EY702308

Overview
NameEY702308
Unique NameEY702308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C74_ORYSJ (Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica GN=Os11g0242200 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.052e-21
Identity = 69/180 (38.33%), Postives = 101/180 (56.11%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKV-IQWNG-HRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRARED-ECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDLK 764
            G+ A  A++    + VAN GD RAV+ R   + AL+ DH P R+DE +RIE++GG V    NG  RV   LA++RS GD  LK W++ EPEV   P A    E L++ASDGLW+ ++N+EA +                +A G        +  +   L + A ++GS+D+++V VVDLK
Sbjct:  234 GACAATALVIDGDLYVANLGDCRAVISRHGAAAALTSDHTPARDDERSRIESSGGYVSCGSNGVWRVQDCLAVTRSFGDGGLKRWVVAEPEVSRTPLAGAGCEFLVIASDGLWNKVSNQEAVD---------------AVAAGH------YSVDSCRRLVDMARRRGSRDDVTVMVVDLK 392          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: ILKAP_HUMAN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.905e-21
Identity = 79/252 (31.35%), Postives = 128/252 (50.79%), Query Frame = 3
Query:   24 GGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAE-VGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKE------SMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGD-RYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            GG++ + +    +H        L+++    G V+ S ++  K+     F   D E +   ++Q+P   +  GSTA   +   + + +AN GDSRA+LCR  E      +++LS +H P + +E  RI+ AGG V      RV GVL +SRSIGD +Y +  +   P++        D  ++LA DGL+ V T EEA       IL   +   +    G+    +   +AA   L+N+A+Q+GS DN++V VV
Sbjct:  155 GGIRASKFAAQNLHQ------NLIRK-FPKGDVI-SVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKD--GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNV---RDGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNF----ILSCLEDEKIQTREGK-SAADARYEAACNRLANKAVQRGSADNVTVMVV 388          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.348e-20
Identity = 69/183 (37.70%), Postives = 99/183 (54.10%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVL-CRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGV---LAMSRSIGDRYLKPWIIPEPEVMFLPRAREDEC--LILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDLK 764
            G+ A  A++    + V+N GD RAVL  RG  + AL+ DH P REDE  RIE+ GG  +   G  V+ V   LA+SR+ GD  +K W+  EPE   +  A + +C  L+LASDGLW  ++N+EA +              V  A     G+  +     E L+  A  +GS+D+I+V VVDL+
Sbjct:  249 GACAATALVKDGELYVSNVGDCRAVLGSRGGVATALTSDHTPGREDERLRIESTGG-YVSCGGSGVWRVQDSLAVSRAFGDAGVKQWVTCEPETARVSLAADGDCRFLVLASDGLWCKVSNQEAVD-------------AVAAAAAAAAGVAGSTDPCKE-LAAMARSRGSRDDITVMVVDLQ 416          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.348e-20
Identity = 71/209 (33.97%), Postives = 111/209 (53.11%), Query Frame = 3
Query:  147 KKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKP------WIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            KK   S F + D E    ++ +  +    G+TA+ A I    +I+AN GD RAVL R   ++ LS DHKPN   E  RIE  GG V  ++G+ + G L+++R+IGD ++K        + PEPE+     + +DE LI+  DGLWDVM+++ A  +ARK ++                 I+   +  +  L   AL++ + DN++V VV
Sbjct:  158 KKAIKSAFLKADYEFADDSSLDISS----GTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVV--YDGY-LNGQLSVARAIGDWHMKGPKGSACPLSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQCAVTIARKELM-----------------IHNDPERCSRELVREALKRNTCDNLTVIVV 342          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.761e-20
