EY702238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_STAEQ (Isocitrate dehydrogenase [NADP] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=icd PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.271e-23 Identity = 67/206 (32.52%), Postives = 111/206 (53.88%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQ----VVRGVVE-------------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 600 GDGIGP+I ++ +V A E +EW+E G + T +L E+LE+++ + +KGP+ TPIG G RSLN+ LR+EL+L+ +RP +P R +DV+++ RENTE Y+G+E + V+ V++ +K ++++ + R+ A YA + R+ V+ +HK NIM+ T+G F Sbjct: 26 GDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAYDETGEWLPQETLETIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPEDVDMVIFRENTEDIYAGIEFKQGTSEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYALDNNRKSVTLVHKGNIMKFTEGSF 231
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_NOCFA (3-isopropylmalate dehydrogenase OS=Nocardia farcinica GN=leuB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.666e-23 Identity = 57/200 (28.50%), Postives = 92/200 (46.00%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSG----LEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 + PGDGIGPE+ +V VE E+ +G + T L L +R + +G G + P G R L L R EL+ + N+RP G ++ D++ + +RE TEG Y+G + + V + TR RV YAF A+ R+ ++ +HK N++ L+ + EV ++PE+ Sbjct: 5 VIPGDGIGPEVIAEALKVLDVVVPGVEKTEYDLGAKRYHATGEILPDSVLPELREHDAILLGAIGDPSVPSGVLERGLLLRTRFELDHHVNLRPSRLFTGVRSPLAGAPDIDFVVVREGTEGPYTGTGGAIRVRTPHEVATEVSTNTRFGIERVVRYAFAKAQAR-RKHLTLVHKTNVLTFAGSLWQRTVDEVGAEFPEV 203 HSP 2 Score: 51.2174 bits (121), Expect = 4.666e-23 Identity = 28/62 (45.16%), Postives = 35/62 (56.45%), Query Frame = 3 Query: 627 EVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNGEGG 812 E P T ID + +V +P FDV+V NL+GDII+DL A V GG+GL S N G Sbjct: 199 EFPEVTVAYQHIDAATIHMVTDPGRFDVIVTDNLFGDIITDLAAAVSGGIGLAASGNIDASG 260
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_STRAW (3-isopropylmalate dehydrogenase OS=Streptomyces avermitilis GN=leuB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.067e-23 Identity = 55/207 (26.57%), Postives = 97/207 (46.86%), Query Frame = 1 Query: 61 ITATLFPGDGIGPEIAESVKQVFRTA---EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 I + PGDGIG E+ +V A +V +E +E G T LT L++++++ +G G + P G R L LR + + N+RP LPG +T +++ + +RE TEG Y+G + G V + + T RV A+ A+ R++++ +HK N++ L+ +V E++P++ Sbjct: 5 INLAVIPGDGIGQEVVAQGLKVLSAALPSDVKLETKEFDFGARRYHATGETLTDADLDALKQHDAILLGAIGDPSVPSGVLERGFLLKLRFAFDHHVNLRPSKLLPGVETPLAGQPEIDFVVVREGTEGPYTGNGGTIRTGTPHAVATEVSLNTAFGIERVVRDAYARAQARPRKKLALVHKNNVLVHAGHLWTDIFNKVGEEFPDV 211 HSP 2 Score: 54.6842 bits (130), Expect = 6.067e-23 Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 3 Query: 627 EVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN-NGEGGLPCL 824 E P T E + +D + LV P FDV+V NL+GDII+DL A + GG+G+ S N N G P + Sbjct: 207 EFPDVTTEYMHVDAATIYLVTQPERFDVIVTDNLFGDIITDLAAAISGGIGVAASGNINPSGAYPSM 273
