EY702238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_LEIXX (3-isopropylmalate dehydrogenase OS=Leifsonia xyli subsp. xyli GN=leuB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.635e-13 Identity = 80/288 (27.78%), Postives = 130/288 (45.14%), Query Frame = 1 Query: 61 ITATLFPGDGIGPE-IAESVKQVFR-TAEVPVEWEEHY--VGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGH-------RSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKLXSTIAA*CL*RIPA---LSMCW*CLTSMVTSLVTYVLG*LVDWA*PLVAIMGKEDCPA*TGHGSTPDIAGK 861 + + PGDGIGPE IAE+VK + TA + +++ Y +G + T LT + L ++R + L G + G R L L LR L+ Y N+RP PG + +V+ + +RE TEG+Y G + G V + + T RV YAF A R++++ +HK N++ L+ + +A ++PE+ + L A L PA + + ++T L + G + A + +G+ HGS PDIAG+ Sbjct: 5 VQLVVIPGDGIGPEVIAEAVKALDAVTAGSGLAFQKTYFSLGADRYLATGDVLTDDDLAAIRGHDAILLGAVGGRPGDPRLAGANVERGLLLRLRFSLDHYVNLRPTTLFPGIASPLAAPGEVDFVVVREGTEGQYVGNGGAIRPGTPHEVANEVSVNTAYGVERVVRYAFEQAGQR-RKKLTLVHKTNVLTFAGSLWKRIVDALAAEHPEVAVDYLHVDAATIFLVTDPARFDVIVTDNLFGDILTDLAAAISGGIGLAASGNINPVGEFPSMFEPVHGSAPDIAGE 291
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_NITWN (3-isopropylmalate dehydrogenase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=leuB PE=3 SV=1) HSP 1 Score: 48.1358 bits (113), Expect = 5.006e-13 Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 3 Query: 663 DNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNGE 806 D+ M LV+ P FDV+V NL+GD++SD+ A + G LG+ PS + G+ Sbjct: 226 DSGGMQLVRWPKQFDVIVTDNLFGDMLSDIAAMLTGSLGMLPSASLGD 273 HSP 2 Score: 47.3654 bits (111), Expect = 5.006e-13 Identity = 56/209 (26.79%), Postives = 92/209 (44.02%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAE----VPVEWEEHYV-GTEIDPRTQSFLTWESLESVRRNKV---GLKGPM--ATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTR-------YDDVNLITIRENTEGEYSGLEHQVV------RGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEK 630 L PGDGIGPE+ VK++ + E EE V G D S +++ + V + GP + P + L LRK+L LYAN+RP P + ++++ +RE T G Y G V + V++ T + R+A AF A+ R +++++ K N+M KT L+ + +V ++ Sbjct: 8 LLPGDGIGPEVMAEVKRLVGWLDAQGIAKFETEEGLVGGASYDADKVSITDATMAKALAADAVLFGAVGGPKWDSVPYEVRPEAGLLRLRKDLALYANLRPAICYPALAESSSLKPEVVEGLDIMIVRELTGGVYFGEPKTVTDLGNGQKRAVDTQVYDTYEIE-RIARVAFDLARKR-RNKLTSMEKRNVM-KTGVLWHEVVTQVHQR 213
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: TTUC4_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC' OS=Agrobacterium vitis GN=ttuC' PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.200e-13 Identity = 55/210 (26.19%), Postives = 100/210 (47.62%), Query Frame = 1 Query: 79 PGDGIGPEIAESVKQVF-----RTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSL---NLTLRKELNLYANVRPCYSLPGYKTRY-----DDVNLITIRENTEGEYSGLEHQVVRGVVESL----KIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKL 657 P DGIGPE+ + QV R+ + + E G++ + + + LE +++ G + P H +L L + + + YANVRP LPG D++ + +REN+EGEYSG + +G+ E + I TR R+ YAF A+ R+ ++ + K+N + ++ + EV++++P++ K+ Sbjct: 10 PADGIGPEVIAAGLQVLEALEKRSGDFSIHTETFDWGSDYYKKNGVMMPADGLEQLKKFDAIFFGAVGAPDVPDHITLWGLRLPICQGFDQYANVRPTKVLPGITPPLRNCGPGDLDWVIVRENSEGEYSGHGGRAHKGLPEEVGTEVAIFTRVGVTRIMRYAFKLAQARPRKLLTVVTKSNAQRHGMVMWDEIAAEVSKEFPDVTWDKM 219
