EY702308

Overview
NameEY702308
Unique NameEY702308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.663e-19
Identity = 69/198 (34.85%), Postives = 104/198 (52.53%), Query Frame = 3
Query:  228 TVGSTAVVAIICAS-HIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNG---HRVFGVLAMSRSIGDRYLK-PWIIPEPEVMFLP-RAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDLKAQRKFKSKPDCFS 803
            T G+TA VA++     ++VA+ GDSRA+LCR  + M L++DH P R+DE  RI+  GG  + WN      V G LAM+RSIGD  LK   +I EPE   +     +D  L+L +DG+  ++ ++E C+   +     H  N                  AA  ++ +A+Q G++DN +  VV   A  K+K+    FS
Sbjct:  185 TSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ----CHDPN-----------------EAAHAVTEQAIQYGTEDNSTAVVVPFGAWGKYKNSEINFS 360          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1F_RAT (Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.663e-19
Identity = 78/247 (31.58%), Postives = 116/247 (46.96%), Query Frame = 3
Query:   24 GGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDLK 764
            GG+  A Y    VHT  + + EL    L+D +                F   D     K  +E +     G+T V A+I  + + VA  GDS+ +L +  + + L   HKP R+DE +RIEA GG V   +  RV G LA+SR+IGD + KP++  E +         ++ L+LA DG +DV+ + E   L    +L             +G G++      AE L   A  +GS DNI+V VV L+
Sbjct:  197 GGVDAARYASVHVHTNASHQPEL----LTDPAAA----------LKEAFRHTDQMFLQKAKRERLQS---GTTGVCALITGAALHVAWLGDSQVILVQQGQVVKLMEPHKPERQDEKSRIEALGGFVSLMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRELTGLEDYLLLACDGFFDVVPHHEIPGLVHGHLL-----------RQKGSGMH-----VAEELVAVARDRGSHDNITVMVVFLR 410          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C04_ORYSJ (Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.663e-19
Identity = 66/179 (36.87%), Postives = 97/179 (54.19%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVI-QWNGHRV-FGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDLK 764
            G TAV A+I  + + VAN GD RA+L R  E   ++ DH  +   E  RI   G +V  Q +  RV    L ++RSIGD  LKP +  +PEV+    + +DE L++ASDGLWDVM+NE+   + +  +    K+ G+                 ++ L+  A  +GSKDNI+V VV L+
Sbjct:  490 GCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDLKPAVTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDVLSIIKDTV----KEPGM----------------CSKRLATEAAARGSKDNITVIVVFLR 648          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PP2C1_SCHPO (Protein phosphatase 2C homolog 1 OS=Schizosaccharomyces pombe GN=ptc1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.262e-18
Identity = 73/255 (28.63%), Postives = 118/255 (46.27%), Query Frame = 3
Query:   27 GLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASH------IIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAR----EDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDL 761
            G+Q ++YC+  +H    E++    + L               +    F  V++++   T+ +       G TA VA            +  AN GD+R VLCR  +++ LS DHK +  +E  R+   GG ++Q   +R+ GVLA++R++GD YLK  +   P   F    R     DE  I+A DGLWDV++++EA +  R  +                     + + AA  L   AL++ S DNI+  VV+L
Sbjct:  113 GIQASDYCQKNLHKVLLEKVRNEPDRLVTD------------LMDETFVEVNSKIAKATHND-----ICGCTAAVAFFRYEKNRTRRVLYTANAGDARIVLCRDGKAIRLSYDHKGSDANESRRVTQLGGLMVQ---NRINGVLAVTRALGDTYLKELVSAHP---FTTETRIWNGHDEFFIIACDGLWDVVSDQEAVDFVRNFV---------------------SPREAAVRLVEFALKRLSTDNITCIVVNL 323          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.262e-18
Identity = 68/253 (26.88%), Postives = 120/253 (47.43%), Query Frame = 3
