EY702238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_CLAMS (3-isopropylmalate dehydrogenase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=leuB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.891e-25 Identity = 59/211 (27.96%), Postives = 97/211 (45.97%), Query Frame = 1 Query: 61 ITATLFPGDGIGPEIAESVKQVFRTA---EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKG-----PMATPIGKG--HRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 I+ + PGDGIGPE+ +V R A +V ++ ++ G T LT L ++ ++ L G P + G R L L LR + Y N+RP LPG + V+ + +RE TEG Y+G + RG + + + T R +AF A+ R+RV+ +HK N++ L+ + VA ++P++ Sbjct: 5 ISLAVVPGDGIGPEVVHEALRVLREAVPADVSLDTTQYPFGAGHFLETGQILTDSDLAALAQHDAILLGAVGGDPRDARLAGGIIERGLLLKLRFAFDHYINLRPTALLPGVASPLAAPGQVDFVVVREGTEGPYAGNGGVLRRGTEHEIATEVSVNTAHGVERTVRFAFELAEKRDRKRVTLVHKTNVLTFAGSLWQRTVDRVAAEHPDV 215 HSP 2 Score: 56.225 bits (134), Expect = 6.891e-25 Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 3 Query: 627 EVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN-NGEGGLPCL 824 E P T + + +D + LV +PS FDV+V NL+GDII+DL A + GG+GL S N N G P + Sbjct: 211 EHPDVTVDYLHVDATMIFLVTDPSRFDVIVSDNLFGDIITDLAAAISGGIGLAASGNVNPTGAFPSM 277
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_BACSU (Isocitrate dehydrogenase [NADP] OS=Bacillus subtilis GN=icd PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.222e-25 Identity = 70/216 (32.41%), Postives = 110/216 (50.93%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESL-----------------------KIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEK 630 GDG GP+I + +V A E + W+E Y G + +T +L E+L+ +R + +KGP+ TP+G G RSLN+ LR+EL+L+ +RP +P R +D +++ RENTE Y+G+E+ V+ L K ++ + + R+ A YA HGR+ V+ +HK NIM+ T+G F E+AEK Sbjct: 27 GDGTGPDIWNAASKVLEAAVEKAYKGEKKITWKEVYAGEKAYNKTGEWLPAETLDVIREYFIAIKGPLTTPVGGGIRSLNVALRQELDLFVCLRPVRYFTGVPSPVKRPEDTDMVIFRENTEDIYAGIEYAKGSEEVQKLISFLQNELNVNKIRFPETSGIGIKPVSEEGTSRLVRAAIDYAIEHGRKSVTLVHKGNIMKFTEGAFKNWGYELAEK 242
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_CORGL (3-isopropylmalate dehydrogenase OS=Corynebacterium glutamicum GN=leuB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.520e-24 Identity = 58/198 (29.29%), Postives = 98/198 (49.49%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKG----PMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDD---VNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 GDGIGPE+ +V +E ++ +G + LT E L S+R + L G P + P G R L L +R L+ + N+RP G ++ + ++ + +RE TEG Y+G + G + + TR + RV YAF A++ R++++ +HK N++ GL+ + EVA++YPE+ Sbjct: 8 GDGIGPEVTAEALKVLNAVRDDIETTDYDLGARRYLKNGELLTDEDLASLREHDAILLGAIGAPGSVPPGILERGLLLKMRFALDHHVNLRPSKLYDGVESPLRNPGKIDFVVVREGTEGAYTGNGGAIRVGTPHEIANETSVNTRYGAERVIRYAFELAQSR-RKKLTLVHKTNVLVHGGGLWQRTVDEVAKEYPEV 204 HSP 2 Score: 48.1358 bits (113), Expect = 1.520e-24 Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 3 Query: 624 REVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN 797 +E P + ID + LV +PS FDV+V NL+GDI++D V GG+GL S N Sbjct: 199 KEYPEVAVDYNHIDAATIYLVTDPSRFDVIVTDNLFGDILTDEAGAVSGGIGLAASGN 256