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: TTUC2_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC OS=Agrobacterium vitis GN=ttuC PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.200e-13 Identity = 55/210 (26.19%), Postives = 100/210 (47.62%), Query Frame = 1 Query: 79 PGDGIGPEIAESVKQVF-----RTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSL---NLTLRKELNLYANVRPCYSLPGYKTRY-----DDVNLITIRENTEGEYSGLEHQVVRGVVESL----KIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKL 657 P DGIGPE+ + QV R+ + + E G++ + + + LE +++ G + P H +L L + + + YANVRP LPG D++ + +REN+EGEYSG + +G+ E + I TR R+ YAF A+ R+ ++ + K+N + ++ + EV++++P++ K+ Sbjct: 10 PADGIGPEVIAAGLQVLEALEKRSGDFSIHTETFDWGSDYYKKNGVMMPADGLEQLKKFDAIFFGAVGAPDVPDHITLWGLRLPICQGFDQYANVRPTKVLPGITPPLRNCGPGDLDWVIVRENSEGEYSGHGGRAHKGLPEEVGTEVAIFTRVGVTRIMRYAFKLAQARPRKLLTVVTKSNAQRHGMVMWDEIAAEVSKEFPDVTWDKM 219
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: TTUC5_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC' OS=Agrobacterium vitis GN=ttuC' PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13 Identity = 56/210 (26.67%), Postives = 99/210 (47.14%), Query Frame = 1 Query: 79 PGDGIGPEIAESVKQVF-----RTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSL---NLTLRKELNLYANVRPCYSLPGYKTRY-----DDVNLITIRENTEGEYSGLEHQVVRGVVESL----KIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKL 657 P DGIGPE+ + QV R+ + + E G++ + + + L+ +++ G + P H +L L + + + YANVRP LPG D++ + +REN+EGEYSG + RG+ E + I TR R+ YAF A+ R+ ++ + K+N + ++ + EVA ++P++ K+ Sbjct: 10 PADGIGPEVIAAGLQVLEALEQRSGDFKIHTETFDWGSDYYKKHGVMMPADGLDKLKKFDAIFFGAVGAPDVPDHITLWGLRLPICQGFDQYANVRPTKILPGITPPLRNCGPGDLDWVIVRENSEGEYSGHGGRAHRGLPEEVGTEVAIFTRVGVTRIMRYAFKLAQARPRKLLTVVTKSNAQRHGMVMWDEIAAEVATEFPDVTWDKM 219
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: TTUC3_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC' OS=Agrobacterium vitis GN=ttuC' PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13 Identity = 56/210 (26.67%), Postives = 99/210 (47.14%), Query Frame = 1 Query: 79 PGDGIGPEIAESVKQVF-----RTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSL---NLTLRKELNLYANVRPCYSLPGYKTRY-----DDVNLITIRENTEGEYSGLEHQVVRGVVESL----KIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKL 657 P DGIGPE+ + QV R+ + + E G++ + + + L+ +++ G + P H +L L + + + YANVRP LPG D++ + +REN+EGEYSG + RG+ E + I TR R+ YAF A+ R+ ++ + K+N + ++ + EVA ++P++ K+ Sbjct: 10 PADGIGPEVIAAGLQVLEALEQRSGDFKIHTETFDWGSDYYKKHGVMMPADGLDKLKKFDAIFFGAVGAPDVPDHITLWGLRLPICQGFDQYANVRPTKILPGITPPLRNCGPGDLDWVIVRENSEGEYSGHGGRAHRGLPEEVGTEVAIFTRVGVTRIMRYAFKLAQARPRKLLTVVTKSNAQRHGMVMWDEIAAEVATEFPDVTWDKM 219
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: TTUC1_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC OS=Agrobacterium vitis GN=ttuC PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13 Identity = 56/210 (26.67%), Postives = 99/210 (47.14%), Query Frame = 1 Query: 79 PGDGIGPEIAESVKQVF-----RTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSL---NLTLRKELNLYANVRPCYSLPGYKTRY-----DDVNLITIRENTEGEYSGLEHQVVRGVVESL----KIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKL 657 P DGIGPE+ + QV R+ + + E G++ + + + L+ +++ G + P H +L L + + + YANVRP LPG D++ + +REN+EGEYSG + RG+ E + I TR R+ YAF A+ R+ ++ + K+N + ++ + EVA ++P++ K+ Sbjct: 10 PADGIGPEVIAAGLQVLEALEQRSGDFKIHTETFDWGSDYYKKHGVMMPADGLDKLKKFDAIFFGAVGAPDVPDHITLWGLRLPICQGFDQYANVRPTKILPGITPPLRNCGPGDLDWVIVRENSEGEYSGHGGRAHRGLPEEVGTEVAIFTRVGVTRIMRYAFKLAQARPRKLLTVVTKSNAQRHGMVMWDEIAAEVATEFPDVTWDKM 219
