EY702238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_SALTY (3-isopropylmalate dehydrogenase OS=Salmonella typhimurium GN=leuB PE=1 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 3.093e-17 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNGEGG 812 IDN M L+K+PS FDVL+ NL+GDI+SD CA + G +G+ PS + E G Sbjct: 226 IDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG 276 HSP 2 Score: 49.2914 bits (116), Expect = 3.093e-17 Identity = 55/215 (25.58%), Postives = 92/215 (42.79%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVPVEWE---EHY--VGTEID----PRTQSFLT-WESLESVRRNKV-GLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKT--------RYDDVNLITIRENTEGEY----SGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHM 648 + PGDGIGPE+ +V + HY G ID P ++ + E +++ V G K P + R L LRK L++N+RP G + + +++ +RE T G Y G E ++ R R+A AF A+ R +V++I KAN++Q + L+ + +VA+ YP++ + Sbjct: 9 VLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPKWENLPPESQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAFDTEVYHRFEIERIARIAFESARKR-RRKVTSIDKANVLQSSI-LWREIVNDVAKTYPDVEL 221
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_SALCH (3-isopropylmalate dehydrogenase OS=Salmonella choleraesuis GN=leuB PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 3.093e-17 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNGEGG 812 IDN M L+K+PS FDVL+ NL+GDI+SD CA + G +G+ PS + E G Sbjct: 226 IDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG 276 HSP 2 Score: 49.2914 bits (116), Expect = 3.093e-17 Identity = 55/215 (25.58%), Postives = 92/215 (42.79%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVPVEWE---EHY--VGTEID----PRTQSFLT-WESLESVRRNKV-GLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKT--------RYDDVNLITIRENTEGEY----SGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHM 648 + PGDGIGPE+ +V + HY G ID P ++ + E +++ V G K P + R L LRK L++N+RP G + + +++ +RE T G Y G E ++ R R+A AF A+ R +V++I KAN++Q + L+ + +VA+ YP++ + Sbjct: 9 VLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPKWENLPPESQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAFDTEVYHRFEIERIARIAFESARKR-RRKVTSIDKANVLQSSI-LWREIVNDVAKTYPDVEL 221
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_CARHZ (3-isopropylmalate dehydrogenase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=leuB PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 4.018e-17 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 624 REVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN-NGEGGL 815 +E P + +DNC M L++NP FDV+V N++GDI++D + + G +GL PS + NG+ GL Sbjct: 218 KEYPDVELSYMYVDNCAMQLIRNPRQFDVIVTENMFGDILTDEGSVLAGSIGLLPSASLNGKFGL 282 HSP 2 Score: 52.373 bits (124), Expect = 4.018e-17 Identity = 56/221 (25.34%), Postives = 99/221 (44.80%), Query Frame = 1 Query: 58 PITATLFPGDGIGPEIAESVKQVFRT--AEVPVEWEEHY---VGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIG-------KGHRSLNLTLRKELNLYANVRPCYSLPGYKTR-------YDDVNLITIRENTEGEYSG-----LEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHM 648 P + PGDGIGPEI + +V + + + + Y G ID R L E++E ++ L G + P + L +RK +LYAN+RP P K + V+++ +RE T G Y G Q + V+++L I T + RV F A+ R +++ + KAN+++ + + + E+ ++YP++ + Sbjct: 9 PFKILVLPGDGIGPEIIKEAVKVLKALGEKKGITFNFQYGLIGGAAIDERGVP-LPEETVELGKQCDAILLGAVGGPKWDNLPPEIRPELGGLLKIRKVFDLYANLRPVMFFPELKNASPLKPDIIEGVDILMVRELTGGLYFGEKKRFTTEQGEQAVIDTL-IYTEKEVERVVRLGFELAQKR-RGKLTLVDKANVLE-SSRFWREITGEIKKEYPDVEL 225
