CX077624

Overview
NameCX077624
Unique NameCX077624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077624 vs. ExPASy Swiss-Prot
Match: RL7_YARLI (60S ribosomal protein L7 OS=Yarrowia lipolytica GN=RPL7 PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.846e-59
Identity = 106/162 (65.43%), Postives = 137/162 (84.57%), Query Frame = 1
Query:  184 KLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLW 669
            K+I++R ++Y KEY E ++E IRL+REAKL G FYV  E KL+F+IRI+GI+ + PK +K+LQLLRL QI NGVF+++ KAT  +L  VEPY+ +GYPNL SVR+L+YKRGYGK+NKQRI L+DN+IIE+ALG++GIICMEDLIHEI TVGP FK+A+NFLW
Sbjct:   48 KVIFSRAEKYVKEYREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTVGPAFKQASNFLW 209          
BLAST of CX077624 vs. ExPASy Swiss-Prot
Match: RL7_CHICK (60S ribosomal protein L7 OS=Gallus gallus GN=RPL7 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.949e-58
Identity = 107/163 (65.64%), Postives = 130/163 (79.75%), Query Frame = 1
Query:  181 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLW 669
            RK+IY R K Y KEY    ++ IR+ R A+  G +YV  E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV +LIYKRGYGK+NK+RIALTDNS+I + LG+ GIICMED+IHEI TVG +FK  NNFLW
Sbjct:   45 RKIIYERAKAYHKEYRHMYRQEIRMARMARKAGNYYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVHDLIYKRGYGKINKKRIALTDNSLIRKRLGKLGIICMEDVIHEIYTVGKNFKVVNNFLW 207          
BLAST of CX077624 vs. ExPASy Swiss-Prot
Match: RL7_ASHGO (60S ribosomal protein L7 OS=Ashbya gossypii GN=RPL7 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.141e-54
Identity = 98/163 (60.12%), Postives = 129/163 (79.14%), Query Frame = 1
Query:  181 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLW 669
            R  I  R   Y KEY+  ++ +I+ KREAK  G +YV  + KL+F+IRI+GIN + PK +K+LQLLRL QI +GVF+KV KAT  +L  VEPYV YGYP+  ++R+L+YKRGYGK+NKQRIAL++NSI+E  LG++GII ++DLIHEI+TVGPHFK+ANNFLW
Sbjct:   40 RAAILERNAAYHKEYETAERAVIQAKREAKANGSYYVESQPKLVFVIRIKGINKIAPKPRKVLQLLRLNQINSGVFVKVTKATTELLRLVEPYVAYGYPSYSTIRQLVYKRGYGKINKQRIALSENSIVEANLGKYGIISVDDLIHEIITVGPHFKQANNFLW 202          
BLAST of CX077624 vs. ExPASy Swiss-Prot
Match: RL7C_SCHPO (60S ribosomal protein L7-C OS=Schizosaccharomyces pombe GN=rpl7c PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.946e-54
Identity = 108/191 (56.54%), Postives = 136/191 (71.20%), Query Frame = 1
Query:   97 LKKKKRXXXXXXXXXXXXXXXXXXXXXTRKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLW 669
            LKKKK                       R+LI  R + Y  EY + ++E I L R+A+ +G +YV  E KL+F+IRIRGIN + PK +KI+QLLRL QI NGVF+K NKAT  ML  VEPYVTYG PNLK+VREL+YKRG+GK+NKQRIAL+DN+IIE ALG++ I+ +EDLIHEI TVGP+FK+A NF+W
Sbjct:   21 LKKKKTQEQSREQRVAAAAEKKAAQQKKRELIAKRAESYDAEYRKAEREQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEIYTVGPNFKQAANFIW 211          
BLAST of CX077624 vs. ExPASy Swiss-Prot
