EY702372

Overview
NameEY702372
Unique NameEY702372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_RHOPB (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain BisB18) GN=atpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.503e-27
Identity = 85/216 (39.35%), Postives = 120/216 (55.56%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISK--SLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS+ V++++  +L  +N G  KE K   +G K    L R   + I   I       L +     +A  ++    N EFD   + YS+F SV+S +PT   ++ P +VE  A + G      SYE E  E   EIL  L     +  +F A+LEN  S  GA+MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSSIVRLARERALSLMNQG--KEVKLFCVGRKGYEQLRRTFDRQIVENIELRSVRQLGFVNAEDIAHKVVARFNNGEFDVCTLFYSRFKSVISQIPTAQQII-PLVVEAPAANAGPA---TSYEYEPEED--EILAGLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEIISGAEAI 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_RHISN (ATP synthase gamma chain OS=Rhizobium sp. (strain NGR234) GN=atpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.503e-27
Identity = 82/222 (36.94%), Postives = 121/222 (54.50%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS----YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   + ++   +      K  K + +G+K   IL R+    I   + + E++K    N  ++     ++ +  EFD   + YS+F SV+S +PT   ++        A +G    E DS    YE E       IL +L     S  +F A+LEN   E GA+MSAMD+++RNAGEM+++LTL YNR RQA IT ELIEIISGA AL
Sbjct:   81 LVVCTAERGLCGGFNSQIARFARDHVRKLLAQGKTVKIICVGKKGFDILRREFASLIIDRVDLREVKKIGFENADRIGHKVIELFEKGEFDVCTLFYSEFKSVISQVPTAQQLIP-------ASAGPVAAEADSASAVYEYE--PDAAAILTDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLNYNRQRQAQITKELIEIISGAEAL 293          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_SPHAL (ATP synthase gamma chain OS=Sphingopyxis alaskensis GN=atpG PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.799e-27
Identity = 79/219 (36.07%), Postives = 120/219 (54.79%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLS-PELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  ++SD+GL G  NS  VK ++          K+  + ++G K + ++ R     I           + + Q S ++  +++  E   FD   + YSKF S +  + T   ++  P   E  A SG  +      E E GE   EIL +L     +  +F  +LENA SEQGA M+AMD+++RNAGE++++LT+ YNRTRQA+ITTELIEII+GA AL
Sbjct:   81 LVVLNSDRGLAGAFNSNIVKAARDKALELQSQGKKVLFYLVGRKGRPVIARLFPGQIIEQYDTTGIRDIGFDQASEISARVMELYEAGAFDVAHLFYSKFRSALLQIATGQQMIPVPPPAEAPASSGAAV------EYEPGEE--EILADLLPRNVTIQIFKGLLENAASEQGASMTAMDNATRNAGELINKLTIIYNRTRQAAITTELIEIIAGAEAL 291          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BDEBA (ATP synthase gamma chain OS=Bdellovibrio bacteriovorus GN=atpG PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.799e-27
Identity = 73/224 (32.59%), Postives = 129/224 (57.59%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPEL----VEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 658
            +  I+SD+GLCG  NS   K +++ +  N    ++  ++ +G +      R   K ++ I T+L K+ ++Y   S +A+ ++ +     +D +RI++++F S +S + T  T+L  +L     ++EA++         +E        +I++ L E  F   ++  + E+   E GARMSAM++++ NA EM+++LTLTYN+ RQ  ITTELIEI+SGA AL+G
