EY702245

Overview
NameEY702245
Unique NameEY702245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702245_ssr20 microsatellite EY702245_ssr20:20..29. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702245 vs. ExPASy Swiss-Prot
Match: IOLC_CLOB8 (5-dehydro-2-deoxygluconokinase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=iolC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.514e-21
Identity = 56/175 (32.00%), Postives = 87/175 (49.71%), Query Frame = 1
Query:  100 IVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINFDQ-GARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPGE 621
            IV  G + IDF P      L+E+  F K  GG+PAN+A+ +ARLG K  F+GK+  D+FG  +       G+    I + + G    L F  + +  E   + YR   AD+ L  DE++ E I++ K       +L   P R A L+A++ AK    ++ +D + R   W +  E
Sbjct:   14 IVPIGRVAIDFNPIDINKPLSESSTFKKYLGGSPANIAVGLARLGKKIGFIGKVSKDQFGEFVVNYFDNEGIDTSQIKYSKNGENLGLTFTEIASPTESSILMYRQGIADLELNVDEIDEEYIKNTKAIVISGTALAKSPSREAALKALELAKRNNTVVIFDVDYRAYNWKNSDE 188          
BLAST of EY702245 vs. ExPASy Swiss-Prot
Match: IOLC_GEOTN (5-dehydro-2-deoxygluconokinase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=iolC PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 58/189 (30.69%), Postives = 96/189 (50.79%), Query Frame = 1
Query:  103 VSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINFDQ-GARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPGEAREQIMSIWDKAEVI 666
            ++ G + ID         + E   F K  GG+PAN+AI +ARLG K  F+G++ DD+ G  +   LK NG+    +  D+ G+ T LAF  +++  +   + YR+  AD+ L P++++ + IR AK       +L   P R A   A++ A+  G ++ +D + R   W S  E         +K +VI
Sbjct:   15 IAVGRLCIDLNANEIHRPMEETVTFTKYVGGSPANIAIGMARLGMKTGFIGRVADDQMGRFIVQYLKNNGIDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIHEDYIRQAKCLLISGTALAKSPSREAVFLALEYARRHGVVVFFDLDYRPYTWQSKEETAIYYNLAAEKCDVI 203          
BLAST of EY702245 vs. ExPASy Swiss-Prot
Match: IOLC_LISMO (5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes GN=iolC PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 54/190 (28.42%), Postives = 100/190 (52.63%), Query Frame = 1
Query:  100 IVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPGEAREQIMSIWDKAEVI 666
            +++ G   ID         + E   F K  GG+PAN+AI  A+LG K  F+GK+ DD+ G  +   +++  ++ DG+  D +G +  LAF  +++  E   + YR   AD+ L P+E++ + I+ A+V      +L   P R A L+A+  A++   +++++ + R   W +  E       + ++A+VI
Sbjct:   13 LITVGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVVVAFELDYRPYTWKNSEETAVYYSLVAEQADVI 202          
BLAST of EY702245 vs. ExPASy Swiss-Prot
Match: IOLC_PHOPR (5-dehydro-2-deoxygluconokinase OS=Photobacterium profundum GN=iolC PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.855e-20
Identity = 53/175 (30.29%), Postives = 98/175 (56.00%), Query Frame = 1
Query:  103 VSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPGEA 624
            +  G   +D     +   +A+  GF K  GG+ AN+A+A+++LGGK  F+G + DD FG  + G + E G++ DG+  D  G+RT++AF  ++ + +   + YRN ++D+ L+P++++   I  +K+      +L   P R A L AM+ A+ +  ++  D + R   W +  +A
Sbjct:   15 IVLGRAGVDLYAREANTDMADISGFNKFVGGSAANIAVAISKLGGKVGFIGCVADDAFGGYVRGYMTEQGINLDGMMTDNSGSRTSVAFTEMKPN-DCTVLIYRNKASDLTLKPEQVDPAYIAQSKMLVVTGTALSESPSREATLIAMEHARRSNTVVVLDVDYRPYSWRTDVDA 188          
BLAST of EY702245 vs. ExPASy Swiss-Prot
Match: IOLC_GEOKA (5-dehydro-2-deoxygluconokinase OS=Geobacillus kaustophilus GN=iolC PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.855e-20