Match: RL7_DEBHA (60S ribosomal protein L7 OS=Debaryomyces hansenii GN=RPL7 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.261e-53
Identity = 94/163 (57.67%), Postives = 131/163 (80.37%), Query Frame = 1
Query:  181 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLW 669
            RK+I++R   Y KEY + ++ +I+ KR+AK  G +YV+ + KL+F++RI+GIN + PK +K+LQLLRL QI  GVF+++ KAT  +L   EPY+ YGYPNL ++R L+YKRG+GK+NKQRIAL+DN+IIE  LG++GI+ +EDLIHEI TVGP+FK+ANNFLW
Sbjct:   39 RKIIFDRAAAYQKEYTDAERAVIKAKRDAKAAGSYYVDAQPKLVFVVRIKGINKIAPKPRKVLQLLRLTQINAGVFVRLTKATSELLKLAEPYIAYGYPNLSTIRHLVYKRGHGKINKQRIALSDNAIIEANLGKYGILSIEDLIHEIYTVGPNFKQANNFLW 201          
BLAST of CX077624 vs. ExPASy Swiss-Prot
Match: RL7_CAEEL (60S ribosomal protein L7 OS=Caenorhabditis elegans GN=rpl-7 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.648e-53
Identity = 96/159 (60.38%), Postives = 126/159 (79.25%), Query Frame = 1
Query:  193 YNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLW 669
            + R ++Y +EY   QKE +RLKREA+ KG FYV  E K+ F++RIRGIN + PK +K LQ+LRLRQI NGVF+K+NKATL +L  +EPYV +GYPN K++ +L+YKRGY K++  R+ +TDN+I+EQ+LG+  IIC+EDL HEI TVGPHFKEA NFLW
Sbjct:   47 FKRAEKYVQEYRNAQKEGLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFKEATNFLW 205          
BLAST of CX077624 vs. ExPASy Swiss-Prot
Match: RL7B_YEAST (60S ribosomal protein L7-B OS=Saccharomyces cerevisiae GN=RPL7B PE=1 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 6.261e-53
Identity = 91/163 (55.83%), Postives = 129/163 (79.14%), Query Frame = 1
Query:  181 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLW 669
            R +I  R   Y KEY+  ++ +I+ KR+AK  G +YV  + KL+F++RI+GIN + PK +K+LQLLRL +I +G F+KV KATL +L  +EPYV YGYP+  ++R+L+YKRG+GK+NKQR+ L+DN+IIE  LG++GI+ ++DLIHEI+TVGPHFK+ANNFLW
Sbjct:   41 RAIILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLW 203          
BLAST of CX077624 vs. ExPASy Swiss-Prot
Match: RL7A_YEAST (60S ribosomal protein L7-A OS=Saccharomyces cerevisiae GN=RPL7A PE=1 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 6.261e-53
Identity = 91/163 (55.83%), Postives = 129/163 (79.14%), Query Frame = 1
Query:  181 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLW 669
            R +I  R   Y KEY+  ++ +I+ KR+AK  G +YV  + KL+F++RI+GIN + PK +K+LQLLRL +I +G F+KV KATL +L  +EPYV YGYP+  ++R+L+YKRG+GK+NKQR+ L+DN+IIE  LG++GI+ ++DLIHEI+TVGPHFK+ANNFLW
Sbjct:   41 RAIILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLW 203          
BLAST of CX077624 vs. ExPASy Swiss-Prot
Match: RL7_CANGA (60S ribosomal protein L7 OS=Candida glabrata GN=RPL7 PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.922e-52
Identity = 93/163 (57.06%), Postives = 126/163 (77.30%), Query Frame = 1
Query:  181 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLW 669
            R  I  R   + KEY+  ++ +I  KREAK  G +YV  + KL+F++RI+GIN + PK +K+LQLLRL QI +G F+KV KAT  +L  +EPYV YGYP+  +VR+L+YKRG+GK+NKQRIAL+DN+I+E  LG+ GI+ ++DLIHEI+TVGPHFK+ANNFLW
