 1
Query:   55 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            ++LTEEQIAEFKEAFSLFDKDGDGTITT ELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDF EFLTMMA+KMKDTD+EEEI EAFKVFDKDGNGFISA ELRH+M NLGEKL+DEEVDEMIREADIDGD QINY EFVKMMM K
Sbjct:    9 NELTEEQIAEFKEAFSLFDKDGDGTITTSELGTVMRSLGQNPTEAELHDMINEVDADGNGTIDFTEFLTMMAKKMKDTDNEEEIKEAFKVFDKDGNGFISAQELRHVMCNLGEKLTDEEVDEMIREADIDGDNQINYTEFVKMMMQK 155          
The following BLAST results are available for this feature:
BLAST of CX300681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
CALM_SOLLC6.345e-7289.26Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 S... [more]
CALM_PLAFA6.345e-7286.58Calmodulin OS=Plasmodium falciparum PE=3 SV=4[more]
CALM_PLAF76.345e-7286.58Calmodulin OS=Plasmodium falciparum (isolate 3D7) ... [more]
CALM_MALDO1.413e-7188.59Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2[more]
CALM1_SOLTU1.846e-7188.59Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=... [more]
CALM_CHLRE9.162e-7188.36Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2[more]
CALL3_RAT1.197e-7085.91Calmodulin-like protein 3 OS=Rattus norvegicus GN=... [more]
CALL3_MOUSE1.197e-7085.91Calmodulin-like protein 3 OS=Mus musculus GN=Calml... [more]
CALM2_PETHY1.563e-7086.58Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2[more]
CALMF_NAEGR2.041e-7089.80Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1... [more]

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Properties
Property NameValue
Genbank descriptionC08001A12SK PhyRootSw1 Citrus sinensis cDNA clone C08001A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300681 ID=CX300681; Name=CX300681; organism=Citrus sinensis; type=EST; length=598bp
ATCACAAGATACCCTCCTCCTAACACTCCATAACTTAAATACATTAAAAT
GGCTGATCAATTAACTGAAGAGCAAATTGCTGAGTTCAAGGAAGCATTCT
CCTTATTCGACAAGGACGGAGATGGAACCATCACCACCAAGGAGTTAGGA
ACTGTCATGAGATCTCTTGGTCAGAACCCAACTGAGGCTGAGTTAGCTGA
TATGATCAACGAAGTCGATGCTGATGGCAACGGAACCATCGATTTCCCTG
AGTTCTTAACCATGATGGCCCGCAAGATGAAGGATACTGACTCTGAGGAG
GAAATCCTTGAAGCTTTCAAGGTCTTCGACAAGGACGGCAATGGATTCAT
CTCTGCCGCTGAGTTAAGACACATCATGACCAACTTAGGAGAGAAGTTGT
CGGATGAGGAAGTCGACGAAATGATCCGTGAAGCTGATATTGACGGGGAT
GGTCAGATCAACTACGAAGAGTTCGTCAAGATGATGATGTCCAAGTAAAT
CGTTTGATGACGTCATAAGAGTGTTTCCTCTGAGTGATGCACGCGGTGCG
GGTATAGCGAAGAGGATCACATAGATTATATTGAGACAAATCATTATA
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