CX078085

Overview
NameCX078085
Unique NameCX078085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.531e-28
Identity = 58/145 (40.00%), Postives = 91/145 (62.76%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            +F +AK  G T+ +NP++ +KPVQ VI +MTNGGVD +++C G  + M +  +C   GWG    VGV   D      P+ L+  RTLKGT FG +   + +P +V  Y N + +++  +THT+PF +IN+A +L+  G+SIR ++
Sbjct:  234 KFAKAKALGATDCLNPRELNKPVQDVIVEMTNGGVDFAIDCAGGSEVMKATVDCATVGWGSCTFVGVNLADKGLTISPIELILGRTLKGTNFGGWDAET-VPKLVSDYKNGKFDLDALVTHTLPFDKINEALNLLDQGKSIRTVL 377          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.009e-27
Identity = 53/149 (35.57%), Postives = 93/149 (62.42%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            P +F   ++ G++EF+NPK+ DK V + + ++T GGV+ S EC GS++A+  AF   + G GV V++GV         HPM L   R++  + FG +KP++ LP  + + +   L ++ FI+H +PF +IN+A  L+  G+++RC++ +
Sbjct:  232 PDKFQLGREAGISEFINPKESDKAVHERVMEITEGGVEYSFECAGSIEALREAFLSTNSGVGVTVMLGVHASPQLLPIHPMELFQGRSITASVFGGFKPKTQLPFFITQCLQGLLNLDLFISHQLPFHDINEAMQLLHQGKALRCLLHL 380          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.318e-27
Identity = 59/146 (40.41%), Postives = 91/146 (62.33%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            +F +AK+ G TE VNP DY KP+ +V+ DMT+G GV+ S E  G    M +A    H+ +G +V+VGVP         P+ L   RT KG+ FG +K +  +P +V  +M K+  ++  ITHT+PF +IN+ F+L+ +G+SIR ++
Sbjct:  228 KFPKAKELGATECVNPLDYKKPINEVLFDMTDGEGVEYSFEVIGRTDTMTAALASCHNNYGTSVIVGVPPSASQIAFDPLLLFTGRTWKGSVFGGWKSKDAVPRLVSDFMGKKFILDPLITHTMPFEKINEGFELLRSGKSIRTVL 373          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.249e-27
Identity = 61/151 (40.40%), Postives = 89/151 (58.94%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDY-DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            P +F   KKFG T+F+N     +  + +VI +MT GGVD S EC G    +  AF     G G  V++G+            +LL  R + G+ FG  KP+ D+P +V+ Y+ KEL ++ FITH + F EINKAFDL++ G+S+RCI+ M+
Sbjct:  238 PEKFELGKKFGFTDFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKHLTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINKAFDLLVQGKSLRCILWMN 388          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.249e-27
Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   15 NEAKK-----FGVTEFVNPKDYDKPVQQVIADMTN------GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            N AKK     FG+T FVNP + D  V   + +MT       GG D + +CTG+V+ M  A E  H GWG ++++GV       +T P  L+  R  KG+ FG  + R+D+P +V+ YM  +++++  ITH +   EINK FDLM AGESIR ++
Sbjct:  221 NNAKKEWGERFGMTHFVNPSEIDGDVVAHLVNMTKTPFDQIGGADYTFDCTGNVKVMRQALEACHRGWGQSIVIGVAPAGAEIQTRPFQLVTGRVWKGSAFGGARGRTDVPKIVDWYMEGKIQIDPMITHILSLEEINKGFDLMHAGESIRSVV 374          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.249e-27
Identity = 58/145 (40.00%), Postives = 87/145 (60.00%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            +F  AK+ G TE +NPKDY+ P+ +V+A MT+ GVD + E  G+   M SA    H G G  V+VG+          P+ +L  R L G  FG +K + D+P +V  Y+NK+ + +  ITH +PF +IN+ F+L+  G+SIR I+
Sbjct:  229 KFTTAKECGATECINPKDYNIPIHEVLAKMTDDGVDYAFEVIGNTTVMTSALSSSHFGCGKTVIVGLAPSSAVMSFDPLLILTGRILTGAVFGGWKSKDDVPKLVRDYLNKKFDFDPLITHYMPFEKINEGFELLRNGKSIRTIL 373          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.937e-27
Identity = 61/142 (42.96%), Postives = 85/142 (59.86%), Query Frame = 3
Query:   24 KKFGVTEFVNPKDYDKPVQQV--IADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            +K G T FVNP    +    V  + +MT+GG D + +CTG+V  M +A E  H GWG +V++GV        T P  L+  RT KG  FG  K RS LP +V  Y++ +L+VE+FITH  P + INKAF+ M AG+ IR ++