Sbjct:   41 RAAILERNAAHQKEYEAAERAVIDAKREAKASGSYYVEAQPKLVFVVRIKGINKIPPKPRKVLQLLRLTQINSGTFVKVTKATSELLKLIEPYVAYGYPSYSTVRQLVYKRGHGKINKQRIALSDNAIVEANLGKFGILSIDDLIHEIVTVGPHFKQANNFLW 203          
BLAST of CX077624 vs. ExPASy Swiss-Prot
Match: RL7B_SCHPO (60S ribosomal protein L7-B OS=Schizosaccharomyces pombe GN=rpl7b PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.922e-52
Identity = 99/163 (60.74%), Postives = 127/163 (77.91%), Query Frame = 1
Query:  181 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLW 669
            R+LI  R + Y  EY   ++E I L R+A+ +G ++V  E KL+F++RIRGIN + PK +KI+QLLRL QI NG+F+K NKA   ML  VEPYVTYG PN K+VRELIYKRG+GK+NKQRI L+DN+IIE ALG++ I+ +EDLIHEI TVGP+FK+A NFLW
Sbjct:   48 RELIAKRAEAYEAEYRAAEREQIELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPNFKQAANFLW 210          
The following BLAST results are available for this feature:
BLAST of CX077624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RL7_YARLI5.846e-5965.4360S ribosomal protein L7 OS=Yarrowia lipolytica GN... [more]
RL7_CHICK4.949e-5865.6460S ribosomal protein L7 OS=Gallus gallus GN=RPL7 ... [more]
RL7_ASHGO1.141e-5460.1260S ribosomal protein L7 OS=Ashbya gossypii GN=RPL... [more]
RL7C_SCHPO1.946e-5456.5460S ribosomal protein L7-C OS=Schizosaccharomyces ... [more]
RL7_DEBHA1.261e-5357.6760S ribosomal protein L7 OS=Debaryomyces hansenii ... [more]
RL7_CAEEL1.648e-5360.3860S ribosomal protein L7 OS=Caenorhabditis elegans... [more]
RL7B_YEAST6.261e-5355.8360S ribosomal protein L7-B OS=Saccharomyces cerevi... [more]
RL7A_YEAST6.261e-5355.8360S ribosomal protein L7-A OS=Saccharomyces cerevi... [more]
RL7_CANGA6.922e-5257.0660S ribosomal protein L7 OS=Candida glabrata GN=RP... [more]
RL7B_SCHPO6.922e-5260.7460S ribosomal protein L7-B OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_57H06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-57H06-O12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077624 ID=CX077624; Name=CX077624; organism=Citrus sinensis; type=EST; length=670bp
CGCCTCCGTGAAGAAGATAGATCTAAAAGACCTCTAAGAACAAATTGAAC
CAGAGAGATGGCTGAAGCGGCAGCTGTTGTGGTACCAGAGTCAGTGTTGA
AGAAGAAGAAGAGAGAGGAGGAATGGGCATTGGCCAAGAAGCAGGAGCTG
GAAGCCGCGAAGAAGAAGAAGGCTGAGACCCGGAAGCTCATTTACAACAG
AACCAAACAGTACGCTAAAGAGTACGATGAAGAGCAAAAAGAACTCATTC
GTTTGAAGCGTGAGGCCAAGCTTAAGGGTGGATTTTATGTCAACCCAGAA
GCTAAGCTTTTGTTTATCATCAGGATTCGCGGTATCAATGCTGTTGATCC
AAAGACCAAGAAAATTTTGCAGCTTCTCCGTTTGAGACAGATTTTTAATG
GTGTCTTTTTGAAAGTGAACAAAGCCACACTCAATATGCTGCACAGAGTT
GAGCCCTATGTAACATATGGGTACCCCAATTTAAAGAGTGTCAGAGAACT
GATTTACAAGAGGGGTTACGGCAAATTAAATAAGCAGAGGATTGCTTTGA
CCGACAATTCTATCATTGAACAGGCTCTTGGGCAGCATGGAATTATCTGC
ATGGAAGATCTCATCCATGAGATTTTGACTGTTGGTCCTCACTTCAAGGA
GGCAAACAACTTCCTATGGC
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