EY702410

Overview
NameEY702410
Unique NameEY702410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702410 vs. ExPASy Swiss-Prot
Match: IDI_SALSV (Isopentenyl-diphosphate Delta-isomerase OS=Salmonella schwarzengrund (strain CVM19633) GN=idi PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  196 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL-GRILYKAPSDGKWGEHELDYLFFIVRDVSVNPNPDEVAEYKYVNREQV-KELLRKADAGEEGLKLSPWV 750
            M E+  +L+DE D+  G   KY  H +        LH AFS +LFN   +LL+ +RS +K  +P VWTN+ C HP  ++ E  EE       A  R+   ELG     V + + TP+     Y+A       E+E+  +F       +  N +EV +Y++   + V K LL    A       SPW+
Sbjct:    1 MTEEHVVLLDEQDKPSGTLEKYAAHTLN-----TPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHP--QQGETTEE-------AIIRRCRFELG-----VEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWA------FSPWM 162
[Close]
BLAST of EY702410 vs. ExPASy Swiss-Prot
Match: IDI_SALPK (Isopentenyl-diphosphate Delta-isomerase OS=Salmonella paratyphi A (strain AKU_12601) GN=idi PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  196 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL-GRILYKAPSDGKWGEHELDYLFFIVRDVSVNPNPDEVAEYKYVNREQV-KELLRKADAGEEGLKLSPWV 750
            M E+  +L+DE D+  G   KY  H +        LH AFS +LFN   +LL+ +RS +K  +P VWTN+ C HP  ++ E  EE       A  R+   ELG     V + + TP+     Y+A       E+E+  +F       +  N +EV +Y++   + V K LL    A       SPW+
Sbjct:    1 MTEEHVVLLDEQDKPSGTLEKYAAHTLN-----TPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHP--QQGETTEE-------AIIRRCRFELG-----VEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWA------FSPWM 162
[Close]
BLAST of EY702410 vs. ExPASy Swiss-Prot
Match: IDI_SALPC (Isopentenyl-diphosphate Delta-isomerase OS=Salmonella paratyphi C (strain RKS4594) GN=idi PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  196 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL-GRILYKAPSDGKWGEHELDYLFFIVRDVSVNPNPDEVAEYKYVNREQV-KELLRKADAGEEGLKLSPWV 750
            M E+  +L+DE D+  G   KY  H +        LH AFS +LFN   +LL+ +RS +K  +P VWTN+ C HP  ++ E  EE       A  R+   ELG     V + + TP+     Y+A       E+E+  +F       +  N +EV +Y++   + V K LL    A       SPW+
Sbjct:    1 MTEEHVVLLDEQDKPSGTLEKYAAHTLN-----TPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHP--QQGETTEE-------AIIRRCRFELG-----VEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWA------FSPWM 162
[Close]
BLAST of EY702410 vs. ExPASy Swiss-Prot
Match: IDI_SALPB (Isopentenyl-diphosphate Delta-isomerase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=idi PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  196 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL-GRILYKAPSDGKWGEHELDYLFFIVRDVSVNPNPDEVAEYKYVNREQV-KELLRKADAGEEGLKLSPWV 750
            M E+  +L+DE D+  G   KY  H +        LH AFS +LFN   +LL+ +RS +K  +P VWTN+ C HP  ++ E  EE       A  R+   ELG     V + + TP+     Y+A       E+E+  +F       +  N +EV +Y++   + V K LL    A       SPW+
Sbjct:    1 MTEEHVVLLDEQDKPSGTLEKYAAHTLN-----TPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHP--QQDETTEE-------AIIRRCRFELG-----VEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWA------FSPWM 162
[Close]
BLAST of EY702410 vs. ExPASy Swiss-Prot
