EY702350

Overview
NameEY702350
Unique NameEY702350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702350 vs. ExPASy Swiss-Prot
Match: SYP_ONYPE (Prolyl-tRNA synthetase OS=Onion yellows phytoplasma GN=proS PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.989e-21
Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 2
Query:  191 KDDNFGEWYSEVVVNGEMIEYYDISGCYIMRPWAISIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEGPIAIRPLVKL*CIPTFRRE*GGILTCHETY-QWCNCVLGIHHSTP-LSGAGFSWEEGYCFSPSQNQ 667
            +  +FG+WY++V +  E+I Y +  G  I  P+  ++WE +QK  +  ++K   QN YFPL     +  KEK+HI+GF+PE A +T +G+ +L   + IRP  ++     + +         + Y QWCN V     + P L G  F W+EG+    ++ +
Sbjct:   13 RSSDFGKWYTDVCLKAELIAYSEAKGFIIYLPYGYALWENIQKHLNCTLQKTGHQNVYFPLVFPEKLFHKEKNHIQGFSPEAAMITTTGKKNLSEKLVIRPTSEILFSQYYSKTITSYRDLPKLYNQWCNVVRWEKTTKPFLRGKEFLWQEGHTVHATEQE 173          
BLAST of EY702350 vs. ExPASy Swiss-Prot
Match: SYP_SOLUE (Prolyl-tRNA synthetase OS=Solibacter usitatus (strain Ellin6076) GN=proS PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.164e-21
Identity = 42/102 (41.18%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  191 KDDNFGEWYSEVVVNGEMIEYYDI-SGCYIMRPWAISIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEGPIAIRP 493
            +  +F  WY +VV+ G+M E  +I  GC +++    ++WE +Q+  D   K    QN YFPL +  + L+KE +H+EGFAPE+A VT +G  +LE P  IRP
Sbjct:    9 RSQDFAAWYQDVVLQGDMAEPAEIVKGCMVIKANGYAVWEVLQRELDDRFKATNHQNVYFPLLIPQSFLKKEAEHVEGFAPELAVVTVAGGKELEEPYVIRP 110          

HSP 2 Score: 29.261 bits (64), Expect = 4.164e-21
Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  478 YCNSPTSETVMYPYFSKGIRGHPDLP 555
            Y   PTSET++  +FSK I  + DLP
Sbjct:  106 YVIRPTSETIIGHFFSKWIHSYRDLP 131          
BLAST of EY702350 vs. ExPASy Swiss-Prot
Match: SYP_RUBXD (Prolyl-tRNA synthetase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=proS PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.210e-21
Identity = 57/167 (34.13%), Postives = 87/167 (52.10%), Query Frame = 2
Query:  188 KKDDNFGEWYSEVVVNGEMIEYYDISGCYIMRPWAISIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEGPIAIRPLVKL*CIPTFRRE*GGILTCHE----TYQWCNCVLGIHHSTP-LSGAGFSWEEGYCFSPSQNQRR 673
            KK ++   WY E+V   ++ +Y  + G + +RP+  +IWE +Q   DA  K     N YFPL +  + L KE +H+EGFAPE AWVT  G+ +LE  +AIRP  +      +R+    I +  +      QWCN +     + P L  A F W+EG+    +  + R
Sbjct:   10 KKSEDSSRWYLELVRMAKLADYGPVRGTFAIRPYGFAIWERIQADLDARFKATGHVNAYFPLLIPESYLTKEAEHVEGFAPECAWVTVGGDDELEERLAIRPTSESIICDFYRK---WIHSYRDLPVLINQWCNVLRWEMVTRPFLRTAEFLWQEGHTVHATAEEAR 173          
BLAST of EY702350 vs. ExPASy Swiss-Prot
Match: SYP_BORAP (Prolyl-tRNA synthetase OS=Borrelia afzelii (strain PKo) GN=proS PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.416e-21
Identity = 36/101 (35.64%), Postives = 62/101 (61.39%), Query Frame = 2
Query:  191 KDDNFGEWYSEVVVNGEMIEYYDISGCYIMRPWAISIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEGPIAIRP 493
            K+D++ +WY ++V   ++ +Y  + GC ++ P+  SIW  +Q   D + K+   +N YFP+ +    L+KEKDHI+GF+PE A +  +G   L  P+ +RP
Sbjct:    8 KEDDYSKWYLDIVQKAKLADYSPVKGCMVIMPYGYSIWSKIQSILDKKFKETGHENAYFPMLIPYGFLEKEKDHIDGFSPEFAIIKDAGGESLVEPLVLRP 108          