Identity = 71/178 (39.89%), Postives = 101/178 (56.74%), Query Frame = 3
Query:  234 GSTAVVAIIC-ASHIIVANCGDSRAVLCRGKESMA-LSVDHKPNREDEYARIEAAGGKVIQWNGH--RVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            GSTAV AI+     I+VAN GDSRA+LCR  + +  ++VDH+P++E +   +++ GG V Q  G+  RV G LAM+R+ GD  LK  I   P +       + + LILASDGLW VM+N+E  +  +KR                       A+ AA+ L ++AL +GSKD+IS  VV
Sbjct:   78 GSTAVTAIVIDGKKIVVANVGDSRAILCRESDVVKQITVDHEPDKERDL--VKSKGGFVSQKPGNVPRVDGQLAMTRAFGDGGLKEHISVIPNIEIAEIHDDTKFLILASDGLWKVMSNDEVWDQIKKR---------------------GNAEEAAKMLIDKALARGSKDDISCVVV 232          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: ILKAP_BOVIN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Bos taurus GN=ILKAP PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.761e-20
Identity = 77/252 (30.56%), Postives = 127/252 (50.40%), Query Frame = 3
Query:   24 GGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAE-VGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKE------SMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGD-RYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            GG++ + +    +H        L+++      +  S ++  K+     F   D E +   ++Q+P   +  GSTA   +   + + +AN GDSRA+LCR  E      +++LS +H P + +E  RI+ AGG V      RV GVL +SRSIGD +Y +  +   P++        D  ++LA DGL+ V T EEA       IL   +   +    G+   ++   +AA   L+N+A+Q+GS DN++V VV
Sbjct:  133 GGIRASKFAAQNLHQ------NLIRKFPKGDGI--SVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKD--GSTATCVLAVDNTLYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNV---RDGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNF----ILSCLEDEKIQRREGK-PTVDARYEAACNRLANKAVQRGSADNVTVMVV 366          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.004e-20
Identity = 61/191 (31.94%), Postives = 102/191 (53.40%), Query Frame = 3
Query:  210 EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPW---------IIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            E +   + G+TA+ A++   H++VAN GD RAVLCR  +++ +S DHK   E E  R+E  GG    + G  ++G LA++R++GD  +K +         +I +P++  +    EDE LI+  DG+WDVMT++ A    R+ +    +++G               +  A  L   AL+  S DN++V V+
Sbjct:  221 ERIVSSSCGTTALTALVIGRHLMVANVGDCRAVLCRKGKAVDMSFDHKSTFEPERRRVEDLGG---YFEGEYLYGDLAVTRALGDWSIKRFSPLGESLSPLISDPDIQQMILTEEDEFLIMGCDGVWDVMTSQYAVTFVRQGL----RRHG-------------DPRRCAMELGREALRLDSSDNVTVVVI 391          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.004e-20
Identity = 71/180 (39.44%), Postives = 100/180 (55.56%), Query Frame = 3
Query:  234 GSTAVVAIIC-ASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGH--RVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDLK 764
            GSTAV AI+     + VAN GDSRAVL +G +++ +++DH+P+ E     IE  GG V    G   RV G LA+SR+ GD+ LK  +  +P+V         + L+LASDGLW VM N+EA ++AR+                    I    +AA E L+  AL++ SKD+IS  VV L+
Sbjct:  126 GSTAVTAILMNGRRLWVANVGDSRAVLSQGGQAIQMTIDHEPHTER--LSIEGKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKTHLRSDPDVKDSSIDDHTDVLVLASDGLWKVMANQEAIDIARR--------------------IKDPLKAAKE-LTTEALRRDSKDDISCIVVRLR 282          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1F_MOUSE (Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.124e-20
Identity = 80/247 (32.39%), Postives = 113/247 (45.75%), Query Frame = 3