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_BIFLO (3-isopropylmalate dehydrogenase OS=Bifidobacterium longum GN=leuB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.897e-23 Identity = 60/203 (29.56%), Postives = 92/203 (45.32%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVPV---EWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKG---HRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 + PGDGIG E+ ++ A V E+E +G E R + L + E ++ N L G + P K R L L LR +L+ Y N+RP G + D++ + +RE TEG Y G V R V + I T RV YAF A ++ V+ +HK N++ ++ + +V E+YPE+ Sbjct: 9 VIPGDGIGKEVTPWAQKALEKAAEGVADFEYENFDLGAERYLRDGAILPEDEEERIKANDAILLGAVGDPRIKAGILERGLLLKLRFDLDQYVNLRPSKLYKGVTSPLANPGDIDFVVVREGTEGLYCGAGGAVRRNTPQEVATEVSINTAYGVERVVRYAFKLAMKR-KKHVTLVHKKNVLVNAGDMWQRIVDKVGEEYPEV 210 HSP 2 Score: 51.2174 bits (121), Expect = 7.897e-23 Identity = 26/67 (38.81%), Postives = 39/67 (58.21%), Query Frame = 3 Query: 627 EVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPS-CNNGEGGLPCL 824 E P T++ ID + LV +PS FDV++ NL+GDI++D V+GG+G + S C N P + Sbjct: 206 EYPEVTHDYQHIDAATIFLVSDPSRFDVILTDNLFGDILTDEAGSVVGGVGYSASGCINASDEFPSM 272
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_BIFLD (3-isopropylmalate dehydrogenase OS=Bifidobacterium longum (strain DJO10A) GN=leuB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.897e-23 Identity = 60/203 (29.56%), Postives = 92/203 (45.32%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVPV---EWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKG---HRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 + PGDGIG E+ ++ A V E+E +G E R + L + E ++ N L G + P K R L L LR +L+ Y N+RP G + D++ + +RE TEG Y G V R V + I T RV YAF A ++ V+ +HK N++ ++ + +V E+YPE+ Sbjct: 9 VIPGDGIGKEVTPWAQKALEKAAEGVADFEYENFDLGAERYLRDGAILPEDEEERIKANDAILLGAVGDPRIKAGILERGLLLKLRFDLDQYVNLRPSKLYKGVTSPLANPGDIDFVVVREGTEGLYCGAGGAVRRNTPQEVATEVSINTAYGVERVVRYAFKLAMKR-KKHVTLVHKKNVLVNAGDMWQRIVDKVGEEYPEV 210 HSP 2 Score: 51.2174 bits (121), Expect = 7.897e-23 Identity = 26/67 (38.81%), Postives = 39/67 (58.21%), Query Frame = 3 Query: 627 EVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPS-CNNGEGGLPCL 824 E P T++ ID + LV +PS FDV++ NL+GDI++D V+GG+G + S C N P + Sbjct: 206 EYPEVTHDYQHIDAATIFLVSDPSRFDVILTDNLFGDILTDEAGSVVGGVGYSASGCINASDEFPSM 272
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_MYCLE (3-isopropylmalate dehydrogenase OS=Mycobacterium leprae GN=leuB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.900e-23 Identity = 56/199 (28.14%), Postives = 92/199 (46.23%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHM 648 GDGIGPE+ ++ V+ + +G T L L +R + +G G + P G R L L LR EL+ + N+RP PG + D++ + +RE TEG Y+G + G V + + T RV + AF A+ R+ ++ +HK N++ L+ + +EV EKYP++ + Sbjct: 8 GDGIGPEVVAQAVKILDVVLPGVQKTTYDLGARRYHTTGELLPESVLAELREHDAILLGAVGDPSVPSGVLERGLLLRLRFELDHHINLRPARLYPGVNSLLAGKPDIDFVVVREGTEGPYTGTGGAIRVGTPNEVATEVSVNTAFGVRRVVQDAFERARQR-RKHLTLVHKNNVLTYAGTLWCRIVQEVGEKYPDVEV 205 HSP 2 Score: 50.447 bits (119), Expect = 7.900e-23 Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN 797 ID + LV PS FDV+V NL+GDII+DL A V GG+ L S N Sbjct: 210 IDAATIYLVTEPSRFDVIVTDNLFGDIITDLAAAVCGGIALAASGN 255
