EY702444

Overview
NameEY702444
Unique NameEY702444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.596e-18
Identity = 67/224 (29.91%), Postives = 101/224 (45.09%), Query Frame = 2
Query:  206 TVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLD-------QLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKE-------------NLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD----------DFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMI-TSNSKEEDVFVAEQAKRALELPLH 784
            ++ RR+ N+  ++WD D + SLNS Y    Y    ++L  ++K  +    E  D       +L+++D L+ LG+  HFE E              Y W  E             +L AT+L FR LR H Y VS  V   FKD+   F C+            + +LSL  AS  S  GE +MEE   FT ++L +++    +  + D  +  + K ALE P H
Sbjct:    8 SIPRRTGNHHGNVWDDDLIHSLNSPYGAPAYYELLQKLIQEIKHLLLTEMEMDDGDHDLIKRLQIVDTLECLGIDRHFEHEIQTAALDYV-----YRWWNEKGIGEGSRDSFSKDLNATALGFRALRLHRYNVSSGVLKNFKDENGKFFCNFTGEEGRGDKQVRSMLSLLRASEISFPGEKVMEEAKAFTREYLNQVLAGHGDVTDVDQSLLREVKYALEFPWH 226          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: TPSD1_ABIGR (Alpha-bisabolene synthase OS=Abies grandis GN=ag1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.357e-13
Identity = 51/156 (32.69%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  362 LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMM---ITSNSKEEDVFVAEQAKRALELPLH 784
            L++L ++DN+ RLG+  HFE E             +    W + N    L  T+L FRLLR H Y VS  +F  FKD    FIC       D   +L+L+ AS  +  GE+I++E   F +K+L+E +    TS++      ++++ K AL+   H
Sbjct:  299 LERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSAWNNKQNLSQEIKYALKTSWH 454          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: BARS_ARATH (Alpha-barbatene synthase OS=Arabidopsis thaliana GN=BS PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.609e-13
Identity = 54/190 (28.42%), Postives = 87/190 (45.79%), Query Frame = 2
Query:  239 SIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAI-----KDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLH 784
            S W   FL+   ++   +  +R  E LK KV+  I      D       +  I  L  LGL+YHFE E            +D    +  L+  S  FR+ R +GY +S +VF  FK D   F   + +D KG+LS +EA ++    + I++E   FT  HL+   + +  +     +++  + AL +P H
Sbjct:   21 SQWGDQFLKFSIADSDFDVLEREIEVLKPKVRENIFVSSSTDKDAMKKTILSIHFLDSLGLSYHFEKEIEESLKHAFEKIEDLIADENKLHTISTIFRVFRTYGYYMSSDVFKIFKGDDGKFKESLIEDVKGMLSFYEAVHFGTTTDHILDEALSFTLNHLES--LATGRRASPPHISKLIQNALHIPQH 208          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: GBIS2_ARATH ((Z)-gamma-bisabolene synthase 2 OS=Arabidopsis thaliana GN=TPS13 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.651e-12
Identity = 44/140 (31.43%), Postives = 68/140 (48.57%), Query Frame = 2
Query:  377 LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHW 787
            LI +L  LGLA+HFE E             D    + +L   S+ FR+ R +G+ +   VF  F  D   F   + +D KGILSL+EA++     + I++E  +FTS HLK +++    +     +    +  L LP  W
Sbjct:   69 LIQSLLSLGLAFHFENEIKDILEDAFRRIDDITGDENDLSTISIMFRVFRTYGHNLPSSVFKRFTGDDGKFERSLTEDAKGILSLYEAAHLGTTTDYILDEALEFTSSHLKSLLVGGMCRPH---ILRLIRNTLYLPQRW 205          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: GBIS1_ARATH ((Z)-gamma-bisabolene synthase 1 OS=Arabidopsis thaliana GN=TPS12 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.812e-11