Query:   24 GGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDLK 764
            GG+  A Y    VHT  + + EL              +          F   D     K  +E +     G+T V A+I  + + VA  GDS+ +L +    + L   HKP R+DE ARIEA GG V   +  RV G LA+SR+IGD + KP++  E +         ++ L+LA DG +DV+ + E   L     LL HK NG+ +               AE L   A  +GS DNI+V VV L+
Sbjct:  198 GGVDAARYASVHVHTNASHQPEL--------------RTNPAAALKEAFRLTDEMFLQKAKRERLQS---GTTGVCALIAGAALHVAWLGDSQVILVQQGRVVKLMEPHKPERQDEKARIEALGGFVSLMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRELTGSEDYLLLACDGFFDVVPHHEVTGLVHGH-LLRHKGNGMRI---------------AEELVAVARDRGSHDNITVMVVFLR 411          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.124e-20
Identity = 72/177 (40.68%), Postives = 94/177 (53.11%), Query Frame = 3
Query:  234 GSTAVVAIICASHII-VANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGH--RVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            GSTAV AI+     + VAN GDSRAVL +G   + +S DH PN   E + IE  GG V    G   RV G LA+SR+ GDR LK  +  EP++         E L+LASDGLW VM N+E  ++A++                         QAAA+ L+  AL++ SKD+IS  VV
Sbjct:  127 GSTAVTAILLNGRKLWVANVGDSRAVLLKGGRPIQMSTDHDPN--VERSAIENRGGFVSNMPGDVPRVCGQLAVSRAFGDRNLKSLLKSEPDIKVEDIDYTAELLVLASDGLWKVMNNQEVVDVAKR---------------------FKDPQAAAKQLTAEALKRDSKDDISCVVV 280          
The following BLAST results are available for this feature:
BLAST of EY702308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
P2C74_ORYSJ6.052e-2138.33Probable protein phosphatase 2C 74 OS=Oryza sativa... [more]
ILKAP_HUMAN7.905e-2131.35Integrin-linked kinase-associated serine/threonine... [more]
P2C77_ORYSJ1.348e-2037.70Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
P2C27_ARATH1.348e-2033.97Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C28_ARATH1.761e-2039.89Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]
ILKAP_BOVIN1.761e-2030.56Integrin-linked kinase-associated serine/threonine... [more]
P2C43_ARATH3.004e-2031.94Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
P2C10_ARATH3.004e-2039.44Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]
PPM1F_MOUSE5.124e-2032.39Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE... [more]
P2C41_ORYSJ5.124e-2040.68Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-E07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702308 ID=EY702308; Name=EY702308; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCGGACGCGTGGGGGAGGCTTGCAGGTTGCAAACTACTGT
CGTGATCGCGTCCATACTGCTTTTGCTGAGGAGATAGAGCTTGTTAAGGA
ATGTCTGAGTGATGGAAGTGTGGTGCATAGCTGCCAAGAGCAATGGAAAA
AAATATTCACTAGTTGTTTTGCTAGAGTTGATGCTGAAGTTGGAGGAAAA
ACAAACCAAGAACCTGTTGCCCCAGAAACTGTTGGTTCTACTGCTGTTGT
TGCCATTATTTGTGCATCCCATATTATTGTAGCAAACTGTGGAGATTCAA
GAGCAGTTCTATGTCGTGGAAAAGAGTCCATGGCCTTGTCTGTGGATCAT
AAACCAAATCGAGAAGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAA
GGTTATACAATGGAATGGACATCGTGTATTTGGCGTTCTTGCGATGTCAA
GGTCTATTGGTGATAGATACTTGAAACCATGGATTATTCCTGAACCAGAA
GTAATGTTTCTTCCAAGGGCAAGAGAAGATGAATGCCTCATTCTAGCTAG
TGATGGTTTATGGGATGTCATGACAAATGAGGAGGCATGTGAGCTAGCAC
GGAAGCGAATACTACTCTGGCACAAAAAGAATGGCGTTACACTTGCCACT
GGAAGAGGGGAGGGAATCAATCCTGCTGCCCAGGCAGCTGCAGAGTACCT
CTCAAACCGTGCCCTCCAAAAGGGTAGCAAGGATAACATCAGTGTANTTG
TGGTGGATCTCAAGGCTCAAAGGAAGTTCAAGAGCAAACCTGACTGTTTC
TCATCCATCCTTTAGCTGTTATTTGATGGTGGATGATGAATATAATTACT
ATGATCTTAAATGGTTATGCCCCTCTGTTTTTCCCCGGGGTCTTATG
back to top