EY702308

Overview
NameEY702308
Unique NameEY702308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 7.639e-24
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELAR 602
            GSTAV AI+  + + VAN GDSRAV  +  +++ LS DHKPN++DE  RIE AGG V+  +  RV G+LA+SR+ G+R +K ++  EP +         E L+LA+DGLWDVM NE+A  L +
Sbjct:  215 GSTAVAAILIGNRLYVANVGDSRAVALKAGKAVPLSEDHKPNKKDERKRIEDAGGIVVSDDIWRVDGILAVSRAFGNRLMKRYVKAEPNIQEKVVDEGLEYLVLATDGLWDVMRNEDAVSLLK 337          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.903e-23
Identity = 81/253 (32.02%), Postives = 118/253 (46.64%), Query Frame = 3
Query:   27 GLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRARE-DECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            G QVA YC + +        +        GS      E  K    + F  +D  +   + ++  A  + GSTAV  +I   H    NCGDSR +LCR ++    + DHKP+   E  RI+ AGG V+     RV G LA+SR++GD   K           + PEPEV  + R+ E D+ +ILA DG+WDVM NEE C+  R R+                  +    +     + +  L KGS+DN+SV ++
Sbjct:   64 GSQVAKYCCEHLLDHITNNQDF------KGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRS-GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRL-----------------EVTDDLEKVCNEVVDTCLYKGSRDNMSVILI 289          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1A_RAT (Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.791e-23
Identity = 81/253 (32.02%), Postives = 118/253 (46.64%), Query Frame = 3
Query:   27 GLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRARE-DECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            G QVA YC + +        +        GS      E  K    + F  +D  +   + ++  A  + GSTAV  +I   H    NCGDSR +LCR ++    + DHKP+   E  RI+ AGG V+     RV G LA+SR++GD   K           + PEPEV  + R+ E D+ +ILA DG+WDVM NEE C+  R R+                  +    +     + +  L KGS+DN+SV ++
Sbjct:   64 GSQVAKYCCEHLLDHITNNQDF------KGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRS-GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRL-----------------EVTDDLEKVCNEVVDTCLYKGSRDNMSVILI 289          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.791e-23
Identity = 81/253 (32.02%), Postives = 118/253 (46.64%), Query Frame = 3
Query:   27 GLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRARE-DECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            G QVA YC + +        +        GS      E  K    + F  +D  +   + ++  A  + GSTAV  +I   H    NCGDSR +LCR ++    + DHKP+   E  RI+ AGG V+     RV G LA+SR++GD   K           + PEPEV  + R+ E D+ +ILA DG+WDVM NEE C+  R R+                  +    +     + +  L KGS+DN+SV ++
Sbjct:   64 GSQVAKYCCEHLLDHITNNQDF------KGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRS-GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRL-----------------EVTDDLEKVCNEVVDTCLYKGSRDNMSVILI 289          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.791e-23
Identity = 81/253 (32.02%), Postives = 118/253 (46.64%), Query Frame = 3
Query:   27 GLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRARE-DECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            G QVA YC + +        +        GS      E  K    + F  +D  +   + ++  A  + GSTAV  +I   H    NCGDSR +LCR ++    + DHKP+   E  RI+ AGG V+     RV G LA+SR++GD   K           + PEPEV  + R+ E D+ +ILA DG+WDVM NEE C+  R R+                  +    +     + +  L KGS+DN+SV ++
Sbjct:   64 GSQVAKYCCEHLLDHITNNQDF------KGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRS-GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRL-----------------EVTDDLEKVCNEVVDTCLYKGSRDNMSVILI 289          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.951e-23
Identity = 81/253 (32.02%), Postives = 118/253 (46.64%), Query Frame = 3
Query:   27 GLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRARE-DECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            G QVA YC + +        +        GS      E  K    + F  +D  +   + ++  A  + GSTAV  +I   H    NCGDSR +LCR ++    + DHKP+   E  RI+ AGG V+     RV G LA+SR++GD   K           + PEPEV  + R+ E D+ +ILA DG+WDVM NEE C+  R R+                  +    +     + +  L KGS+DN+SV ++
Sbjct:   64 GSQVAKYCCEHLLDHITNNQDF------RGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRS-GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRL-----------------EVTDDLEKVCNEVVDTCLYKGSRDNMSVILI 289          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.457e-22
Identity = 71/219 (32.42%), Postives = 108/219 (49.32%), Query Frame = 3
Query:   24 GGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSC---------QEQWKKIFT-----SCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGD------RYLKP---WIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRI 611
            GG +VA YC  R HT   E+++ +       ++   C           +W++        +C   + A +   T ++ V P   GSTA V II  + IIV N GDSR VL +  ++++LS DHKP+ E E  RI+ AGG V      R+ G+LA SR+IGD      R + P    +   P++       + E L++ASDG+WD M N    +  R+ +