Identity = 44/140 (31.43%), Postives = 67/140 (47.86%), Query Frame = 2
Query:  377 LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHW 787
            LI  L  LGLA+HFE E             D    +++L   S+ FR+ R +G+ +   VF  F  D   F   + +D KGILSL+EA++     + I++E  +FTS HLK ++     +     +    +  L LP  W
Sbjct:   69 LIQLLLSLGLAFHFENEIKNILEHAFRKIDDITGDEKDLSTISIMFRVFRTYGHNLPSSVFKRFTGDDGKFQQSLTEDAKGILSLYEAAHLGTTTDYILDEALKFTSSHLKSLLAGGTCRPH---ILRLIRNTLYLPQRW 205          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: LINS_ARATH (Linalool synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS14 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11
Identity = 51/183 (27.87%), Postives = 85/183 (46.45%), Query Frame = 2
Query:  251 HDFLQSLNSNYTDETYKRRAEELK-GKVKTAIK-DVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLH 784
            H  + + +  + ++T    + EL   K+K  +  +V  P + LE+ID +Q LG   HF                 +N    +L+  +L FRLLRQ G+ V + +F    D K GF   + +D KG+  L EAS   +EGE  ++   +FT   L E+     S ++     ++  ++L  P H
Sbjct:   52 HASVSNPSKQFHNKTSLEYSHELNIKKIKNILSANVDVPSENLEMIDVIQSLGTDLHFRQGIEQTLHMIYKEGLQFNG---DLHEIALRFRLLRQEGHYVQESIFKNILDKKGGFKDVVKNDVKGLTELFEASELRVEGEETLDGAREFTYSRLNELCSGRESHQK-----QEIMKSLAQPRH 226          
The following BLAST results are available for this feature:
BLAST of EY702444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TPSD4_ABIGR7.596e-1829.91Delta-selinene synthase OS=Abies grandis GN=ag4 PE... [more]
TPSD1_ABIGR7.357e-1332.69Alpha-bisabolene synthase OS=Abies grandis GN=ag1 ... [more]
BARS_ARATH9.609e-1328.42Alpha-barbatene synthase OS=Arabidopsis thaliana G... [more]
GBIS2_ARATH3.651e-1231.43(Z)-gamma-bisabolene synthase 2 OS=Arabidopsis tha... [more]
GBIS1_ARATH1.812e-1131.43(Z)-gamma-bisabolene synthase 1 OS=Arabidopsis tha... [more]
LINS_ARATH6.886e-1127.87Linalool synthase, chloroplastic OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702444 ID=EY702444; Name=EY702444; organism=Citrus sinensis; type=EST; length=857bp
CCACGCGTCCGCTTCCCAGTATACCTGTAAGCTAGCTTACACTGCATCTG
TATATCCAATGGCTTCTTGCATTAATCCCTCAACCTTGGCTACCTCTGTA
AATGGTTTCAAATGTCTTCCTCTTGCAACAAATAGAGCAGCCATCAGAAT
CATGGCAAAAAATAAGCCAGTCCAATGCCTTGTCAGCACCAAATATGATA
ATTTGACAGTTGATAGGAGATCAGCAAACTACCAACCTTCAATTTGGGAC
CATGATTTTTTGCAGTCACTGAATAGCAACTATACGGATGAAACATACAA
AAGACGAGCAGAAGAGCTGAAGGGAAAAGTGAAGACAGCGATTAAGGATG
TAACCGAGCCTCTGGATCAGTTGGAGCTGATTGATAATTTGCAAAGACTT
GGATTGGCTTATCATTTTGAGCCTGAGATTCGGAACATATTGCGTAATAT
CCACAACCATAATAAAGATTATAATTGGAGAAAAGAAAATCTGTATGCAA
CCTCCCTTGAATTCAGACTACTTAGACAACATGGCTATCCTGTTTCTCAA
GAGGTTTTCAGTGGTTTTAAAGACGACAAGGTAGGCTTCATTTGTGATGA
TTTCAAGGGAATACTGAGCTTGCATGAAGCCTCGTATTACAGCTTAGAAG
GAGAAAGCATCATGGAGGAGGGCTGGCAATTCACCAGTAAGCATCTTAAA
GAAATGATGATCACCAGCAACAGCAAGGAAGAGGATGTATTTGTAGCAGA
ACAAGCGAAGCGGGCGCTGGAGCTCCCTCTGCATTGGAAAGGCCTATGGT
AGAAGCAAGGTGGGTCATACACGTTTATGAGAAAAGAGAGACCAGAACCA
CCTTTAC
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