EY702375

Overview
NameEY702375
Unique NameEY702375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 9.111e-67
Identity = 121/170 (71.18%), Postives = 136/170 (80.00%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P   +GLFLARK+SL R + Y+V QCLGAICG G VK F  +  Y R  GGAN +A GY KG GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN ++ WDD WIFWVGP +GA  AA YHQ ++RA   K
Sbjct:  108 PAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSS-YYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIK 276          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.554e-66
Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 503
            P    GLFLARK+SL RAL Y+  Q LGAICG  +VKGF  +G Y R  GGAN V+ GY+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN  + W D WIFWVGPF+GA +AALYHQ+V+RA
Sbjct:  112 PAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQ-SGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 276          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.651e-66
Identity = 122/166 (73.49%), Postives = 138/166 (83.13%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 503
            P    GLFLARK+SL RA+ Y+V Q LGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+ + W DHWIFWVGP +GA +AA YHQ V+RA
Sbjct:  113 PAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAF-YVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRA 277          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.651e-66
Identity = 121/166 (72.89%), Postives = 135/166 (81.33%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 503
            P    GLFLARK+SL RA+ Y+V QCLGAICG G VK F  +  Y    GGAN +A GY  G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+NK + WDDHWIFWVGPF+GA +AA YHQ V+RA
Sbjct:  106 PAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSS-HYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRA 270          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.007e-65
Identity = 117/170 (68.82%), Postives = 135/170 (79.41%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFL RK+SL RAL Y++ QC GAICGAG+ KGF  +  Y R  GG N V+ GY KG  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARS G A+I+N D+ WDD WI+WVGPFVGA +AA+YHQ ++R    K
Sbjct:  110 PAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSF-YNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIK 278          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.007e-65
Identity = 121/166 (72.89%), Postives = 136/166 (81.93%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 503
            P    GL LARK++L RA+ Y+V QCLGAICG  +VK F  A  + R  GGAN ++ GY+ G G+ AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAAIIYNKD+ WD HWIFWVGPF GA +AA YHQ V+RA
Sbjct:  107 PAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSA-YFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRA 271          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 6.529e-65
Identity = 119/170 (70.00%), Postives = 136/170 (80.00%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GL LARK+S+ RA+ Y+V QCLG I G G+VKG M   QY    GGAN+VA GY+ G  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+IYN+ + WDDHWIFW GPF+GA  AA YHQ ++RA   K
Sbjct:  103 PAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIM-KHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIK 271          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.900e-64
Identity = 117/166 (70.48%), Postives = 134/166 (80.72%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 503
            P    GLFLA K+SL RA+ Y+V QCLGA CG G+VK F     Y R  GGAN+++ GY  G G+GAEIIGTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGF+VF+VHLATIPITGTGINPARS GAA+IYN  + WDD WIFWVGPFVGA +AA YHQ V+RA
Sbjct:  107 PAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQST-YYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRA 271          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.505e-61
Identity = 113/165 (68.48%), Postives = 131/165 (79.39%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 500
            P   LGLF  RKLSL R + Y+V QCLGAI GAG+VKG M    Y  L GGAN V+ GY+    LGAEI+GTF+LVYTVFSATD KR+ARDS +P+L PLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN+   W DHWIFWVGP +GA LAA YH++V+R
Sbjct:  110 PAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKR-PYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLR 273          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.782e-54
Identity = 102/172 (59.30%), Postives = 123/172 (71.51%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII--YNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P     + LAR++SL RA  Y + QC+GA+CGAG+ +   G GQY R  GGAN +A GY+ G G+ AE++GTFVLVYTVFSATD KR ARDSHVP+LAPLPIG AV +VHLATIPITGTGINPARSLG A++      + W   WIFWVGPF GA  A +YH  ++R    K
Sbjct:   97 PAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAK 268          
The following BLAST results are available for this feature:
BLAST of EY702375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
PIP24_ARATH9.111e-6771.18Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP26_MAIZE1.554e-6672.89Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP23_ORYSJ2.651e-6673.49Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP23_ARATH2.651e-6672.89Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP27_MAIZE1.007e-6568.82Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP25_ARATH1.007e-6572.89Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP26_ORYSJ6.529e-6570.00Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP26_ARATH1.900e-6470.48Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP27_ORYSJ1.505e-6168.48Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ORYSJ1.782e-5459.30Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702375 ID=EY702375; Name=EY702375; organism=Citrus sinensis; type=EST; length=873bp
ATCAACCCTTCGCTGAACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTG
ACACGTGCACTTTTCTACCTGGTGATGCAGTGTCTGGGAGCCATCTGCGG
TGCTGGCGTTGTTAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCG
CCGGCGGTGCCAACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTT
GGTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGC
CACTGATGCCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTC
CTCTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCA
ATTACCGGAACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCAT
CTACAACAAGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGAC
CATTCGTTGGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGA
GCCATTCCCTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCA
CCTGCATTTGTTTATGGCTGTTGCTGGTTTGCTTATGTGTATTATAAAAT
ATTAATTAGTCCTTTGTTCAAATCTGCTGGTGCTGGACCTGGGCCTGCTT
CTCTGTTTTCCTTCCTTAAAACGTTTTTTTTTTTTTTTTAATTTTGAAAG
AGAGTGGATGATGATGACGGATGGGCCCATGGTTAAGTANGTGGGCGCTG
TCACTTTGTACATTTGTATGCCTATGGATTTGTGCAATGTCATCTTGGGA
ATAATATGGACNAAACTAGTTCTATTNNAAAAAAAAAAAAAAAAAAAAAA
AAAGGCGGCCGCTCTAAAGATCC
back to top