EY702440

Overview
NameEY702440
Unique NameEY702440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDH_SHIB3 (Malate dehydrogenase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=mdh PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1 
Query:  292 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQK 618
            KVAVLGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVK L +++A+ C K
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK 111
[Close]
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDH_KLEP3 (Malate dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=mdh PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 63/109 (57.80%), Postives = 78/109 (71.56%), Query Frame = 1 
Query:  292 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCC 612
            KVAVLGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T+  ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVK L ++IA+ C
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTDVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTC 109
[Close]
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDH_ENT38 (Malate dehydrogenase OS=Enterobacter sp. (strain 638) GN=mdh PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = 1 
Query:  292 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQK 618
            KVAVLGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVK L ++IA  C K
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGENA-RPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAETCPK 111
[Close]
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDH_ECOUT (Malate dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=mdh PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1 
Query:  292 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQK 618
            KVAVLGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVK L +++A+ C K
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK 111
[Close]
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDH_ECOSM (Malate dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1 
Query:  292 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQK 618
            KVAVLGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVK L +++A+ C K
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK 111
[Close]
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDH_ECOLI (Malate dehydrogenase OS=Escherichia coli (strain K12) GN=mdh PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1 
Query:  292 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQK 618
            KVAVLGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVK L +++A+ C K
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK 111
[Close]
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDH_ECOL6 (Malate dehydrogenase OS=Escherichia coli O6 GN=mdh PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1 
Query:  292 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQK 618
            KVAVLGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVK L +++A+ C K
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK 111
[Close]
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDH_ECOL5 (Malate dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1 
Query:  292 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQK 618
            KVAVLGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVK L +++A+ C K
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK 111
[Close]
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDH_ECOK1 (Malate dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=mdh PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1 
Query:  292 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQK 618
            KVAVLGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVK L +++A+ C K
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK 111
[Close]
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDH_ECOHS (Malate dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=mdh PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1 
Query:  292 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQK 618
            KVAVLGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVK L +++A+ C K
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK 111
The following BLAST results are available for this feature:
BLAST of EY702440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
MDH_SHIB31.768e-2556.76Malate dehydrogenase OS=Shigella boydii serotype 1... [more]
MDH_KLEP31.768e-2557.80Malate dehydrogenase OS=Klebsiella pneumoniae (str... [more]
MDH_ENT381.768e-2557.66Malate dehydrogenase OS=Enterobacter sp. (strain 6... [more]
MDH_ECOUT1.768e-2556.76Malate dehydrogenase OS=Escherichia coli (strain U... [more]
MDH_ECOSM1.768e-2556.76Malate dehydrogenase OS=Escherichia coli (strain S... [more]
MDH_ECOLI1.768e-2556.76Malate dehydrogenase OS=Escherichia coli (strain K... [more]
MDH_ECOL61.768e-2556.76Malate dehydrogenase OS=Escherichia coli O6 GN=mdh... [more]
MDH_ECOL51.768e-2556.76Malate dehydrogenase OS=Escherichia coli O6:K15:H3... [more]
MDH_ECOK11.768e-2556.76Malate dehydrogenase OS=Escherichia coli O1:K1 / A... [more]
MDH_ECOHS1.768e-2556.76Malate dehydrogenase OS=Escherichia coli O9:H4 (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-A03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702440 ID=EY702440; Name=EY702440; organism=Citrus sinensis; type=EST; length=642bp
CGGAGCTCTCTCCCTCACGTCAGCAATCTCAGCCCTTTGTTTTCATAATT
ATAAATTAAAAAACAGAAGTAGATGTAGCACCACCGCATCAATTTCATTT
TCTGTGAATTGTTTGTTTTATCACGACTAAGTCTCCAGAAACTCAGAACC
ATGCAGCAGCCAACTTCAGGAGCAAATCAACGCATTGCGAGAATCGCTGC
TCATCTCCATCCACCAACTCTCCAGATAGAGGGAGAGAGTTCGGGTTTGG
GGCGGATGGATTGCAGGGCAAAAGGCGGGTCGCCCGGATTCAAGGTGGCT
GTATTGGGAGCTGCTGGAGGGATTGGACAGCCTCTGGCTATGTTGATGAA
GATCAATCCCTTGGTTTCAGTTCTTCATCTTTATGATGTTGTCAATACTC
CTGGGGTTACTGCCGATATCAGTCACATGGATACAAATGCTGTGGTACGA
GGATTTTTGGGGCAACAGCAATTGGAGGATGCCCTCACGGGCATGGACAT
TGTAATCATTCCCGCTGGTGTTCCTAGGAAACCTGGGATGACTAGGGATG
ATCTGTTCAATATCAATGCCGGGATTGTTAAGACCCTTTGTGAAAGGATA
GCTAGGTGCTGTCAAAAGCTATTGGGACTTGNATAGTAATCC
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