Query:   24 GGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPW---------IIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            GG   A+Y RD +     E+ +   E               +K+    F + D++   + + +       G+TA+ A+I    ++VAN GD RAVL R   ++ +S DH+    +E  RIE+ GG V   +   + G LA++R++GD +L+           +  EPE+  +   +EDE LI+ SDG+WD  +N+ A +  RKR+    + N + L                + +   A+++G+ DN++  +V
Sbjct:  101 GGKDAAHYVRDNLPRVIVEDADFPLEL--------------EKVVRRSFVQTDSQFAERCSHQNALSS--GTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYV---DDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQNAVDFTRKRL---QEHNDLRL--------------CCKQIVEEAIRRGASDNLTAVMV 317          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.153e-18
Identity = 67/253 (26.48%), Postives = 119/253 (47.04%), Query Frame = 3
Query:   24 GGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPW---------IIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            GG   A++ RD +     E+ +   E               +K+    F   D       NQ      + G+TA+ A+I    +++AN GD RAVL R   ++ +SVDH+P    E  R+E+ GG V   +   + G+L ++R++GD +L+           +  EPE+  +   ++DE LI+ SDG+WDV +N+   + AR+R+    + N V              ++    +   A+++G+ DN++  +V
Sbjct:  112 GGKDAAHFVRDNLPRIIVEDADFPLEL--------------EKVVRRSFVHAD-------NQFAKTTLSSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYV---DDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNVVDFARRRL---QEHNDV--------------KSCCREIVEEAIKRGATDNLTAVLV 323          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 93.2041 bits (230), Expect = 2.153e-18
Identity = 88/278 (31.65%), Postives = 120/278 (43.17%), Query Frame = 3
Query:   24 GGLQVANYCRDRVHTAFAEEIEL--------------VKECLSDGSVVH------SCQEQWKKIFTSCFARVDAEVGGKTNQEPV--APETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNG-HRVFGVLAMSRSIGDRYLKPWIIPEPEVMFL---PRARED------ECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKG--SKDNISVXVV 755
            GG  VA YC + +H    E+ +               + E L + +         S  E W+    S        +G      PV   P   G TA V +I  + I+V N GD+R V+ R  +++ALS DHKPN  +E  RI AAGG V    G HRV   +A+SR+IGD   K      PE   L   P  R D      E L++A DG+WDV+ N+   +  R      H  NGV L+               E L   A+ +   S DN+SV +V
Sbjct:   65 GGSAVARYCANHLHNKVLEQEDFSSNLANALRQSFFRMDEMLRNQAASKELTEYGSGNEYWRTAGRSWLRCAPCVLG------PVYCGPLAEGCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDLSYKNNKKLRPEQQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFVR-----LHLNNGVELS------------VICESLLQEAITRDPPSTDNMSVILV 319          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C12_ORYSJ (Probable protein phosphatase 2C 12 OS=Oryza sativa subsp. japonica GN=Os02g0224100 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.153e-18
Identity = 66/177 (37.29%), Postives = 95/177 (53.67%), Query Frame = 3
Query:  138 EQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKES-----MALSVDHKPNREDEYARIEAAGGKVIQ----------WNGHRVFGVLAMSRSIGDRYLKPW-IIPEPEVMFLPRAREDECLILASDGLWDVMTNEE----ACELARKR 608
            E+W++   S FA +D E+  + N +       G+TAV AI     +I+AN GDSRAVL    ++     + L+VDHKP+  +E ARI+ +GG+V            W        LAM+RS+GD  LK   +IP PEV        D  ++LA+DG+WDV++NEE     C   RK+
Sbjct:  150 EEWRQACASAFAAMDGELKLQPNLDCAFS---GTTAVCAIKQGRDLIIANLGDSRAVLATMSDTGYLQAVQLTVDHKPSVPEEAARIKRSGGRVFGLKDEPGVMRVWLPGENSPGLAMARSLGDMRLKRHGVIPAPEVTSRRVTGADLFMVLATDGVWDVLSNEEVVSIVCATPRKQ 323          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.811e-18