Sbjct:  237 QKLGATAFVNPTKLPEGTTIVDKLIEMTDGGCDFTFDCTGNVGVMRNALEACHKGWGTSVIIGVAAAGKEISTRPFQLVTGRTWKGAAFGGVKGRSQLPGIVNNYLDGKLKVEEFITHREPLAAINKAFEEMHAGDCIRAVV 378          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.937e-27
Identity = 59/151 (39.07%), Postives = 92/151 (60.93%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKP-VQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNE-RTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            P++F   +KFGVTEFVN    +K  V +VI +MT+GG D   EC GS   +  A+ C   GWG  + +GV            ++L+  + L G+ FG  K ++ +P ++++Y++ ELE++KF+TH + F EIN AF L+L G+ IRC++ M
Sbjct:  239 PTKFQVGQKFGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEINDAFQLLLEGKCIRCVLWM 389          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 3.836e-27
Identity = 56/145 (38.62%), Postives = 96/145 (66.21%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            +F +A + G TE +NPKDYDKP+ +VI + TNGGVD +VEC G ++ M++A +  + G GV V++G+ + ++     P+ LL  R+LKG+ FG +K   ++  +V+ YM K++ V   ++  +   +INKAF+L+ +G+ +R I+
Sbjct:  228 KFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIM 371          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.010e-27
Identity = 54/145 (37.24%), Postives = 89/145 (61.38%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            +F +A   G TE ++PKD  KP+ +V++DMT   V  + E  G ++ M+ A    H  +G +V+VG P         PM L   RT KG  FG +K R D+P +V +++ K+ ++++ ITHT+PF+ IN+ F+L+ +G+SIR ++
Sbjct:  228 KFQKALAVGATECISPKDSTKPISEVLSDMTGNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLTYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTEFLEKKFDLDQLITHTLPFNNINEGFELLYSGKSIRTVL 372          
The following BLAST results are available for this feature:
BLAST of CX078085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADHP_RABIT4.531e-2840.00Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADHL4_ARATH1.009e-2735.57Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADH1B_UROHA1.318e-2740.41Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADHL5_ARATH2.249e-2740.40Alcohol dehydrogenase-like 5 OS=Arabidopsis thalia... [more]
ADHI_RHOS42.249e-2740.26Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADH1_RANPE2.249e-2740.00Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
FADH_CANMA2.937e-2742.96S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADHL7_ARATH2.937e-2739.07Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]
ADH8_RANPE3.836e-2738.62NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH7_MOUSE5.010e-2737.24Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_6H05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6H05-O10-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078085 ID=CX078085; Name=CX078085; organism=Citrus sinensis; type=EST; length=619bp
ACCCAAGCAGATTCAATGAAGCCAAGAAGTTTGGGGTTACCGAGTTTGTG
AATCCAAAAGATTATGACAAACCTGTTCAACAGGTGATTGCTGACATGAC
CAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGAAGCGTCCAGGCCA
TGATTTCAGCATTTGAATGCGTTCACGATGGTTGGGGTGTTGCTGTGCTT
GTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTCATCCCATGAATCT
GCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGCAACTACAAACCTC
GCTCTGATCTTCCTTCTGTTGTTGAAAAATACATGAACAAGGAGTTGGAG
GTCGAGAAATTCATCACTCACACTGTGCCCTTCTCGGAGATAAACAAGGC
ATTTGACCTCATGCTTGCGGGAGAAAGCATTAGGTGCATCATTCGCATGG
ATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAATGGAGGCAGAATGA
AGATGATCACATAATTTTCCAAGTTATATATTACCCCGAGAATAAGTAAT
TTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTTTCAAAGAGTTGTG
TTTTCTACATAAAAAAAAA
back to top