EY702446

Overview
NameEY702446
Unique NameEY702446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=clpP PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.334e-20
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLL 518
            MP+G PKV +R PGE    WVDL+N LYR+R++F+GQ+++ E S+  +  M+YL   D +K  Y++IN PGG V P + ++ TMQ +   V T  +G    +  F+L
Sbjct:    1 MPVGVPKVPFRLPGEEDASWVDLYNRLYRQRLLFLGQDVNNEISNQIMGLMVYLSIEDGTKDQYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICIGLAASMGSFIL 107          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_PHAVU (ATP-dependent Clp protease proteolytic subunit OS=Phaseolus vulgaris GN=clpP PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.742e-20
Identity = 49/108 (45.37%), Postives = 72/108 (66.67%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLL 518
            MPIG P+V +RTPG+    WVD L N LYRER++F+GQ++D E S+  ++ M+YL    ++K +Y++IN PGG V P +A+Y TMQ ++  V T  +G    +  FLL
Sbjct:    1 MPIGVPRVPFRTPGDRDASWVDILINRLYRERLLFLGQDVDSEISNQLISLMIYLSIEKENKDLYLFINSPGGWVIPGIALYDTMQFVQPDVQTVCLGLAASMGSFLL 108          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_AMBTC (ATP-dependent Clp protease proteolytic subunit OS=Amborella trichopoda GN=clpP PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.742e-20
Identity = 46/107 (42.99%), Postives = 70/107 (65.42%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLL 518
            MP+G PKV +R+PGE    WVD++N L+RER++F+GQ ++ E S+  +  M+YL   DD++ +Y++IN PGG V P +AIY  MQ +   V T  +G    +  F+L
Sbjct:    1 MPVGVPKVPFRSPGEEDATWVDIYNRLHRERLLFLGQEVEGEISNQIVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDAMQFVPPDVHTICMGLAASMGSFVL 107          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_CHLSC (ATP-dependent Clp protease proteolytic subunit OS=Chloranthus spicatus GN=clpP PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.618e-20
Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLL 518
            MPIG PKV +R+PGE    WVD+ N L+RER++F+GQ +D E S+  +  M+YL   DD++ +Y++IN PGG V P L IY TMQ +   V T  +G    +  F+L
Sbjct:    1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGLTIYDTMQFVPPDVHTICMGLAASMGSFIL 106          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_HUPLU (ATP-dependent Clp protease proteolytic subunit OS=Huperzia lucidula GN=clpP PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.644e-20
Identity = 43/107 (40.19%), Postives = 69/107 (64.49%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLL 518
            MPIG PKV +R PG+    W+D++N L+RER++F+GQ +D+E ++  +  M+Y +  DDS+ +Y+Y+N PGG V   ++IY  MQ +   V T  +G    +  F+L
Sbjct:    1 MPIGVPKVPFRLPGDEDAVWIDVYNRLFRERLLFLGQQVDDELANQLICIMIYPNGEDDSRDMYLYVNSPGGAVFAGISIYDAMQFVVPDVQTICIGLAASMGSFVL 107          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_PHYPA (ATP-dependent Clp protease proteolytic subunit OS=Physcomitrella patens GN=clpP PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.129e-19
Identity = 45/108 (41.67%), Postives = 71/108 (65.74%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWN-ALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLL 518
            MPIG PKV +R PGE    W+D++N  LYRER++F+GQ++D+E ++  +  M+YL+  D++K +Y+YIN PGG V   +++Y  MQ +   V T  +G    +  F+L
Sbjct:    1 MPIGVPKVPFRLPGEEDAVWIDVYNNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDENKDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFIL 108          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_ACOGR (ATP-dependent Clp protease proteolytic subunit OS=Acorus gramineus GN=clpP PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.129e-19
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLL 518
