EY702308

Overview
NameEY702308
Unique NameEY702308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.796e-18
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRI 611
            G+TAVVA+I    +IVAN GDSR V+    +++ +S DHKP  E E ARI+ AGGKV      RV G L +SR+IGD + K           I   P++  L    + E +++A DG+W+VM+++E  +  + +I
Sbjct:  325 GTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM--DGRVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKI 457          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.796e-18
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRI 611
            G+TAVVA+I    +IVAN GDSR V+    +++ +S DHKP  E E ARI+ AGGKV      RV G L +SR+IGD + K           I   P++  L    + E +++A DG+W+VM+++E  +  + +I
Sbjct:  329 GTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM--DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKI 461          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.796e-18
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRI 611
            G+TAVVA+I    +IVAN GDSR V+    +++ +S DHKP  E E ARI+ AGGKV      RV G L +SR+IGD + K           I   P++  L    + E +++A DG+W+VM+++E  +  + +I
Sbjct:  328 GTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM--DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKI 460          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.796e-18
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRI 611
            G+TAVVA+I    +IVAN GDSR V+    +++ +S DHKP  E E ARI+ AGGKV      RV G L +SR+IGD + K           I   P++  L    + E +++A DG+W+VM+++E  +  + +I
Sbjct:  326 GTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM--DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVIDFIQSKI 458          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C41_ARATH (Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.796e-18
Identity = 63/183 (34.43%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  105 LSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLC------RGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHR-VFGV---------LAMSRSIGDRYLKPW-IIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELAR 602
            LS      S  + WK+     F+ +D ++    + +       G TA+ A++   H+++AN GDSRAV+        G   + LSVD KPN  +E  RI+ + G++   +    V+ V         LA+SR+ GD  LK + ++ EPEV +     +D+ LILA+DG+WDVMTN EA E+ R
Sbjct:  130 LSSSPECSSPFDLWKQACLKTFSIIDLDLKISPSIDSYCS---GCTALTAVLQGDHLVIANAGDSRAVIATTSDDGNGLVPVQLSVDFKPNIPEEAERIKQSDGRLFCLDDEPGVYRVGMPNGGSLGLAVSRAFGDYCLKDFGLVSEPEVTYRKITDKDQFLILATDGMWDVMTNNEAVEIVR 309          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.263e-18
Identity = 56/137 (40.88%), Postives = 78/137 (56.93%), Query Frame = 3
Query:  228 TVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK---------PWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRI 611
            T GSTA VAII    +IVAN GDSR VL R   +  LS DHKP+ + E  RI  AGG ++     RV G L ++R+IGD  LK           +  EPE+  +  + +DE ++LA DG+WD M+++E  +   K +
Sbjct:  157 TSGSTACVAIIRNDELIVANAGDSRCVLSRKGRAYDLSKDHKPDLDAEKERILNAGGFIV---AGRVNGSLNLARAIGDMELKQNEFLPAERQIVTAEPELNTVKLSEDDEFIVLACDGIWDCMSSQEVVDFVHKEM 290          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1E_RAT (Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm1e PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.180e-18
Identity = 64/181 (35.36%), Postives = 93/181 (51.38%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDLKAQRK 776
            G+T VV  I  + + VA  GDS+ +L R  +++ L   HKP+REDE  RIEA GG V+ +   RV G L++SR+IGD   KP+I  + +         ++ LILA DG +D +  +EA ++    +    K+N            N  +   A  L   A   GS DNI+V VV L+   K
Sbjct:  326 GTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHL----KEN------------NGDSSMVAHKLVASARDAGSSDNITVIVVFLRDMNK 490          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1E_MOUSE (Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.180e-18
