EY680036

Overview
NameEY680036
Unique NameEY680036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH601_BURCM (60 kDa chaperonin 1 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 3
Query:    3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 248
            SVV   V +   + YGYNAATG Y D++ AG++DPTKV R  L++A+SVA   L +D  V E+ + +  MP G P    G G
Sbjct:  463 SVVVAAVAAGQGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543          
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_RALME (60 kDa chaperonin OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=groL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 3
Query:    3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 221
            SVV  KV+    + YGYNAA+G Y DL+  G++DPTKV R  L++A+SVA   L +DC V E   +E  PAMP G
Sbjct:  463 SVVVAKVIEGKGN-YGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAESPKEESAPAMPGG 536          
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_RALEH (60 kDa chaperonin OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=groL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 3
Query:    3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 221
            SVV  KV+    + YGYNAA+G Y DL+  G++DPTKV R  L++A+SVA   L +DC V E   +E  PAMP G
Sbjct:  463 SVVVAKVIEGKGN-YGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAESPKEESAPAMPGG 536          
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_FRAP2 (60 kDa chaperonin OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=groL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 3
Query:    3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 221
            SVV  +V + + + YGYNAA   Y D++  GI+DPTKV R  L+HA+S+A   + ++ +V EIKE  PAMP G
Sbjct:  463 SVVVNEVKAKEGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMVAEIKEDAPAMPMG 534          
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_BURVI (60 kDa chaperonin OS=Burkholderia vietnamiensis GN=groL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 3
Query:   45 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 248
            YGYNAATG Y D++ AG++DPTKV R  L++A+SVA   L +D  V E+ + +  MP G P    G G
Sbjct:  476 YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543          
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_BURTH (60 kDa chaperonin OS=Burkholderia thailandensis GN=groL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 3
Query:   45 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 248
            YGYNAATG Y D++ AG++DPTKV R  L++A+SVA   L +D  V E+ + +  MP G P    G G
Sbjct:  476 YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543          
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_BURMS (60 kDa chaperonin OS=Burkholderia mallei (strain SAVP1) GN=groL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 3
Query:   45 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 248
            YGYNAATG Y D++ AG++DPTKV R  L++A+SVA   L +D  V E+ + +  MP G P    G G
Sbjct:  476 YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543          
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_BURMA (60 kDa chaperonin OS=Burkholderia mallei GN=groL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 3
Query:   45 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 248
            YGYNAATG Y D++ AG++DPTKV R  L++A+SVA   L +D  V E+ + +  MP G P    G G
Sbjct:  476 YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543          
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_BURM9 (60 kDa chaperonin OS=Burkholderia mallei (strain NCTC 10229) GN=groL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 3
Query:   45 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 248
            YGYNAATG Y D++ AG++DPTKV R  L++A+SVA   L +D  V E+ + +  MP G P    G G
Sbjct:  476 YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543          
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_BURM7 (60 kDa chaperonin OS=Burkholderia mallei (strain NCTC 10247) GN=groL PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 3
Query:   45 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 248
            YGYNAATG Y D++ AG++DPTKV R  L++A+SVA   L +D  V E+ + +  MP G P    G G
Sbjct:  476 YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543          
The following BLAST results are available for this feature:
BLAST of EY680036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
CH601_BURCM2.784e-1245.1260 kDa chaperonin 1 OS=Burkholderia ambifaria (str... [more]
CH60_RALME3.635e-1250.6760 kDa chaperonin OS=Ralstonia metallidurans (stra... [more]
CH60_RALEH3.635e-1250.6760 kDa chaperonin OS=Ralstonia eutropha (strain AT... [more]
CH60_FRAP23.635e-1247.9560 kDa chaperonin OS=Francisella philomiragia subs... [more]
CH60_BURVI3.635e-1248.5360 kDa chaperonin OS=Burkholderia vietnamiensis GN... [more]
CH60_BURTH3.635e-1248.5360 kDa chaperonin OS=Burkholderia thailandensis GN... [more]
CH60_BURMS3.635e-1248.5360 kDa chaperonin OS=Burkholderia mallei (strain S... [more]
CH60_BURMA3.635e-1248.5360 kDa chaperonin OS=Burkholderia mallei GN=groL P... [more]
CH60_BURM93.635e-1248.5360 kDa chaperonin OS=Burkholderia mallei (strain N... [more]
CH60_BURM73.635e-1248.5360 kDa chaperonin OS=Burkholderia mallei (strain N... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-G03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680036 ID=EY680036; Name=EY680036; organism=Citrus sinensis; type=EST; length=629bp
GAAGTGTGGTCAGCGAGAAGGTGCTTTCAAGTGACAATCATAAATATGGA
TACAATGCTGCAACTGGAAACTACGAAGATCTAATGGCTGCAGGAATTAT
TGATCCTACCAAGGTGGTTAGATGTTGCTTGGAGCATGCTTCCTCGGTGG
CAAAAACCTTCTTGATGTCCGACTGTGTGGTGGTTGAGATCAAGGAGCCT
GAACCCGCTATGCCTGCGGGTAACCCTATGGACAACTCAGGATATGGATA
CTAAGCTAATTAACAAGGTCACGGGAGGCAAGCAAATAAGGTTCTGACTT
CGTTATAGCAACTATCTTTCAGTTTGACAGCGTTGGGTTCTCTTCTTCTT
GTAAATTCAATTACTCGACTTAGTAGAGTTTATGGATTCTGGTGAGGATA
GCTTGCCAGAGTACGGCTCGTATTAATTTGCAATTAGATGTACAATTGCA
ATGATTTTGAACTTTTTGAGTGAAAGAAATTTTATTTTGCTCATCTCCTT
CACAGTCTGATACTAATTCTGCGGGTACTCACATTTGTTACTGTTCACTG
TTCCTCGAGCTTAAATGTTATAACTCTTGGTCTTGAATGGTTACATGATT
TTACACCCAAAAAAAAAAAAAAAAAGGGC
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