Identity = 60/200 (30.00%), Postives = 99/200 (49.50%), Query Frame = 3
Query:   24 GGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK------PWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARK 605
            GGL  A Y +        E+ E  +    D + V S +   ++ F      +  ++            + G+TA+ A++    ++VAN GD RAVLCR   +M +S DH+ N  +E  R+ A+GG +       + GVL+++R++GD  +K        +I EPE        +DE LI+  DG+WDVMT++ A  + R+
Sbjct:  123 GGLDAAAYMKRHAMRFLFEDSEFPQASQVDETYVQSVENSVRRAFLQADLALADDLD--------ISRSSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERVAASGGYI---EDGYLNGVLSVTRALGDWDMKMPDGSISPLIAEPEFRQTMLTEDDEFLIMGCDGIWDVMTSQHAVSIVRR 311          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.672e-18
Identity = 68/186 (36.56%), Postives = 91/186 (48.92%), Query Frame = 3
Query:  225 ETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVV 755
            ET G TAVV ++    + +A+CGDSRAVL R       + DH+P R  E  RI AAGG +      RV G LA+SR++GD   K           +  EPEV  L R  EDE ++LASDG+WD ++      L   R+ L               G+ P    A   L +  L KGS DN++  +V
Sbjct:  159 ETGGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTI---RRRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRLRL---------------GLAPELLCA--QLLDTCLCKGSLDNMTCILV 324          
The following BLAST results are available for this feature:
BLAST of EY702308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
PPM1K_HUMAN9.663e-1934.85Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]
PPM1F_RAT9.663e-1931.58Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm... [more]
P2C04_ORYSJ9.663e-1936.87Protein kinase and PP2C-like domain-containing pro... [more]
PP2C1_SCHPO1.262e-1828.63Protein phosphatase 2C homolog 1 OS=Schizosaccharo... [more]
P2C27_ORYSJ1.262e-1826.88Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C54_ORYSJ2.153e-1826.48Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
P2C42_ORYSJ2.153e-1831.65Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]
P2C12_ORYSJ2.153e-1837.29Probable protein phosphatase 2C 12 OS=Oryza sativa... [more]
P2C47_ORYSJ2.811e-1830.00Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
PPMBL_HUMAN3.672e-1836.56Probable protein phosphatase 1B-like OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-E07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702308 ID=EY702308; Name=EY702308; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCGGACGCGTGGGGGAGGCTTGCAGGTTGCAAACTACTGT
CGTGATCGCGTCCATACTGCTTTTGCTGAGGAGATAGAGCTTGTTAAGGA
ATGTCTGAGTGATGGAAGTGTGGTGCATAGCTGCCAAGAGCAATGGAAAA
AAATATTCACTAGTTGTTTTGCTAGAGTTGATGCTGAAGTTGGAGGAAAA
ACAAACCAAGAACCTGTTGCCCCAGAAACTGTTGGTTCTACTGCTGTTGT
TGCCATTATTTGTGCATCCCATATTATTGTAGCAAACTGTGGAGATTCAA
GAGCAGTTCTATGTCGTGGAAAAGAGTCCATGGCCTTGTCTGTGGATCAT
AAACCAAATCGAGAAGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAA
GGTTATACAATGGAATGGACATCGTGTATTTGGCGTTCTTGCGATGTCAA
GGTCTATTGGTGATAGATACTTGAAACCATGGATTATTCCTGAACCAGAA
GTAATGTTTCTTCCAAGGGCAAGAGAAGATGAATGCCTCATTCTAGCTAG
TGATGGTTTATGGGATGTCATGACAAATGAGGAGGCATGTGAGCTAGCAC
GGAAGCGAATACTACTCTGGCACAAAAAGAATGGCGTTACACTTGCCACT
GGAAGAGGGGAGGGAATCAATCCTGCTGCCCAGGCAGCTGCAGAGTACCT
CTCAAACCGTGCCCTCCAAAAGGGTAGCAAGGATAACATCAGTGTANTTG
TGGTGGATCTCAAGGCTCAAAGGAAGTTCAAGAGCAAACCTGACTGTTTC
TCATCCATCCTTTAGCTGTTATTTGATGGTGGATGATGAATATAATTACT
ATGATCTTAAATGGTTATGCCCCTCTGTTTTTCCCCGGGGTCTTATG
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