Match: IDI_SALPA (Isopentenyl-diphosphate Delta-isomerase OS=Salmonella paratyphi A GN=idi PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  196 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL-GRILYKAPSDGKWGEHELDYLFFIVRDVSVNPNPDEVAEYKYVNREQV-KELLRKADAGEEGLKLSPWV 750
            M E+  +L+DE D+  G   KY  H +        LH AFS +LFN   +LL+ +RS +K  +P VWTN+ C HP  ++ E  EE       A  R+   ELG     V + + TP+     Y+A       E+E+  +F       +  N +EV +Y++   + V K LL    A       SPW+
Sbjct:    1 MTEEHVVLLDEQDKPSGTLEKYAAHTLN-----TPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHP--QQGETTEE-------AIIRRCRFELG-----VEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWA------FSPWM 162
[Close]
BLAST of EY702410 vs. ExPASy Swiss-Prot
Match: IDI_SALNS (Isopentenyl-diphosphate Delta-isomerase OS=Salmonella newport (strain SL254) GN=idi PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  196 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL-GRILYKAPSDGKWGEHELDYLFFIVRDVSVNPNPDEVAEYKYVNREQV-KELLRKADAGEEGLKLSPWV 750
            M E+  +L+DE D+  G   KY  H +        LH AFS +LFN   +LL+ +RS +K  +P VWTN+ C HP  ++ E  EE       A  R+   ELG     V + + TP+     Y+A       E+E+  +F       +  N +EV +Y++   + V K LL    A       SPW+
Sbjct:    1 MTEEHVVLLDEQDKPSGTLEKYAAHTLN-----TPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHP--QQDETTEE-------AIIRRCRFELG-----VEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWA------FSPWM 162
[Close]
BLAST of EY702410 vs. ExPASy Swiss-Prot
Match: IDI_SALHS (Isopentenyl-diphosphate Delta-isomerase OS=Salmonella heidelberg (strain SL476) GN=idi PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  196 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL-GRILYKAPSDGKWGEHELDYLFFIVRDVSVNPNPDEVAEYKYVNREQV-KELLRKADAGEEGLKLSPWV 750
            M E+  +L+DE D+  G   KY  H +        LH AFS +LFN   +LL+ +RS +K  +P VWTN+ C HP  ++ E  EE       A  R+   ELG     V + + TP+     Y+A       E+E+  +F       +  N +EV +Y++   + V K LL    A       SPW+
Sbjct:    1 MTEEHVVLLDEQDKPSGTLEKYAAHTLN-----TPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHP--QQGETTEE-------AIIRRCRFELG-----VEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWA------FSPWM 162
[Close]
BLAST of EY702410 vs. ExPASy Swiss-Prot
Match: IDI_SALEP (Isopentenyl-diphosphate Delta-isomerase OS=Salmonella enteritidis PT4 (strain P125109) GN=idi PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  196 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL-GRILYKAPSDGKWGEHELDYLFFIVRDVSVNPNPDEVAEYKYVNREQV-KELLRKADAGEEGLKLSPWV 750
            M E+  +L+DE D+  G   KY  H +        LH AFS +LFN   +LL+ +RS +K  +P VWTN+ C HP  ++ E  EE       A  R+   ELG     V + + TP+     Y+A       E+E+  +F       +  N +EV +Y++   + V K LL    A       SPW+
Sbjct:    1 MTEEHVVLLDEQDKPSGTLEKYAAHTLN-----TPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHP--QQGETTEE-------AIIRRCRFELG-----VEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWA------FSPWM 162
[Close]
BLAST of EY702410 vs. ExPASy Swiss-Prot
Match: IDI_SALDC (Isopentenyl-diphosphate Delta-isomerase OS=Salmonella dublin (strain CT_02021853) GN=idi PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  196 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL-GRILYKAPSDGKWGEHELDYLFFIVRDVSVNPNPDEVAEYKYVNREQV-KELLRKADAGEEGLKLSPWV 750