HSP 2 Score: 28.4906 bits (62), Expect = 5.416e-21
Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = 1
Query:  490 PTSETVMYPYFSKGIRGHPDLP 555
            PTSET+++  +SK I+ + DLP
Sbjct:  108 PTSETIIWNMYSKWIKSYRDLP 129          
BLAST of EY702350 vs. ExPASy Swiss-Prot
Match: SYP_AYWBP (Prolyl-tRNA synthetase OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=proS PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.804e-21
Identity = 50/158 (31.65%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  200 NFGEWYSEVVVNGEMIEYYDISGCYIMRPWAISIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEGPIAIRPLVKL*CIPTFRRE*GGILTCHETY-QWCNCVLGIHHSTP-LSGAGFSWEEGYCFSPSQNQ 667
            +FG+WY+++ +  E+I Y +  G  I  P+  ++WE +QK  +  ++K   QN YFPL     +  KEK+HI+GF+PE A +T +G+ +L   + IRP  ++     + +         + Y QWCN V     + P L G  F W+EG+    ++ +
Sbjct:   16 DFGKWYTDICLKAELIAYSEAKGFIIYLPYGYALWENIQKHLNCTLQKTGHQNVYFPLVFPEKLFHKEKEHIQGFSPEAAMITTTGKKNLSEKLVIRPTSEILFSQYYSKTITSYRDLPKLYNQWCNVVRWEKTTKPFLRGKEFLWQEGHTVHATEQE 173          
BLAST of EY702350 vs. ExPASy Swiss-Prot
Match: SYP_ROSS1 (Prolyl-tRNA synthetase OS=Roseiflexus sp. (strain RS-1) GN=proS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.046e-21
Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 2
Query:  200 NFGEWYSEVVVNGEMIEYYDI-SGCYIMRPWAISIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEGPIAIRP 493
            ++ +WY ++V   ++ +Y ++  GC + +P   +IWE +Q+  D  IK     N YFPL +  + L KE +H+EGFAPEVA VT++G  DL  P  IRP
Sbjct:   12 DYSQWYLDIVQQADLADYAEVVKGCIVFKPTGYAIWEAIQRGLDDRIKATGHVNAYFPLLIPKSFLMKEAEHVEGFAPEVAEVTRAGGEDLAEPYVIRP 110          

HSP 2 Score: 29.261 bits (64), Expect = 7.046e-21
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  478 YCNSPTSETVMYPYFSKGIRGHPDLP 555
            Y   PTSET++  ++SK +R + DLP
Sbjct:  106 YVIRPTSETIIGYFYSKWVRSYRDLP 131          
BLAST of EY702350 vs. ExPASy Swiss-Prot
Match: SYP_ROSCS (Prolyl-tRNA synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=proS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.192e-20
Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = 2
Query:  200 NFGEWYSEVVVNGEMIEYYDI-SGCYIMRPWAISIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEGPIAIRP 493
            ++ +WY ++V   ++ +Y ++  GC + +P   ++WE +Q+  D  IK     N YFPL +  + L KE +H+EGFAPEVA VT++G  DL  P  IRP
Sbjct:   12 DYSQWYLDIVQQADLADYAEVVKGCIVFKPTGYALWEAIQRGLDDRIKATGHVNAYFPLLIPKSFLMKEAEHVEGFAPEVAEVTRAGGEDLAEPYVIRP 110          

HSP 2 Score: 29.261 bits (64), Expect = 1.192e-20
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  478 YCNSPTSETVMYPYFSKGIRGHPDLP 555
            Y   PTSET++  ++SK +R + DLP
Sbjct:  106 YVIRPTSETIIGYFYSKWVRSYRDLP 131          
BLAST of EY702350 vs. ExPASy Swiss-Prot
Match: SYP_CHLT3 (Prolyl-tRNA synthetase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=proS PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.624e-20
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 2
Query:  200 NFGEWYSEVVVNGEMIEYYDISGCYIMRPWAISIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEGPIAIRP 493
            ++ +WY ++V   ++ +Y D+ GC ++RP   +IWE MQ   D   K+    N YFPLF+  + +QKE +HIEGFAPE A VT  G  +L+  + +RP
Sbjct:   11 DYSQWYIDIVRFAKLADYSDVRGCMVIRPNGYAIWEKMQAALDRMFKETGHVNAYFPLFIPESFIQKEAEHIEGFAPECAVVTHGGGEELQEKLYVRP 108          

HSP 2 Score: 26.5646 bits (57), Expect = 2.624e-20
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 1
Query:  490 PTSETVMYPYFSKGIRGHPDLP 555
            PTSET+++  + K I+ + DLP
Sbjct:  108 PTSETIIWSSYKKWIQSYRDLP 129          
BLAST of EY702350 vs. ExPASy Swiss-Prot
Match: SYP_CHLL2 (Prolyl-tRNA synthetase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=proS PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.624e-20
Identity = 40/101 (39.60%), Postives = 62/101 (61.39%), Query Frame = 2
Query:  191 KDDNFGEWYSEVVVNGEMIEYYDISGCYIMRPWAISIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEGPIAIRP 493
            +  ++ +WY ++V + ++ +Y D+ GC ++RP   +IWE MQ   DA  K+    N YFPLF+  + + KE +HIEGFAPE A VT  G  +L   + +RP
Sbjct:    8 RSQDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDAMFKETGHVNAYFPLFIPESYIAKEAEHIEGFAPECAVVTHGGGEELAEKLYVRP 108          