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_DEHSC (3-isopropylmalate dehydrogenase OS=Dehalococcoides sp. (strain CBDB1) GN=leuB PE=3 SV=1) HSP 1 Score: 50.0618 bits (118), Expect = 3.120e-12 Identity = 22/58 (37.93%), Postives = 36/58 (62.07%), Query Frame = 3 Query: 624 REVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN 797 ++ P E V +D C M L+ P+ FDV+V NL+GDI++D + + G +G+ PS + Sbjct: 211 KDYPEVKVEHVLVDACAMKLILAPTYFDVIVTENLFGDILTDEASMLAGSMGMLPSAS 268 HSP 2 Score: 42.743 bits (99), Expect = 3.120e-12 Identity = 51/214 (23.83%), Postives = 88/214 (41.12%), Query Frame = 1 Query: 70 TLFPGDGIGPEIAES----VKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATP------IGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTR-------YDDVNLITIRENTEGEYSGLEHQ------VVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 T+ PGDGIGPE+ + + V + + +++ +G + L+ +L +++ L + P + L LRK L L+AN+RP P + I IRE T G Y + +R +S+ + R+ F AK ++ VS + KAN++ + L+ + EVA+ YPE+ Sbjct: 6 TVLPGDGIGPEVMDEGLKVLNAVAKKYKHTFKYQYGLIGGCCIDKEGVALSPAALAMCKKSDAVLLAAVGDPRFDDPKLPVHPEDGLLALRKGLGLFANIRPVKVAPSLVNSTPIKAEIVKGTDFIFIRELTGGVYFAKPKKRWTTPAGIRKATDSMTYSENEIE-RIVRVGFELAKNRKKKLVS-VDKANVL-LSSRLWRQIVIEVAKDYPEV 216
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_RHILO (3-isopropylmalate dehydrogenase OS=Rhizobium loti GN=leuB PE=3 SV=1) HSP 1 Score: 46.9802 bits (110), Expect = 3.120e-12 Identity = 23/58 (39.66%), Postives = 36/58 (62.07%), Query Frame = 3 Query: 645 YEEVXIDNCC-----MMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNG 803 Y +V +D+ M LV+ P FDV+V NL+GD++SD+ A + G +G+ PS + G Sbjct: 215 YADVKLDHMLADAGGMQLVRWPKQFDVIVTDNLFGDMLSDIAAMLTGSIGMLPSASLG 272 HSP 2 Score: 45.8246 bits (107), Expect = 3.120e-12 Identity = 48/194 (24.74%), Postives = 84/194 (43.30%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVPV----EWEEHYVG-TEIDPRTQSFLTWESLESVRRNKV---GLKGPM--ATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTR-------YDDVNLITIRENTEGEYSGLEHQVV-------RGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQ 582 L PGDGIGPE VK++ + +E VG D + + +++ + V + GP A P + L LRK++ L+AN+RP P + ++++ +RE T G Y G Q++ RG+ ++ R++ AF A+T + V+++ K N+M+ Sbjct: 8 LLPGDGIGPEAMAEVKKLISAMNEKLGSGFATDEGLVGGCAYDAHGAAISDADMAKAMAADAVLFGAVGGPKWDAVPYEVRPEAGLLRLRKDMELFANLRPAICYPALAASSSLKQEVVEGLDILIVRELTGGVYFGEPKQIIDLGNGQKRGI--DTQVYDTFEIERISGVAFELARTR-KNHVTSMEKRNVMK 198
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_BACCZ (3-isopropylmalate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=leuB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.249e-12 Identity = 80/282 (28.37%), Postives = 120/282 (42.55%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTAEVPVE-----WEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLN----LTLRKELNLYANVRP-------CYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKLXSTIAA*CL*RIP------ALSMCW*CLTSMVTSLVTYVLG*LVDWA*PLVAIMGKEDCPA*TGHGSTPDIAGK 861 GDG+GPE+ ES K+V E +EH+ G ID Q L +L + + L G + P G + L LRK L ++ANVRP + P K D+++ + +RE T G Y + V R R+ YAF A +++V++I KAN+++ + L+ EVA +YP++ + + AA L R P + + S S++ LG L P + K HGS PDIAGK Sbjct: 10 GDGVGPEVMESAKEVLHMVERLYGHHFHLQDEHFGGVAIDLTGQP-LPQRTLAACLASDAVLLGAVGGPRWDGAKERPEKGLLALRKGLGVFANVRPVTVESETAHLSPLKKA--DEIDFVVVRELTGGIYFSYPKERTDEVATDTLTYHRHEIERIVSYAFQLASKR-KKKVTSIDKANVLESSK-LWRTVTEEVALRYPDVELEHILVDAAAMELIRNPGRFDVIVTENLFGDILSDEASVLAGSLGML-----PSASHAEKGPSLYEPIHGSAPDIAGK 281 The following BLAST results are available for this feature:
BLAST of EY702238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702238 ID=EY702238; Name=EY702238; organism=Citrus sinensis; type=EST; length=907bpback to top |