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_MYCLB (3-isopropylmalate dehydrogenase OS=Mycobacterium leprae (strain Br4923) GN=leuB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.900e-23 Identity = 56/199 (28.14%), Postives = 92/199 (46.23%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHM 648 GDGIGPE+ ++ V+ + +G T L L +R + +G G + P G R L L LR EL+ + N+RP PG + D++ + +RE TEG Y+G + G V + + T RV + AF A+ R+ ++ +HK N++ L+ + +EV EKYP++ + Sbjct: 8 GDGIGPEVVAQAVKILDVVLPGVQKTTYDLGARRYHTTGELLPESVLAELREHDAILLGAVGDPSVPSGVLERGLLLRLRFELDHHINLRPARLYPGVNSLLAGKPDIDFVVVREGTEGPYTGTGGAIRVGTPNEVATEVSVNTAFGVRRVVQDAFERARQR-RKHLTLVHKNNVLTYAGTLWCRIVQEVGEKYPDVEV 205 HSP 2 Score: 50.447 bits (119), Expect = 7.900e-23 Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN 797 ID + LV PS FDV+V NL+GDII+DL A V GG+ L S N Sbjct: 210 IDAATIYLVTEPSRFDVIVTDNLFGDIITDLAAAVCGGIALAASGN 255
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_FRASN (3-isopropylmalate dehydrogenase OS=Frankia sp. (strain EAN1pec) GN=leuB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.337e-22 Identity = 58/197 (29.44%), Postives = 89/197 (45.18%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRGVVESL----KIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 GDGIGPE+ +V R VE ++ +G T L L +R + +G G P G R L L LR EL+ + N+RP PG + +++I +RE TEG Y+G + RG + + + TR RV AF A R ++ +HK N++ K L+ + EV ++P + Sbjct: 8 GDGIGPEVVAEGLRVLRAVHPKVETTDYDLGARRWHETGETLPDSVLAELRGHDAILLGAVGDPGVPSGVLERGLLLRLRFELDHHVNLRPVRLYPGVTSPLAGDPAIDMIVVREGTEGPYAGAGGTLRRGTPQEVATEESLNTRFGVERVVRDAFARASRRPRAHLTLVHKTNVLTKAGDLWARTVAEVGAEFPAV 204 HSP 2 Score: 48.521 bits (114), Expect = 1.337e-22 Identity = 23/62 (37.10%), Postives = 36/62 (58.06%), Query Frame = 3 Query: 627 EVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCNNGEGG 812 E P + + +D M V +P+ FDV+V N++GDI++D+ A + GG+GL S N G Sbjct: 200 EFPAVSVDYQHVDAASMFFVTDPARFDVVVTDNMFGDILTDIGAAITGGIGLAASGNLDPSG 261
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_STAAW (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain MW2) GN=icd PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.472e-22 Identity = 66/206 (32.04%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQ----VVRGVVE-------------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 600 GDGIGP+I ++ +V A E +EW+E G + T +L E+L++++ + +KGP+ TPIG G RSLN+ LR+EL+L+ +RP +P R DV+++ RENTE Y+G+E + V+ V++ +K ++++ + R+ A YA + R+ V+ +HK NIM+ T+G F Sbjct: 26 GDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTTEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVHKGNIMKFTEGSF 231
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_STAAS (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain MSSA476) GN=icd PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.472e-22 Identity = 66/206 (32.04%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQ----VVRGVVE-------------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 600 GDGIGP+I ++ +V A E +EW+E G + T +L E+L++++ + +KGP+ TPIG G RSLN+ LR+EL+L+ +RP +P R DV+++ RENTE Y+G+E + V+ V++ +K ++++ + R+ A YA + R+ V+ +HK NIM+ T+G F Sbjct: 26 GDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTTEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVHKGNIMKFTEGSF 231 The following BLAST results are available for this feature:
BLAST of EY702238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702238 ID=EY702238; Name=EY702238; organism=Citrus sinensis; type=EST; length=907bpback to top |