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_CORGB (3-isopropylmalate dehydrogenase OS=Corynebacterium glutamicum (strain R) GN=leuB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.979e-24 Identity = 57/198 (28.79%), Postives = 97/198 (48.99%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKG----PMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDD---VNLITIRENTEGEYSG----LEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 GDGIGPE+ +V +E ++ +G + LT E L S+R + L G P + P G R L L +R L+ + N+RP G ++ + ++ + +RE TEG Y+G + + + TR + RV YAF A++ R++++ +HK N++ GL+ + EVA++YPE+ Sbjct: 8 GDGIGPEVTAEALKVLNAVRDDIETTDYDLGARRYLKNGELLTDEDLASLREHDAILLGAIGAPGSVPPGILERGLLLKMRFALDHHVNLRPSKLYDGVESPLRNPGKIDFVVVREGTEGAYTGNGGAIRVGTAHEIANETSVNTRYGAERVIRYAFELAQSR-RKKLTLVHKTNVLVHGGGLWQRTVDEVAKEYPEV 204 HSP 2 Score: 47.7506 bits (112), Expect = 1.979e-24 Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 3 Query: 624 REVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN 797 +E P + ID + L+ +PS FDV+V NL+GDI++D V GG+GL S N Sbjct: 199 KEYPEVAVDYNHIDAATIYLITDPSRFDVIVTDNLFGDILTDEAGAVSGGIGLAASGN 256
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_CLAM3 (3-isopropylmalate dehydrogenase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=leuB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.348e-24 Identity = 59/211 (27.96%), Postives = 97/211 (45.97%), Query Frame = 1 Query: 61 ITATLFPGDGIGPEIAESVKQVFRTA---EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKG-----PMATPIGKG--HRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 I+ + PGDGIGPE+ +V R A +V ++ ++ G T LT L ++ ++ L G P + G R L L LR + Y N+RP LPG + +V+ + +RE TEG Y+G + RG + + + T R +AF A R+RV+ +HK N++ L+ + VA ++P++ Sbjct: 5 ISLAVVPGDGIGPEVVHEALRVLREAVPADVSLDTTQYPFGAGHFLETGEILTDSDLAALAQHDAILLGAVGGDPRDARLAGGIIERGLLLKLRFAFDHYINLRPTTLLPGVTSPLASPGEVDFVVVREGTEGPYAGNGGVLRRGTEHEIATEVSVNTAHGVERTVRFAFDLASKRERKRVTLVHKTNVLTFAGSLWQRTVDRVAAEHPDV 215 HSP 2 Score: 54.299 bits (129), Expect = 3.348e-24 Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 3 Query: 627 EVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN-NGEGGLPCL 824 E P + + +D + LV +PS FDV+V NL+GDII+DL A + GG+GL S N N G P + Sbjct: 211 EHPDVAVDYLHVDATMIFLVTDPSRFDVIVSDNLFGDIITDLAAAISGGIGLAASGNVNPTGAFPSM 277
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_ECOLI (Isocitrate dehydrogenase [NADP] OS=Escherichia coli (strain K12) GN=icd PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.343e-24 Identity = 63/211 (29.86%), Postives = 104/211 (49.29%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSF-----LTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLE--------HQVVRGVVE---------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 600 GDGIG ++ ++ +V A E + W E Y G + TQ + L E+L+ +R +V +KGP+ TP+G G RSLN+ LR+EL+LY +RP P + +++ REN+E Y+G+E +V++ + E +K + + + R+ A YA + R+ V+ +HK NIM+ T+G F Sbjct: 34 GDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTG---EKSTQVYGQDVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGAF 241 HSP 2 Score: 43.8986 bits (102), Expect = 4.343e-24 Identity = 19/53 (35.85%), Postives = 30/53 (56.60%), Query Frame = 3 Query: 648 EEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNGE 806 ++V D ++ P+ +DV+ NL GD ISD A +GG+G+ P N G+ Sbjct: 278 KDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGD 330
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_BUCTS (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Thelaxes suberi GN=leuB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.374e-24 Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 3 Query: 648 EEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNGEGG 812 E + IDN M L+KNPS+FDV++ NL+GDIISD CA +IG +GL PS + + G Sbjct: 222 EHMYIDNATMELIKNPSSFDVILCSNLFGDIISDECAAIIGSIGLLPSASLNKSG 276 HSP 2 Score: 64.6994 bits (156), Expect = 7.374e-24 Identity = 57/217 (26.27%), Postives = 101/217 (46.54%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVP----VEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMA-------TPIGKGHRSLNLTLRKELNLYANVRPC------YSLPGYKTRY--DDVNLITIRENTEGEYSGLEHQVVR---GVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHMRKL 657 + PGDGIGPEI + ++ + V+ E+ +G + + LT E++E + L G + I K ++ L LRK NL+AN+RPC + K ++LI IRE T G Y G +++ +I R R+A+ AF A++ ++++ +I KAN++ K+ L+ ++A K+P + + + Sbjct: 10 VLPGDGIGPEIIQEAYKIIDVLQKKFSFNVKMHEYDIGGISIDKHGTALTQETIEGCENSDAILFGSVGGSKWDHLPEIEKPEKAGLLKLRKHFNLFANIRPCKLSQHLLDISPLKNSIIKKGIDLICIRELTGGIYFGKSNKITNIDDPYAFDTEIYFRSEIKRIAKIAFQIAQSR-KKKIVSIDKANVL-KSSILWRDTVNKMAYKFPNVKLEHM 224