Identity = 58/189 (30.69%), Postives = 95/189 (50.26%), Query Frame = 1
Query:  103 VSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINFDQ-GARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPGEAREQIMSIWDKAEVI 666
            ++ G + ID         + E   F K  GG+PAN+AI +ARLG K  F+G++ DD+ G  +   LK NG+    +  D+ G+ T LAF  +++  +   + YR+  AD+ L P++++ + IR AK       +L   P R A   A+  A+  G ++ +D + R   W S  E         +K +VI
Sbjct:   15 IAVGRLCIDLNANEIHRPMEETMTFTKYVGGSPANIAIGMARLGMKTGFIGRVADDQMGRFIVRYLKNNGIDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIDEDYIRRAKCLLISGTALAKSPSREAVFLALDYARRHGTVVVFDLDYRPYTWQSKEETAIYYNLAAEKCDVI 203          
BLAST of EY702245 vs. ExPASy Swiss-Prot
Match: IOLC_CLOBA (5-dehydro-2-deoxygluconokinase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=iolC PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.729e-20
Identity = 55/175 (31.43%), Postives = 90/175 (51.43%), Query Frame = 1
Query:  100 IVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINF-DQGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPGE 621
            IV  G + IDF PT     L+++  F K  GG+PAN+A+ ++RLG K  F+GK+  D+FG  +       G+    I + + G    L F  + +  E   + YRN  AD+ L  +E++ E I++ K       +L   P R A L+A++ AK+   ++ +D + R   W +  E
Sbjct:   14 IVPIGRVAIDFNPTDINRPLSKSMTFKKYLGGSPANIAVGLSRLGKKVGFIGKVSKDQFGKFVVDYFNNEGIDTSQIKYAENGESLGLTFTEIASPTESSILMYRNGIADLELDVNEIDEEYIKNTKAIVISGTALAKSPSREAALKALELAKKNDTVVIFDVDYREYNWKNKDE 188          
BLAST of EY702245 vs. ExPASy Swiss-Prot
Match: IOLC_BACHD (5-dehydro-2-deoxygluconokinase OS=Bacillus halodurans GN=iolC PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.729e-20
Identity = 55/190 (28.95%), Postives = 96/190 (50.53%), Query Frame = 1
Query:  100 IVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINFDQ-GARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPGEAREQIMSIWDKAEVI 666
            +++ G   ID         + E   F K  GG+PAN+ I  ++LG KA F+GK+ DD+ G  +   ++  GV    +  DQ G +T LAF  +++  E   + YR   AD+ L P+E+N   IR +K+      +L   P R A L+A++ AK     + ++ + R   W +P E       + ++++++
Sbjct:   13 LIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIV 202          
BLAST of EY702245 vs. ExPASy Swiss-Prot
Match: IOLC_CLOBB (5-dehydro-2-deoxygluconokinase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=iolC PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.870e-20
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 1
Query:  100 IVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINF-DQGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPGE 621
            IV  G + IDF P      L+E+  F K  GG+PAN+A+ ++RLG K  F+GK+  D+FG  +       G+    I + + G    L F  + +  E   + YRN  AD+ L  +E++ E I++ K       +L   P R A L+A++ AK+   ++ +D + R   W +  E
Sbjct:   14 IVPIGRVAIDFNPIDINRPLSESKTFKKYLGGSPANIAVGLSRLGKKVGFIGKVSKDQFGKFVVDYFDNEGIDTSQIKYAENGESLGLTFTEIASPTESSILMYRNGIADLELDVNEIDEEYIKNTKAIVISGTALAKSPSREAALKALELAKKNDTIVIFDVDYREYNWKNKDE 188          
BLAST of EY702245 vs. ExPASy Swiss-Prot
Match: IOLC_LISMH (5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=iolC PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.851e-19
Identity = 53/190 (27.89%), Postives = 98/190 (51.58%), Query Frame = 1
Query:  100 IVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPGEAREQIMSIWDKAEVI 666
            +++ G   ID         + E   F K  GG+PAN+AI  A+LG K  F+GK+  D+ G  +   +++  ++ DG+  D +G +  LAF  +++  E   + YR   AD+ L P+E++ + I+ A+V      +L   P R A L+A+  A++    ++++ + R   W +  E       + ++A+VI
Sbjct:   13 LITVGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIAIGTAKLGLKVGFIGKISADQHGRFIEKYMRDLSINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVAIAFELDYRPYTWTNTEETAVYYSLVAEQADVI 202          
BLAST of EY702245 vs. ExPASy Swiss-Prot
Match: IOLC_LISIN (5-dehydro-2-deoxygluconokinase OS=Listeria innocua GN=iolC PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.851e-19
Identity = 53/190 (27.89%), Postives = 98/190 (51.58%), Query Frame = 1
Query:  100 IVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVSADGINFD-QGARTALAFVTLRADGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLIVEPCRSAHLEAMKAAKEAGALLSYDPNLRLPLWPSPGEAREQIMSIWDKAEVI 666
            +++ G   ID         + E   F K  GG+PAN+AI  A+LG K  F+GK+ DD+ G  +   +++  ++ DG+  D  G +  LAF  +++  E   + YR   AD+ L P+E++ + I+  +V      +L   P R A L+A+  A++   +++++ + R   W +  E       + ++A+VI
Sbjct:   13 LITVGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLNINTDGMVKDTAGRKVGLAFTEIKSPEECSILMYRENVADLYLTPEEISEDYIKETRVLLVSGTALAQSPSREAVLKAVHLAQKNDVIVAFELDYRPYTWKNTEETAVYYSLVAEQADVI 202          
The following BLAST results are available for this feature:
BLAST of EY702245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
IOLC_CLOB87.514e-2132.005-dehydro-2-deoxygluconokinase OS=Clostridium beij... [more]
IOLC_GEOTN1.282e-2030.695-dehydro-2-deoxygluconokinase OS=Geobacillus ther... [more]
IOLC_LISMO1.674e-2028.425-dehydro-2-deoxygluconokinase OS=Listeria monocyt... [more]
IOLC_PHOPR2.855e-2030.295-dehydro-2-deoxygluconokinase OS=Photobacterium p... [more]
IOLC_GEOKA2.855e-2030.695-dehydro-2-deoxygluconokinase OS=Geobacillus kaus... [more]
IOLC_CLOBA3.729e-2031.435-dehydro-2-deoxygluconokinase OS=Clostridium botu... [more]
IOLC_BACHD3.729e-2028.955-dehydro-2-deoxygluconokinase OS=Bacillus halodur... [more]
IOLC_CLOBB4.870e-2031.435-dehydro-2-deoxygluconokinase OS=Clostridium botu... [more]
IOLC_LISMH1.851e-1927.895-dehydro-2-deoxygluconokinase OS=Listeria monocyt... [more]
IOLC_LISIN1.851e-1927.895-dehydro-2-deoxygluconokinase OS=Listeria innocua... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-F09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702245 ID=EY702245; Name=EY702245; organism=Citrus sinensis; type=EST; length=869bp
TATTATTTCTCTCCATAAACTCTCTCTCTATTCATACACAACGTTTCGAT
TTTTGTACAAATGGCTACAACCGGCGCCGTTTCATCCTCCTCAAGCCTGA
TCGTGTCCTTCGGCGAGATGCTCATAGACTTCGTCCCGACGGTCTCCGGC
GTCTCCCTCGCCGAGGCCCCTGGATTCCTCAAGGCCCCCGGCGGCGCCCC
CGCCAACGTCGCCATAGCTGTAGCTCGCCTCGGAGGCAAGGCAGCCTTCG
TCGGCAAGCTCGGCGACGACGAGTTCGGTCACATGCTCGCTGGGATCTTG
AAGGAGAACGGAGTCAGCGCTGACGGCATCAACTTTGACCAGGGTGCCAG
AACTGCCCTTGCATTCGTGACCCTGCGGGCTGACGGCGAGCGCGAGTTCA
TGTTTTACAGAAACCCCAGCGCTGATATGCTCTTGAGACCCGACGAGCTT
AATCTTGAGCTGATCAGATCTGCCAAAGTTTTCCACTATGGATCAATAAG
CCTGATAGTGGAGCCATGCCGATCAGCTCACTTAGAGGCAATGAAAGCAG
CCAAGGAAGCAGGAGCCCTGCTCTCATACGACCCCAACCTCCGGCTACCG
TTGTGGCCCTCGCCGGGAGAAGCGCGTGAGCAGATAATGAGCATCTGGGA
CAAGGCAGAGGTAATCAAGGCAGTGATGTGGAGCTTGATTCCCTCACCGG
AGTGACAGATTGATGATGAATTCACTTGTCGCTCTGGCACCCCACTTGGA
ACTCCTTCTGGGCACCCTTGGTGAGCATGGCTGTAGATACTCACTTAAAA
TTTCCAAGGAACAGGGGATGCTTTTCTGTTGAACCGGTAAAACCACCCGC
CCCCGAGAACATTTTTTGG
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