EY702308

Overview
NameEY702308
Unique NameEY702308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PHLP1_MOUSE (PH domain leucine-rich repeat-containing protein phosphatase 1 OS=Mus musculus GN=Phlpp1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 52/160 (32.50%), Postives = 73/160 (45.62%), Query Frame = 3
Query:  282 ANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDL 761
            AN G  + VLCR  + ++LS  +  + E+E  RI+    K I     +V GV   +R +G  +L P ++P P V  +    +DE  IL S GLWD ++ +EA E  R                       P A AAA+ L   A   G  D+IS  VV L
Sbjct: 1242 ANVGKCQTVLCRNGKPLSLSRSYIMSCEEERKRIKQH--KAIITEDGKVNGVTESTRILGYTFLHPSVVPRPHVQSVLLTPQDEFFILGSKGLWDSLSIDEAVEAVRN---------------------VPDALAAAKKLCTLAQSYGCHDSISAVVVQL 1378          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C48_ARATH (Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 63/216 (29.17%), Postives = 95/216 (43.98%), Query Frame = 3
Query:  228 TVGSTAVVAIICASHIIVANCGDSRAVLCRG----KESMALSVDHKPNREDEYARIEAA-------GGKVIQWNGHRVFGVLAMSRSIGDRYLK---------------------PWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSK----DNISVXVVDLKA 767
            +VG+  +V I+C   + VAN GDSR VL +     KE  A+ +  + N   E  R E            V++    RV G++ +SRSIGD YLK                     P +  EP +       ED+ LI ASDGLW+ ++N+EA ++          +NGV     +      A +    Y     +++G +    D+I+V VV L A
Sbjct:  150 SVGACCLVGIVCNGLLYVANAGDSRVVLGKVANPFKELKAVQLSTEHNASIESVREELRLLHPDDPNIVVLKHKVWRVKGIIQVSRSIGDAYLKRAEFNQEPLLPKFRVPERFEKPIMRAEPTITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNS-----CPRNGVARKLVKAALQEAAKKREMRYSDLEKIERGIRRHFHDDITVIVVFLHA 360          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: FEM2_CAEEL (Ca(2+)/calmodulin-dependent protein kinase phosphatase OS=Caenorhabditis elegans GN=fem-2 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 53/176 (30.11%), Postives = 82/176 (46.59%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANC--GDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGH-RVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXV 752
            GSTAV   I     ++A    GDS   +    E   L+  H P+ E E  R+E AGG++    G  RV GVL ++R++GD   +P I  EPE   +P    D  ++LA DG+ DV    +  +L                A      +   A+  + ++  +A++ GS DN+SV +
Sbjct:  261 GSTAVCCAIDMDQKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDEREARRVEEAGGQLFVIGGELRVNGVLNLTRALGDVPGRPMISNEPETCQVPIESSDYLVLLACDGISDVFNERDLYQLVE--------------AFANDYPVEDYAE-LSRFICTKAIEAGSADNVSVVI 421          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C38_ARATH (Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 59/214 (27.57%), Postives = 97/214 (45.33%), Query Frame = 3
Query:  228 TVGSTAVVAIICASHIIVANCGDSRAVLCRGKES------MALSVDHKPNREDEYARIEAAGGK-----VIQWNGHRVFGVLAMSRSIGDRYLK---------------------PWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSK----DNISVXVVDL 761
            +VG+  +V IIC+  + +AN GDSR VL R +++      + LS +H  + E     + +         V++    RV G++ +SRSIGD YLK                     P +  EP +       ED+ LI ASDGLW+ ++N+EA ++          +NG+     +      A +    Y   + + +G +    D+I+V VV L
Sbjct:  149 SVGACCLVGIICSGLLYIANAGDSRVVLGRLEKAFKIVKAVQLSSEHNASLESVREELRSLHPNDPQIVVLKHKVWRVKGIIQVSRSIGDAYLKKAEFNREPLLAKFRVPEVFHKPILRAEPAITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNT-----CPRNGIARKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFL 357          
The following BLAST results are available for this feature:
BLAST of EY702308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
PHLP1_MOUSE7.416e-1132.50PH domain leucine-rich repeat-containing protein p... [more]
P2C48_ARATH7.416e-1129.17Probable protein phosphatase 2C 48 OS=Arabidopsis ... [more]
FEM2_CAEEL7.416e-1130.11Ca(2+)/calmodulin-dependent protein kinase phospha... [more]
P2C38_ARATH9.685e-1127.57Probable protein phosphatase 2C 38 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-E07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702308 ID=EY702308; Name=EY702308; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCGGACGCGTGGGGGAGGCTTGCAGGTTGCAAACTACTGT
CGTGATCGCGTCCATACTGCTTTTGCTGAGGAGATAGAGCTTGTTAAGGA
ATGTCTGAGTGATGGAAGTGTGGTGCATAGCTGCCAAGAGCAATGGAAAA
AAATATTCACTAGTTGTTTTGCTAGAGTTGATGCTGAAGTTGGAGGAAAA
ACAAACCAAGAACCTGTTGCCCCAGAAACTGTTGGTTCTACTGCTGTTGT
TGCCATTATTTGTGCATCCCATATTATTGTAGCAAACTGTGGAGATTCAA
GAGCAGTTCTATGTCGTGGAAAAGAGTCCATGGCCTTGTCTGTGGATCAT
AAACCAAATCGAGAAGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAA
GGTTATACAATGGAATGGACATCGTGTATTTGGCGTTCTTGCGATGTCAA
GGTCTATTGGTGATAGATACTTGAAACCATGGATTATTCCTGAACCAGAA
GTAATGTTTCTTCCAAGGGCAAGAGAAGATGAATGCCTCATTCTAGCTAG
TGATGGTTTATGGGATGTCATGACAAATGAGGAGGCATGTGAGCTAGCAC
GGAAGCGAATACTACTCTGGCACAAAAAGAATGGCGTTACACTTGCCACT
GGAAGAGGGGAGGGAATCAATCCTGCTGCCCAGGCAGCTGCAGAGTACCT
CTCAAACCGTGCCCTCCAAAAGGGTAGCAAGGATAACATCAGTGTANTTG
TGGTGGATCTCAAGGCTCAAAGGAAGTTCAAGAGCAAACCTGACTGTTTC
TCATCCATCCTTTAGCTGTTATTTGATGGTGGATGATGAATATAATTACT
ATGATCTTAAATGGTTATGCCCCTCTGTTTTTCCCCGGGGTCTTATG
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