            M E+  +L+DE D+  G   KY  H +        LH AFS +LFN   +LL+ +RS +K  +P VWTN+ C HP  ++ E  EE       A  R+   ELG     V + + TP+     Y+A       E+E+  +F       +  N +EV +Y++   + V K LL    A       SPW+
Sbjct:    1 MTEEHVVLLDEQDKPSGTLEKYAAHTLN-----TPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHP--QQGETTEE-------AIIRRCRFELG-----VEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWA------FSPWM 162
[Close]
BLAST of EY702410 vs. ExPASy Swiss-Prot
Match: IDI_SALCH (Isopentenyl-diphosphate Delta-isomerase OS=Salmonella choleraesuis GN=idi PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 59/187 (31.55%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  196 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL-GRILYKAPSDGKWGEHELDYLFFIVRDVSVNPNPDEVAEYKYVNREQV-KELLRKADAGEEGLKLSPWV 750
            M E+  +L+DE D+  G   KY  H +        LH AFS +LFN   +LL+ +RS +K  +P VWTN+ C HP  ++ E  EE       A  R+   ELG     V + + TP+     Y+A       E+E+  +F       +  N +EV +Y++   + V K LL    A       SPW+
Sbjct:    1 MTEEHVVLLDEQDKPSGTLEKYAAHTLN-----TPLHLAFSCWLFNEDGQLLVTRRSLSKKAWPGVWTNSVCGHP--QQGETTEE-------AIIRRCRFELG-----VEITDLTPVYPHFSYRATDPNGIVENEVCPVFAARATSVLQVNSEEVMDYQWSEFKSVWKSLLATPWA------FSPWM 162
The following BLAST results are available for this feature:
BLAST of EY702410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
IDI_SALSV5.803e-1131.55Isopentenyl-diphosphate Delta-isomerase OS=Salmone... [more]
IDI_SALPK5.803e-1131.55Isopentenyl-diphosphate Delta-isomerase OS=Salmone... [more]
IDI_SALPC5.803e-1131.55Isopentenyl-diphosphate Delta-isomerase OS=Salmone... [more]
IDI_SALPB5.803e-1131.55Isopentenyl-diphosphate Delta-isomerase OS=Salmone... [more]
IDI_SALPA5.803e-1131.55Isopentenyl-diphosphate Delta-isomerase OS=Salmone... [more]
IDI_SALNS5.803e-1131.55Isopentenyl-diphosphate Delta-isomerase OS=Salmone... [more]
IDI_SALHS5.803e-1131.55Isopentenyl-diphosphate Delta-isomerase OS=Salmone... [more]
IDI_SALEP5.803e-1131.55Isopentenyl-diphosphate Delta-isomerase OS=Salmone... [more]
IDI_SALDC5.803e-1131.55Isopentenyl-diphosphate Delta-isomerase OS=Salmone... [more]
IDI_SALCH5.803e-1131.55Isopentenyl-diphosphate Delta-isomerase OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-F08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702410 ID=EY702410; Name=EY702410; organism=Citrus sinensis; type=EST; length=908bp
TTCGTCGACCCACGCGTCCGGTCCCGTCTATTTCTCTCCTCTTCCCATTT
CGCCCCTAGGGTTTCTTCGATTCGCAGGCCTCTGTCCTTGAGAGGTGCCT
CTCGTTCTAGCTCTTCTTCTTCTTCCGCTCGCGCAATCAGCACTATGGGT
GACGCTACTACTGATGCCGGCATGGACGCTGTCCAGCGCCGCCTCATGTT
TGAAGACGAATGCATTTTGGTGGATGAGAATGATCGCGTTGTTGGTCATG
AAAACAAATACAACTGTCACTTGATGGAAAAGATTGAGTCTTTGAATTTG
CTACACAGAGCCTTCAGCGTATTTTTGTTTAACTCAAAATATGAGCTACT
CCTTCAGCAACGCTCTGGAACCAAAGTTACCTTCCCTCTTGTGTGGACTA
ACACCTGCTGCAGCCATCCTCTGTACCGTGAATCTGAGCTTATTGAGGAG
AACGCTCTTGGGGTGAGGAATGCTGCACAAAGAAAGCTTTTGGATGAGCT
GGGCATTTGTGCTGAAGATGTGCCAGTTGATGAGTTCACTCCACTGGGTC
GCATTCTGTACAAGGCCCCTTCTGATGGCAAGTGGGGGGAGCATGAACTT
GACTACTTATTTTTCATTGTCCGAGATGTTAGTGTTAACCCAAATCCTGA
TGAAGTAGCCGAGTATAAATATGTCAACCGGGAACAGGTAAAAGAGCTTT
TGAGGAAAGCAGATGCTGGAGAAGAAGGGTTGAAGCTGTCTCCTTGGGTC
AGACTGGTTGTGGACCATTTCTTGTTCAAGTGGTGGGATCACCCCCAAAA
GGACCCTTAACAAGTCATTGACATGAGACCATCCCAAGTTGACTTATAAA
GCCGCAGGCCTTGAACCCAGTATTTGGTGGCGGGACCTGGATTCCATAGG
TTGGGCAT
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