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_SACEN (3-isopropylmalate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=leuB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.250e-23 Identity = 56/200 (28.00%), Postives = 92/200 (46.00%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDD---VNLITIRENTEGEYSG----LEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 + PGDGIGPE+ +V E + +G T L L +R++ +G G + P G R L L LR EL+ + N+RP PG K+ D ++++ +RE TEG Y+G L + + I T RV AF A + R+ ++ +HK N++ L+ + EV+ ++P++ Sbjct: 5 VIPGDGIGPEVVAEALKVLGEVVPDTEITRYDLGAARWHATGELLPESVLGELRQHDAILLGAVGDPSVPSGILERGLLLRLRFELDHHVNLRPARLYPGVKSPVSDPGEIDMVVVREGTEGPYAGNGGLLRKDTTHEIATEVSINTAFGVERVVRDAFARAASRPRKHLTLVHKTNVLTHAGSLWSRVVEEVSLQHPDV 204 HSP 2 Score: 49.2914 bits (116), Expect = 1.250e-23 Identity = 22/46 (47.83%), Postives = 31/46 (67.39%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN 797 +D + +V +PS FDV+V NL+GDII+DL + GG+GL S N Sbjct: 211 VDATTIHMVTDPSRFDVIVTDNLFGDIITDLAGAITGGIGLAASGN 256
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_FRASC (3-isopropylmalate dehydrogenase OS=Frankia sp. (strain CcI3) GN=leuB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.627e-23 Identity = 59/199 (29.65%), Postives = 92/199 (46.23%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDD---VNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHM 648 GDGIGPE+ +V R V+ E+ +G T L LE +R + +G G P G R L L LR E + + N+RP PG ++ +++I +RE TEG Y+G + +G V + TR RV AF A R ++ +HK N++ K L+ + EVA ++P++ + Sbjct: 8 GDGIGPEVVAEGLRVLRAVHPKVDTTEYDLGARRWHETGETLPDSVLEELRGHDAILLGAVGDPGVPSGVLERGLLLRLRFEFDHHVNLRPVRLYPGVRSPLAGDPAIDMIVVREGTEGPYAGAGGVLRKGTPHEVATEESLNTRYGVERVVRDAFRRADRRERRHLTLVHKNNVLTKAGDLWSRTVAEVAPEFPDVRV 206 HSP 2 Score: 48.1358 bits (113), Expect = 1.627e-23 Identity = 21/52 (40.38%), Postives = 32/52 (61.54%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNGEGGL 815 +D M V +P FDV+V N++GDI++D+ A + GG+GL S N G+ Sbjct: 211 VDAASMFFVTDPGRFDVVVTDNMFGDILTDIGAAITGGIGLAASGNLDPSGV 262
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_STAES (Isocitrate dehydrogenase [NADP] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=icd PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.271e-23 Identity = 67/206 (32.52%), Postives = 111/206 (53.88%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQ----VVRGVVE-------------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 600 GDGIGP+I ++ +V A E +EW+E G + T +L E+LE+++ + +KGP+ TPIG G RSLN+ LR+EL+L+ +RP +P R +DV+++ RENTE Y+G+E + V+ V++ +K ++++ + R+ A YA + R+ V+ +HK NIM+ T+G F Sbjct: 26 GDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAYDETGEWLPQETLETIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPEDVDMVIFRENTEDIYAGIEFKQGTSEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYALDNNRKSVTLVHKGNIMKFTEGSF 231 The following BLAST results are available for this feature:
BLAST of EY702238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702238 ID=EY702238; Name=EY702238; organism=Citrus sinensis; type=EST; length=907bpback to top |