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_SALPA (3-isopropylmalate dehydrogenase OS=Salmonella paratyphi A GN=leuB PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 8.835e-17 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNGEGG 812 IDN M L+K+PS FDVL+ NL+GDI+SD CA + G +G+ PS + E G Sbjct: 226 IDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG 276 HSP 2 Score: 47.7506 bits (112), Expect = 8.835e-17 Identity = 54/215 (25.12%), Postives = 94/215 (43.72%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTA----EVPVEWEEHYV-GTEID----PRTQSFLT-WESLESVRRNKV-GLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKT--------RYDDVNLITIRENTEGEY----SGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHM 648 + PGDGIGPE+ +V ++ + + V G ID P ++ + E +++ V G K P + R L LRK L++N+RP G + + +++ +RE T G Y G E ++ R R+A AF A+ R +V++I KAN++Q + L+ + +VA+ YP++ + Sbjct: 9 VLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSRYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPKWENLPPESQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAFDTEVYHRFEIERIARIAFESARKR-RRKVTSIDKANVLQSSI-LWREIVNDVAKTYPDVEL 221
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: TTUC_PSEPU (Tartrate dehydrogenase/decarboxylase OS=Pseudomonas putida PE=1 SV=3) HSP 1 Score: 60.4622 bits (145), Expect = 2.522e-16 Identity = 39/127 (30.71%), Postives = 60/127 (47.24%), Query Frame = 1 Query: 301 LTLRKELNLYANVRPCYSLPGY-----KTRYDDVNLITIRENTEGEYSGLE----HQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRK 654 L R+E + Y N+RP PG + D++ + +RENTEGEYS L +V I TR+ R+ +YAF A+ R+ V++ K+N M + + K +A YP + K Sbjct: 95 LKFRREFDQYVNIRPVRLFPGVPCALANRKVGDIDFVVVRENTEGEYSSLGGIMFENTENEIVIQESIFTRRGVDRILKYAFDLAEKRERKHVTSATKSNGMAISMPYWDKRTEAMAAHYPHVSWDK 221 HSP 2 Score: 46.2098 bits (108), Expect = 2.522e-16 Identity = 26/63 (41.27%), Postives = 36/63 (57.14%), Query Frame = 3 Query: 642 TYEEVXIDNCCMMLVKNPSAFDVLVMP-NLYGDIISDLCAGVIGGLGLTPSCN-NGEGGLPCL 824 ++++ ID C V P FDV+V+ NL+GDI+SDL G +G+ PS N N E P L Sbjct: 218 SWDKQHIDILCARFVLQPERFDVVVVASNLFGDILSDLGPACAGTIGIAPSANLNPERNFPSL 280
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_BUCBP (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=leuB PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 7.197e-16 Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN 797 +DN M ++KNPS FDVL+ NL+GDI+SD CA + G +GL PS + Sbjct: 226 VDNAAMQIIKNPSQFDVLLCSNLFGDILSDECAAITGSIGLLPSAS 271 HSP 2 Score: 43.8986 bits (102), Expect = 7.197e-16 Identity = 56/224 (25.00%), Postives = 99/224 (44.20%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAE----VPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKG-------HRSLNLTLRKELNLYANVR--PCYS----LPGYKTRYDDV--NLITIRENTEGEY----SGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKLXSTIAA 675 + PGDGIGPEI ++ R + + + +E VG + L ++L+ R + L G + P + R L LRK NL++N+R YS L K+R ++ +++ +RE T G Y G + ++ + R+A AF A T R +V++I KAN+++ + + K ++ +Y ++ + L AA Sbjct: 9 VLPGDGIGPEIMREGYKILRILKSKLSLNIMTQEFDVGGVAIDKYGVALPKKTLQGCRDSHAILFGSIGGPKWEDLPSHLQPERGALLPLRKYFNLFSNLRLARIYSGLEKLSPLKSRISNLGCDILCVRELTGGIYFGDPKGSKVSKSLNCAFDTEVYYQFEIERIAHMAFDLALTR-RCKVTSIDKANVLE-SSMFWRKIVNRISTQYSQVKLSHLYVDNAA 230
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_RHOOB (3-isopropylmalate dehydrogenase OS=Rhodococcus opacus (strain B4) GN=leuB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.022e-15 Identity = 76/277 (27.44%), Postives = 120/277 (43.32%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKG----PMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKT---RYDDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKLXSTIAA*CL*RIPA---LSMCW*CLTSMVTSLVTYVLG*LVDWA*PLVAIMGKEDCPA*TGHGSTPDIAGK 861 + PGDGIG E+ +V R +E E+ +G T L L ++R + L G P TP G R L L +R L+ + N+RP PG K+ D++ + +RE TEG Y+G + G + + I T + RV YAF A+T R+ V+ IHK N++ ++ + V+ +YP++ A + P+ + + ++T L V G + A + G HGS PDIAG+ Sbjct: 5 VIPGDGIGVEVTAEALKVLRKLVPDLETTEYDLGARRYNATGELLPDADLAAIREHDAILLGAIGDPSVTP-GVLERGLLLNMRFALDHHVNLRPSQLYPGSKSPLAAQPDIDFVVVREGTEGPYTGNGGAIRVGTPHEIATEVSINTWFGAERVVRYAFALAQTR-RKHVTLIHKTNVLSNAGAIWTRAVETVSAEYPDVETAYCHIDAATIYMVTDPSRFDVIVTDNLFGDIITDLAGAVTGGIGLAASGNIDASGTNPSMFEPVHGSAPDIAGQ 279