            MPIG PKVL+ +PGE    WVD++N L+RER++F+GQ +D E S+  +  M+YL   D ++  +++IN PGG V P + +Y TMQ +   V T  +G    +  F+L
Sbjct:    1 MPIGVPKVLFGSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKTRDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFIL 107          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_ACOCL (ATP-dependent Clp protease proteolytic subunit OS=Acorus calamus GN=clpP PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.129e-19
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLL 518
            MPIG PKV +R+PGE    WVD++N L+RER++F+GQ +D E S+  +  M+YL   D ++  +++IN PGG V P + +Y TMQ +   V T  +G    +  F+L
Sbjct:    1 MPIGVPKVPFRSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKTRDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFIL 107          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_PINCO (ATP-dependent Clp protease proteolytic subunit OS=Pinus contorta GN=clpP PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.474e-19
Identity = 43/107 (40.19%), Postives = 68/107 (63.55%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLL 518
            MP+G PKV +R PG+    WVDL+N LYRER++F+ Q+I+ E ++  +  M+YL + D +K ++ +IN PGG V P + +Y  MQ++   V T  +G    +  F+L
Sbjct:    1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDANKEIFSFINCPGGSVIPGVGLYRMMQAIVPDVNTICMGVAASMGSFIL 107          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_NEPOL (ATP-dependent Clp protease proteolytic subunit OS=Nephroselmis olivacea GN=clpP PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLL 518
            MP+G PKV YR PGE + QWVDL+N LYR+R++F+GQ + +E S+     M+YL + D S  ++MYIN PGG VT  L ++     +   V T  VG    +A  +L
Sbjct:    1 MPVGVPKVPYRLPGESAPQWVDLYNRLYRQRLLFMGQELGDELSNQLCGIMIYLFAEDPSIPLFMYINSPGGSVTSGLGVFDIATVMMQDVTTICVGIAASMASLVL 107          
The following BLAST results are available for this feature:
BLAST of EY702446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_CUCSA1.334e-2042.06ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PHAVU1.742e-2045.37ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AMBTC1.742e-2042.99ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CHLSC6.618e-2045.79ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HUPLU8.644e-2040.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PHYPA1.129e-1941.67ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ACOGR1.129e-1942.06ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ACOCL1.129e-1942.06ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PINCO1.474e-1940.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NEPOL1.926e-1943.93ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-A10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702446 ID=EY702446; Name=EY702446; organism=Citrus sinensis; type=EST; length=891bp
CCGTTTCTCTTAACGCAAACTTATATCAACCTTCTCTGAGCTGTAACCTC
AAGCTTTATTCTGGATTAAAGATTCAATCACCAAGTGTTTTTGGAACTGG
GAAACCTAATTTGAGTGGTGGAGGCTATGGCAGAGTTCATAAGAGCCTCT
ACTCCGGGATTCGTAATGATAAACCAATAAGGGGACGAATTGCAATGATG
CCAATTGGGACACCAAAAGTGCTTTATAGGACGCCTGGTGAGGGATCTTG
GCAATGGGTTGATCTATGGAATGCCCTATATCGAGAACGTGTTATTTTCA
TTGGGCAAAATATAGATGAAGAATTTAGCAGCGGGGGATTGGCAACGATG
TTGTATCTAGACAGTGTTGATGATTCCAAAAGGGTTTATATGTACATCAA
CGGTCCTGGGGGGGATGTTACTCCCACCTTGGCAATTTACCACACTATGC
AGAGCTTGAAGAGCCCTGTTGGCACTCACTGGGTGGGCTTTGGCCATCAT
TTAGCAGGGTTTCTCCTACCACGGCGACAAAAAGGGTAATCGGGTCTGCA
ATGCCTCTTTCGAGAATGGCTTTACACTCCTCCAGCTGGGGGCACCTCCC
GGGNCACGCTTGATGACCTTCCCTAAGGAAGACCAAAGGACCCTCTTAAA
CCCCGCAAAATACCATTTTCCAGGGAAGTTCGCCAAGGAAAACCCGGGCC
CGCCCCTTTAAGAAAAATCCCGACGGGATTTCGCGGAGGGATCAACCCGC
TTTGCCTCCCCCAGGAAGGCTCTCGGGATATGGGGGGCGCCTAAGATCCT
CCAAACCCAGGCCCCCCCTCCTACCTTAGGGAAAAAAACGCCACCCCCAC
AAACTCCCTGAGAACACGCCCCCGCGTCATGGCGGAATCTC
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