Sbjct:   78 LVVITSDRGLCGAFNSNINKFAEAYYNSNKASLEKIDFLFVGRRGHDYFARRGIKAVDYI-TKLDKD-ISYELASKVANRVMNDYLEGSYDEVRIVHNEFKSAISQVVTAETLLPIDLGMTTFKKEADTASNFAVDMIFE----PAPEQIIKELLEKHFELQVYRCMSESVAGEHGARMSAMENATNNAKEMINKLTLTYNKLRQEKITTELIEIVSGAEALKG 295          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_NOVAD (ATP synthase gamma chain OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=atpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 76/219 (34.70%), Postives = 122/219 (55.71%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIEL-IITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  +++DKGLCGG+NS  +K +K   +      K   + ++G+K +A + RD    I     T L + P  + + + +A ++L   E   FD   ++  +F + ++ LP    ++              +      E E GE   EIL+ L     +  +F A+LE   SEQGA M+AMD+++RNAGE++++LT+ YNR+RQA+ITTELIEII+GA AL
Sbjct:   81 LVVVNTDKGLCGGLNSNIIKEAKLQARALEAAGKTVTFYLVGKKGRAPIRRDYPNGIAAGYDTSLVRTP-GFDEAAAIAQELLALFEAGKFDVAHLVAPEFKNALTQLPVTTQIIPVPAPTNTVAIDAVV------EYEPGEE--EILEELLPRYVTTQIFGALLEREASEQGASMTAMDNATRNAGELINKLTIQYNRSRQAAITTELIEIIAGAEAL 290          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_GRABC (ATP synthase gamma chain OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=atpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 77/220 (35.00%), Postives = 118/220 (53.64%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKL--GELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  IS+D+GL G  N+   + +++L        K  K + +G KA+  L RD +  +    +   K  L +     L+  I   +   EFD   ++Y+ F+SV+S  P    ++  ++ +      G    G    YE E  E    +L  L     +  ++ A+LE+A  E  ARM+AMD+++RNAG+M+ RL+LTYNRTRQA+IT ELIEIISGA AL
Sbjct:   81 LVVISADRGLAGAFNTNVGRAARTLANRLESEGKTVKILTVGRKARDYLRRDLETRLLPETSLAGKKVLAFADALALSQQITARLDAGEFDVCTLVYNHFNSVISQTPGETQLIPAQVPQAAPADAGASSNGAKAVYEFEPDEET--LLAKLLPQNLAIQIYRAILESAAGEHAARMTAMDNATRNAGDMIKRLSLTYNRTRQANITRELIEIISGAEAL 298          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_GLUDA (ATP synthase gamma chain OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=atpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 76/218 (34.86%), Postives = 122/218 (55.96%), Query Frame = 2
Query:   17 ISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLAD------DILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            ++SD+GL G  N+   + ++ L +      K  + +  G K    L+R+     +LI+  +  +       S  A+       +L+  EFD   ++Y++F++V+S  PT   ++   +   +  + G   E  SYE E GE   ++L +L        ++  +LE+A  EQGARM+AMD+++RNAG+ +DRLTLTYNRTRQ +IT ELIEIISGA A+
Sbjct:   84 MTSDRGLAGAFNANINRTTRDLIRRLQAEGKTIRLLPTGRKGYEFLMREFS---DLIVDHVHGSGGKEVPFSAAAELGERLTAMLEKGEFDVCTVVYNRFNNVMSQTPTEMQLIPLAVPANDTVASG---ERASYEFEPGEE--QLLSSLLPRNLQVQLYATMLESAAGEQGARMTAMDNATRNAGKAIDRLTLTYNRTRQTNITNELIEIISGAQAV 293          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRUME (ATP synthase gamma chain OS=Brucella melitensis GN=atpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 78/218 (35.78%), Postives = 116/218 (53.21%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++ +GLCGG NS   ++++   +      K  K + +G+K   IL R+    +   +   +   L +     +   I+K  E   FD   + YS+F SV+S + T A  L P   + EAE       +  YE +       IL  L     S  +F A+LEN   E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRUMB (ATP synthase gamma chain OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=atpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 78/218 (35.78%), Postives = 116/218 (53.21%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++ +GLCGG NS   ++++   +      K  K + +G+K   IL R+    +   +   +   L +     +   I+K  E   FD   + YS+F SV+S + T A  L P   + EAE       +  YE +       IL  L     S  +F A+LEN   E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRUAB (ATP synthase gamma chain OS=Brucella abortus GN=atpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 78/218 (35.78%), Postives = 116/218 (53.21%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++ +GLCGG NS   ++++   +      K  K + +G+K   IL R+    +   +   +   L +     +   I+K  E   FD   + YS+F SV+S + T A  L P   + EAE       +  YE +       IL  L     S  +F A+LEN   E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292          
The following BLAST results are available for this feature:
BLAST of EY702372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_RHOPB7.503e-2739.35ATP synthase gamma chain OS=Rhodopseudomonas palus... [more]
ATPG_RHISN7.503e-2736.94ATP synthase gamma chain OS=Rhizobium sp. (strain ... [more]
ATPG_SPHAL9.799e-2736.07ATP synthase gamma chain OS=Sphingopyxis alaskensi... [more]
ATPG_BDEBA9.799e-2732.59ATP synthase gamma chain OS=Bdellovibrio bacteriov... [more]
ATPG_NOVAD1.280e-2634.70ATP synthase gamma chain OS=Novosphingobium aromat... [more]
ATPG_GRABC1.280e-2635.00ATP synthase gamma chain OS=Granulibacter bethesde... [more]
ATPG_GLUDA1.280e-2634.86ATP synthase gamma chain OS=Gluconacetobacter diaz... [more]
ATPG_BRUME1.280e-2635.78ATP synthase gamma chain OS=Brucella melitensis GN... [more]
ATPG_BRUMB1.280e-2635.78ATP synthase gamma chain OS=Brucella melitensis bi... [more]
ATPG_BRUAB1.280e-2635.78ATP synthase gamma chain OS=Brucella abortus GN=at... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702372 ID=EY702372; Name=EY702372; organism=Citrus sinensis; type=EST; length=904bp
AGAATGTATTGCGACCATCTCTTCTGACAAAGGTCTATGTGGTGGAATTA
ACTCTACTGCAGTTAAGATAAGCAAGAGTTTGCACAAGTTGAATTCTGGT
CCCGACAAAGAAAACAAATACGTCATCTTGGGAGAGAAGGCAAAGGCAAT
ATTAGTACGTGACTCGAAGAAAGATATTGAACTCATCATAACTGAGTTAC
AGAAAAATCCTCTAAATTATACCCAGGTTTCCGTTCTTGCAGATGATATC
TTAAAGAATGTAGAATTTGATGCTTTGAGGATTATCTATAGCAAGTTCCA
TTCTGTGGTCTCCTTTCTGCCGACAATGGCAACTGTATTATCGCCTGAGC
TTGTGGAGAGAGAAGCCGAATCTGGGGGAAAGCTTGGTGAGCTAGACTCC
TATGAAATTGAAGGCGGTGAAACAAAGGGTGAAATACTTCAAAATCTGGC
TGAGTTCCAATTCTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGCTT
GCAGTGAGCAAGGGGCAAGGATGTCTGCCATGGATAGCTCAAGCAGAAAT
GCGGGAGAAATGCTTGATCGCCTCACTCTTACTTATAACAGAACTCGTCA
AGCATCTATCACCACCGAGTTGATTGAGATTATATCTGGAGCATCAGCAC
TGGAAGGCTGATTACAAAAGCGACAGTGCTCACTTTTCTTGACAGTGACG
AAATAATCCTTGGTGGANGGCTTGNTCAAACTTCATGTGGTACTTTCATA
AGAGTTTTTGTTGAGCTACTCCANNTATCTCTCCAGTGTCAAAACTTCTT
TTTGGGGAATTACANTTATACTTGCGATATTTTCCATATAGTTTTTGATC
CTCCATTATGTGCCTTTGCAGTGACATAAATGGCTTGGNTGTTGGGACTC
CCAG
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