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_CORK4 (3-isopropylmalate dehydrogenase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=leuB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.022e-15 Identity = 78/281 (27.76%), Postives = 122/281 (43.42%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEV----PVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKG----PMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDD---VNLITIRENTEGEYSG----LEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKLXSTIAA*CL*RIPA---LSMCW*CLTSMVTSLVTYVLG*LVDWA*PLVAIMGKEDCPA*TGHGSTPDIAGK 861 + PGDGIG E+ +V R A +E ++ +G R LT + L S+R + L G P P G R L L +R L+ + N+RP PG + D V+ I +RE TEG Y+G + V + TR RV YAF A+ R++++ +HK N++ GL+ + +VA++Y ++ + A + P+ + + ++T L V G + A + G HGS PDIAGK Sbjct: 5 VIPGDGIGTEVTAEALKVMRAALAGSGESIETTDYDLGARRYLRNGELLTDDDLASLREHDAILLGAVGDPRTVPSGVLERGLLLKMRFVLDHHVNLRPSVLYPGVTSPLSDPGKVDFIVVREGTEGLYAGNGGSIRVDTPHEVANETSVNTRYGVERVVRYAFDRAQER-RKKLTLVHKTNVLVYAGGLWQRTVDQVAQEYLDVTVDYCHIDAATIYMVTDPSRFDVIVTDNLFGDIITDLAGAVTGGIGLAASGNIDATGTNPSMFEPVHGSAPDIAGK 284
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_SYNSC (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain CC9605) GN=leuB PE=3 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 1.216e-15 Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNGEGG 812 +DN M LV++P FDVL+ NL+GDI+SD A + G +G+ PS + G G Sbjct: 223 VDNAAMQLVRDPRQFDVLLTGNLFGDILSDEAAMLTGSIGMLPSASLGSEG 273 HSP 2 Score: 50.8322 bits (120), Expect = 1.216e-15 Identity = 53/190 (27.89%), Postives = 83/190 (43.68%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQ----VFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPI------GKGHRSLNLTLRKELNLYANVRPCYSLPGY-------KTRYDDVNLITIRENTEGEYSGLEHQVV--RGVVESLKIITRQASL--RVAEYAFHYAKTHGRERVSAIHKANIM 579 L PGDGIGPEI +Q V R + +EE +G T L +L++ + L + +P K + L LR + L+AN+RP +P + + V+L+ +RE T G Y G + G +T AS R+A+ AF A+ R R+ ++ KAN++ Sbjct: 8 LLPGDGIGPEITAVARQLLEVVSRRHGFSLSFEEQPIGGSAIDATGEPLPASTLDACKAADAVLLAAIGSPCFDSLPREKRPETGLLGLRAGMELFANLRPVKIVPALIDASSLKREVIEGVDLMVVRELTGGIYFGQPKGRIETEGDERGFNTMTYSASEVDRIAKVAFEIAQER-RGRLCSVDKANVL 196
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_RHOSR (3-isopropylmalate dehydrogenase OS=Rhodococcus sp. (strain RHA1) GN=leuB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.277e-15 Identity = 75/277 (27.08%), Postives = 120/277 (43.32%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKG----PMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKT---RYDDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKLXSTIAA*CL*RIPA---LSMCW*CLTSMVTSLVTYVLG*LVDWA*PLVAIMGKEDCPA*TGHGSTPDIAGK 861 + PGDGIG E+ +V R ++ E+ +G T L L ++R + L G P TP G R L L +R L+ + N+RP PG K+ D++ + +RE TEG Y+G + G + + I T + RV YAF A+T R+ V+ IHK N++ ++ + V+ +YP++ A + P+ + + ++T L V G + A + G HGS PDIAG+ Sbjct: 5 VIPGDGIGVEVTAEALKVLRKLVPDLQTTEYDLGARRYNATGELLPDADLAAIREHDAILLGAIGDPSVTP-GVLERGLLLNMRFALDHHVNLRPSQLYPGSKSPLAAQPDIDFVVVREGTEGPYTGNGGAIRVGTPHEIATEVSINTWFGAERVVRYAFALAQTR-RKHVTLIHKTNVLSNAGAIWTRAVETVSAEYPDVETAYCHIDAATIYMVTDPSRFDVIVTDNLFGDIITDLAGAVTGGIGLAASGNIDASGTNPSMFEPVHGSAPDIAGQ 279 The following BLAST results are available for this feature:
BLAST of EY702238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702238 ID=EY702238; Name=EY702238; organism=Citrus sinensis; type=EST; length=907bpback to top |