EY702434

Overview
NameEY702434
Unique NameEY702434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.071e-83
Identity = 150/159 (94.34%), Postives = 158/159 (99.37%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            +YIALD+EQE+ET+KTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYG IVLSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  219 SYIALDFEQEMETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGKIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.071e-83
Identity = 149/159 (93.71%), Postives = 157/159 (98.74%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AYIALDYEQE+ETA TSS+VEKSYELPDGQVITIG ERFRCPEVLFQPS++GME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  219 AYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 6.622e-83
Identity = 150/159 (94.34%), Postives = 157/159 (98.74%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AYIALDYEQELETAK+SS+VEKSYELPDGQVITIGAERFRCPEVLFQPS+IGME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  219 AYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 6.622e-83
Identity = 150/159 (94.34%), Postives = 157/159 (98.74%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AYIALDYEQELETAK+SS+VEKSYELPDGQVITIGAERFRCPEVLFQPS+IGME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  219 AYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT1_PEA (Actin-1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.649e-83
Identity = 148/159 (93.08%), Postives = 158/159 (99.37%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AY+ALDYEQELETAK+SS++EK+YELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K+EYDE GPSIVHRKCF
Sbjct:  218 AYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT2_PEA (Actin-2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.927e-82
Identity = 147/159 (92.45%), Postives = 158/159 (99.37%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AY+ALDYEQELETAK+SS++EK+YELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPER+YSVWIGGSILASLSTFQQMWI+K+EYDE GPSIVHRKCF
Sbjct:  218 AYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERRYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT6_SOLTU (Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 7.322e-82
Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AY+ALD+EQELET KT SAVEK+YELPDGQVITIGAERFRCPEVL+QPS+IGME+AGIHETTYNSIMKCDVDIRKDLYGN VLSGGSTMFPGIADRMSKEI ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  219 AYLALDFEQELETTKTGSAVEKNYELPDGQVITIGAERFRCPEVLYQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNHVLSGGSTMFPGIADRMSKEIQALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSJ (Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.322e-82
Identity = 146/159 (91.82%), Postives = 158/159 (99.37%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AY+ALDYEQELETAK+SS+VEKSYELPDGQVITIGAERFRCPEV+FQPS+IGME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+++EY+ESGP+IVHRKCF
Sbjct:  219 AYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSI (Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.322e-82
Identity = 146/159 (91.82%), Postives = 158/159 (99.37%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AY+ALDYEQELETAK+SS+VEKSYELPDGQVITIGAERFRCPEV+FQPS+IGME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+++EY+ESGP+IVHRKCF
Sbjct:  219 AYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT12_ARATH (Actin-12 OS=Arabidopsis thaliana GN=ACT12 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.631e-81
Identity = 148/159 (93.08%), Postives = 156/159 (98.11%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            +YIALDYEQELET+KTSS+VEKS+ELPDGQVITIGAERFRCPEVLFQPSMIGME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMF GI DRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  219 SYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
The following BLAST results are available for this feature:
BLAST of EY702434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ACT1_TOBAC5.071e-8394.34Actin OS=Nicotiana tabacum PE=3 SV=1[more]
ACT11_ARATH5.071e-8393.71Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=... [more]
ACT3_ORYSJ6.622e-8394.34Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE... [more]
ACT3_ORYSI6.622e-8394.34Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2... [more]
ACT1_PEA8.649e-8393.08Actin-1 OS=Pisum sativum PE=2 SV=1[more]
ACT2_PEA1.927e-8292.45Actin-2 OS=Pisum sativum PE=2 SV=1[more]
ACT6_SOLTU7.322e-8293.08Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2[more]
ACT2_ORYSJ7.322e-8291.82Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE... [more]
ACT2_ORYSI7.322e-8291.82Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3... [more]
ACT12_ARATH1.631e-8193.08Actin-12 OS=Arabidopsis thaliana GN=ACT12 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-H08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702434 ID=EY702434; Name=EY702434; organism=Citrus sinensis; type=EST; length=721bp
CCACGCGTCCGCATACATTGCCCTTGATTATGAACAAGAATTAGAAACCG
CCAAGACCAGCTCTGCTGTTGAAAAGAGCTATGAGTTACCAGATGGTCAG
GTGATCACCATTGGTGCTGAGCGTTTTAGATGCCCAGAAGTCCTTTTCCA
ACCATCAATGATCGGTATGGAGTCTGCTGGTATTCATGAAACAACTTACA
ACTCCATAATGAAATGTGATGTTGATATTAGGAAGGATCTGTATGGGAAC
ATTGTACTTAGTGGCGGTTCCACCATGTTCCCTGGTATTGCTGATAGAAT
GAGCAAAGAAATCAGTGCATTAGCACCAAGCAGCATGAAGATTAAGGTGG
TTGCTCCTCCCGAGAGGAAATATAGTGTCTGGATAGGAGGATCCATTTTG
GCATCCCTCAGCACTTTCCAGCAAATGTGGATTGCCAAATCTGAGTATGA
TGAGTCTGGCCCTTCAATAGTGCACAGGAAATGCTTCTGATCAGGAGCAA
ATATGGACTGGAGCATGGTGCTATTTTAAAACCAAAATGCTGCTTGCATT
TTCTATTTTAAAACCAAAATGCTGCTTGCATTTTCATTCATTTTATTGCC
TTTCTTGGCATTCTTCATTTCAACGTGTGGACAACAACCTGGAAAGAACA
TAATCGTTGCTGTACTATTTCCAAATTTTTATCCCTTTTTCTCAGTAGTG
ATAAATTGTTACCCCCTCAAT
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