Sbjct:   61 GGAEVAMYCAKRFHTMLLEDVDYINNL--PNAITSVCFRLDDDLQRSNEWRESLNPCANRNCLTNICANLHHFT-EDYVPPSYEGSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVFL---QRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQEL 273          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.209e-22
Identity = 74/180 (41.11%), Postives = 102/180 (56.67%), Query Frame = 3
Query:  234 GSTAVVAIICAS----HIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGH--RVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            GSTAV AI+ +S    +++VAN GDSRAV+ +   +  LSVDH+PN+E     IE  GG V    G   RV G LA++R+ GDR LK  +  EP+V+  P     + LILASDGLW VM+N+EA +  +                         AQAAA++L+ +A+ + SKD+IS  VV
Sbjct:  130 GSTAVTAILISSENSVNLVVANVGDSRAVISKSGVAKQLSVDHEPNKERH--SIEKKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSEPDVVEEPIDENTDFLILASDGLWKVMSNQEAVDEIKD---------------------FKDAQAAAKHLTEQAVNRKSKDDISCIVV 286          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C44_ORYSJ (Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.209e-22
Identity = 72/177 (40.68%), Postives = 97/177 (54.80%), Query Frame = 3
Query:  234 GSTAVVAIIC-ASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGH--RVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            GSTAV AI+     + VAN GDSRAV+C    +  L+VDH+P+  +E  RIE  GG V  + G   RV G LA++R+ GD+ LK  +  EP+V  +P     E +ILASDGLW VM N+EA +L +                          QAAA+ L+  AL + SKD+IS  V+
Sbjct:  162 GSTAVTAIVVDGKDMWVANVGDSRAVVCERGAANQLTVDHEPHTTNERQRIEKQGGFVTTFPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPINSSIEFVILASDGLWKVMKNQEAVDLVKS---------------------IKDPQAAAKRLTTEALARKSKDDISCIVI 317          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C50_ARATH (Putative protein phosphatase 2C 50 OS=Arabidopsis thaliana GN=At3g63320 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.150e-22
Identity = 79/233 (33.91%), Postives = 118/233 (50.64%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLC----------------------RGKESMA---------------------LSVDHKPNREDEYARIEAAGGKVIQWNG-HRVFGVLAMSRSIGD-RYLKPWIIPEPEVM-FLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGI-NPAAQAAAEYLSNRALQKGSKDNISVXVVDLKAQRKFKSKP 791
            GSTA +A+I    ++VA+ GDS+A+LC                      R ++S                       L+ DH P+REDE  R++AAGG V +W G  RV G LA+SRSIGD  Y    +I  PEVM + P    D  L+++SDG+++ +  ++AC+       LW  KN     T  G G+ +  + + A+ L N A +KGS DN++  VV LK+   ++S+P
Sbjct:  168 GSTATIALIADGQLLVASIGDSKALLCSERYETPEEAKATLIKLYRERKRNQDSSPSRFSDLKLEHRTGLMRFIAKELTKDHHPDREDEMLRVKAAGGYVTKWAGVPRVNGQLAVSRSIGDLTYRSYGVISAPEVMDWQPLVANDSYLVVSSDGIFEKLEVQDACD------RLWEVKN----QTSFGAGVPSYCSISLADCLVNTAFEKGSMDNMAAVVVPLKSNLDWESQP 390          
The following BLAST results are available for this feature:
BLAST of EY702308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
P2C55_ORYSJ7.639e-2447.97Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
PPM1A_BOVIN2.903e-2332.02Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]
PPM1A_RAT3.791e-2332.02Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm... [more]
PPM1A_RABIT3.791e-2332.02Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]
PPM1A_HUMAN3.791e-2332.02Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]
PPM1A_MOUSE4.951e-2332.02Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE... [more]
P2C21_ORYSJ2.457e-2232.42Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
P2C62_ORYSJ3.209e-2241.11Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C44_ORYSJ3.209e-2240.68Probable protein phosphatase 2C 44 OS=Oryza sativa... [more]
P2C50_ARATH7.150e-2233.91Putative protein phosphatase 2C 50 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-E07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702308 ID=EY702308; Name=EY702308; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCGGACGCGTGGGGGAGGCTTGCAGGTTGCAAACTACTGT
CGTGATCGCGTCCATACTGCTTTTGCTGAGGAGATAGAGCTTGTTAAGGA
ATGTCTGAGTGATGGAAGTGTGGTGCATAGCTGCCAAGAGCAATGGAAAA
AAATATTCACTAGTTGTTTTGCTAGAGTTGATGCTGAAGTTGGAGGAAAA
ACAAACCAAGAACCTGTTGCCCCAGAAACTGTTGGTTCTACTGCTGTTGT
TGCCATTATTTGTGCATCCCATATTATTGTAGCAAACTGTGGAGATTCAA
GAGCAGTTCTATGTCGTGGAAAAGAGTCCATGGCCTTGTCTGTGGATCAT
AAACCAAATCGAGAAGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAA
GGTTATACAATGGAATGGACATCGTGTATTTGGCGTTCTTGCGATGTCAA
GGTCTATTGGTGATAGATACTTGAAACCATGGATTATTCCTGAACCAGAA
GTAATGTTTCTTCCAAGGGCAAGAGAAGATGAATGCCTCATTCTAGCTAG
TGATGGTTTATGGGATGTCATGACAAATGAGGAGGCATGTGAGCTAGCAC
GGAAGCGAATACTACTCTGGCACAAAAAGAATGGCGTTACACTTGCCACT
GGAAGAGGGGAGGGAATCAATCCTGCTGCCCAGGCAGCTGCAGAGTACCT
CTCAAACCGTGCCCTCCAAAAGGGTAGCAAGGATAACATCAGTGTANTTG
TGGTGGATCTCAAGGCTCAAAGGAAGTTCAAGAGCAAACCTGACTGTTTC
TCATCCATCCTTTAGCTGTTATTTGATGGTGGATGATGAATATAATTACT
ATGATCTTAAATGGTTATGCCCCTCTGTTTTTCCCCGGGGTCTTATG
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