Identity = 64/181 (35.36%), Postives = 93/181 (51.38%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDLKAQRK 776
            G+T VV  I  + + VA  GDS+ +L R  +++ L   HKP+REDE  RIEA GG V+ +   RV G L++SR+IGD   KP+I  + +         ++ LILA DG +D +  +EA ++    +    K+N            N  +   A  L   A   GS DNI+V VV L+   K
Sbjct:  326 GTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHL----KEN------------NGDSSMVAHKLVASARDAGSSDNITVIVVFLRDMNK 490          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.180e-18
Identity = 61/200 (30.50%), Postives = 97/200 (48.50%), Query Frame = 3
Query:   24 GGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLK------PWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARK 605
            GG   A Y +      F E+ E  +    D S   S ++     F S    +  ++            + G+TA+ A+I    ++VAN GD RAVLCR   ++ +S DH+P  + E+ RI   GG +       + GVL+++R++GD  +K        +I EPE        +DE LI+  DG+WDVM+++ A  + RK
Sbjct:  116 GGPDAAAYMKRHAIRLFFEDSEFPQALEEDESFYESVEKSIHNAFLSADLALADDLA--------ISRSSGTTALAALIFGRQLLVANAGDCRAVLCRKGVAVEMSRDHRPTYDAEHERITECGGYI---EDGYLNGVLSVTRALGDWDMKMPQGSRSPLIAEPEFQQTTLTEDDEFLIIGCDGIWDVMSSQHAVTIVRK 304          
BLAST of EY702308 vs. ExPASy Swiss-Prot
Match: PPM1E_HUMAN (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.068e-17
Identity = 63/181 (34.81%), Postives = 93/181 (51.38%), Query Frame = 3
Query:  234 GSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAREDECLILASDGLWDVMTNEEACELARKRILLWHKKNGVTLATGRGEGINPAAQAAAEYLSNRALQKGSKDNISVXVVDLKAQRK 776
            G+T VV  I  + + VA  GDS+ +L R  +++ L   HKP+REDE  RIEA GG ++ +   RV G L++SR+IGD   KP+I  + +         ++ LILA DG +D +  +EA ++    +    K+N            N  +   A  L   A   GS DNI+V VV L+   K
Sbjct:  340 GTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCIVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHL----KEN------------NGDSSMVAHKLVASARDAGSSDNITVIVVFLRDMNK 504          
The following BLAST results are available for this feature:
BLAST of EY702308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
PPM1G_MOUSE4.796e-1839.26Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]
PPM1G_MACFA4.796e-1839.26Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_HUMAN4.796e-1839.26Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
PPM1G_BOVIN4.796e-1839.26Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
P2C41_ARATH4.796e-1834.43Probable protein phosphatase 2C 41 OS=Arabidopsis ... [more]
P2C70_ORYSJ6.263e-1840.88Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
PPM1E_RAT8.180e-1835.36Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm... [more]
PPM1E_MOUSE8.180e-1835.36Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE... [more]
P2C02_ORYSJ8.180e-1830.50Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
PPM1E_HUMAN1.068e-1734.81Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-E07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702308 ID=EY702308; Name=EY702308; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCGGACGCGTGGGGGAGGCTTGCAGGTTGCAAACTACTGT
CGTGATCGCGTCCATACTGCTTTTGCTGAGGAGATAGAGCTTGTTAAGGA
ATGTCTGAGTGATGGAAGTGTGGTGCATAGCTGCCAAGAGCAATGGAAAA
AAATATTCACTAGTTGTTTTGCTAGAGTTGATGCTGAAGTTGGAGGAAAA
ACAAACCAAGAACCTGTTGCCCCAGAAACTGTTGGTTCTACTGCTGTTGT
TGCCATTATTTGTGCATCCCATATTATTGTAGCAAACTGTGGAGATTCAA
GAGCAGTTCTATGTCGTGGAAAAGAGTCCATGGCCTTGTCTGTGGATCAT
AAACCAAATCGAGAAGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAA
GGTTATACAATGGAATGGACATCGTGTATTTGGCGTTCTTGCGATGTCAA
GGTCTATTGGTGATAGATACTTGAAACCATGGATTATTCCTGAACCAGAA
GTAATGTTTCTTCCAAGGGCAAGAGAAGATGAATGCCTCATTCTAGCTAG
TGATGGTTTATGGGATGTCATGACAAATGAGGAGGCATGTGAGCTAGCAC
GGAAGCGAATACTACTCTGGCACAAAAAGAATGGCGTTACACTTGCCACT
GGAAGAGGGGAGGGAATCAATCCTGCTGCCCAGGCAGCTGCAGAGTACCT
CTCAAACCGTGCCCTCCAAAAGGGTAGCAAGGATAACATCAGTGTANTTG
TGGTGGATCTCAAGGCTCAAAGGAAGTTCAAGAGCAAACCTGACTGTTTC
TCATCCATCCTTTAGCTGTTATTTGATGGTGGATGATGAATATAATTACT
ATGATCTTAAATGGTTATGCCCCTCTGTTTTTCCCCGGGGTCTTATG
back to top