HSP 2 Score: 26.5646 bits (57), Expect = 2.624e-20
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 1
Query:  490 PTSETVMYPYFSKGIRGHPDLP 555
            PTSET+++  + K I+ + DLP
Sbjct:  108 PTSETIIWASYKKWIQSYRDLP 129          
BLAST of EY702350 vs. ExPASy Swiss-Prot
Match: SYP_PROA2 (Prolyl-tRNA synthetase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=proS PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.412e-20
Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 2
Query:  191 KDDNFGEWYSEVVVNGEMIEYYDISGCYIMRPWAISIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEGPIAIRP 493
            ++ ++ +WY ++V + ++ +Y D+ GC I+RP   +IWE MQ   DA  K     N YFPLF+  + ++KE +HIEGFAPE A VT  G   L   + +RP
Sbjct:    8 RETDYSQWYIDLVRSAKLADYSDVRGCMIIRPNGYAIWEKMQAALDAMFKATGHVNAYFPLFIPESFIKKEAEHIEGFAPECAVVTHGGGEQLAENLYVRP 108          

HSP 2 Score: 26.5646 bits (57), Expect = 3.412e-20
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 1
Query:  490 PTSETVMYPYFSKGIRGHPDLP 555
            PTSET+++  + K I+ + DLP
Sbjct:  108 PTSETIIWSSYKKWIQSYRDLP 129          
The following BLAST results are available for this feature:
BLAST of EY702350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
SYP_ONYPE3.989e-2131.68Prolyl-tRNA synthetase OS=Onion yellows phytoplasm... [more]
SYP_SOLUE4.164e-2141.18Prolyl-tRNA synthetase OS=Solibacter usitatus (str... [more]
SYP_RUBXD5.210e-2134.13Prolyl-tRNA synthetase OS=Rubrobacter xylanophilus... [more]
SYP_BORAP5.416e-2135.64Prolyl-tRNA synthetase OS=Borrelia afzelii (strain... [more]
SYP_AYWBP6.804e-2131.65Prolyl-tRNA synthetase OS=Aster yellows witches'-b... [more]
SYP_ROSS17.046e-2140.40Prolyl-tRNA synthetase OS=Roseiflexus sp. (strain ... [more]
SYP_ROSCS1.192e-2039.39Prolyl-tRNA synthetase OS=Roseiflexus castenholzii... [more]
SYP_CHLT32.624e-2040.82Prolyl-tRNA synthetase OS=Chloroherpeton thalassiu... [more]
SYP_CHLL22.624e-2039.60Prolyl-tRNA synthetase OS=Chlorobium limicola (str... [more]
SYP_PROA23.412e-2040.59Prolyl-tRNA synthetase OS=Prosthecochloris aestuar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702350 ID=EY702350; Name=EY702350; organism=Citrus sinensis; type=EST; length=815bp
CCACGCGTCCGCAAAAAGCAGCACACGCTCGCCGCACCCCACGCAGTTAC
CACCGTTTGATTTAGTTTAGAAAATGGCTGGTGGTCAGGAGAAAAAGCCT
ATAGCTAAAGCAAAGCCTAAAGCTGATGCGGGCGGTGGAGGTAAGAAGAA
GGAGTTGAAGAAAGAAACTGGCTTAGGTCTCTCCTACAAGAAAGATGATA
ACTTTGGTGAATGGTATTCAGAGGTAGTTGTCAATGGTGAAATGATTGAA
TACTATGATATTTCTGGTTGTTATATCATGAGGCCTTGGGCAATTTCAAT
TTGGGAGACCATGCAGAAATTCTTTGATGCAGAAATCAAAAAAATGAAAA
TTCAGAATTGTTACTTTCCTCTCTTCGTATCCCCCACTGTTTTACAAAAG
GAGAAGGATCACATTGAGGGATTTGCTCCAGAGGTTGCGTGGGTGACAAA
ATCAGGCGAATCTGATTTAGAGGGTCCTATTGCAATTCGCCCACTAGTGA
AACTGTGATGTATCCCTACTTTTCGAAGGGAATAAGGGGGCATCCTGACT
TGCCATGAAACTTACCAGTGGTGCAATTGTGTCCTTGGGATTCACCATTC
CACCCCTTTATCAGGGGCGGGATTTTCCTGGGAGGAGGGGTACTGCTTTT
CACCCAGTCAAAACCAAAGGAGGGGCCCTCCAAATTTGAACCTCCCGGGC
TTTTTGAAAAATCCGGGTGGCCCGGTAAAGGGGCAAAAAGGGACCTTAAA
ATGTGCGGGGGGGTTTAACCACACTGGGGGGGGTTTTCCCAACACGGGGG
GGGGGTTAAGAGGGA
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