EY702238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_STAAR (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain MRSA252) GN=icd PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.472e-22 Identity = 66/206 (32.04%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQ----VVRGVVE-------------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 600 GDGIGP+I ++ +V A E +EW+E G + T +L E+L++++ + +KGP+ TPIG G RSLN+ LR+EL+L+ +RP +P R DV+++ RENTE Y+G+E + V+ V++ +K ++++ + R+ A YA + R+ V+ +HK NIM+ T+G F Sbjct: 26 GDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTTEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVHKGNIMKFTEGSF 231
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_STAAN (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain N315) GN=icd PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.472e-22 Identity = 66/206 (32.04%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQ----VVRGVVE-------------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 600 GDGIGP+I ++ +V A E +EW+E G + T +L E+L++++ + +KGP+ TPIG G RSLN+ LR+EL+L+ +RP +P R DV+++ RENTE Y+G+E + V+ V++ +K ++++ + R+ A YA + R+ V+ +HK NIM+ T+G F Sbjct: 26 GDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTTEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVHKGNIMKFTEGSF 231
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_STAAM (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=icd PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.472e-22 Identity = 66/206 (32.04%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQ----VVRGVVE-------------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 600 GDGIGP+I ++ +V A E +EW+E G + T +L E+L++++ + +KGP+ TPIG G RSLN+ LR+EL+L+ +RP +P R DV+++ RENTE Y+G+E + V+ V++ +K ++++ + R+ A YA + R+ V+ +HK NIM+ T+G F Sbjct: 26 GDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTTEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVHKGNIMKFTEGSF 231
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_STAAC (Isocitrate dehydrogenase [NADP] OS=Staphylococcus aureus (strain COL) GN=icd PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.472e-22 Identity = 66/206 (32.04%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQ----VVRGVVE-------------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 600 GDGIGP+I ++ +V A E +EW+E G + T +L E+L++++ + +KGP+ TPIG G RSLN+ LR+EL+L+ +RP +P R DV+++ RENTE Y+G+E + V+ V++ +K ++++ + R+ A YA + R+ V+ +HK NIM+ T+G F Sbjct: 26 GDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTTEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVHKGNIMKFTEGSF 231
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: IDH_CALNO (Isocitrate dehydrogenase [NADP] OS=Caldococcus noboribetus GN=icd PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.923e-22 Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 1 Query: 76 FPGDGIGPEIAESVKQVFRTAEVP-------VEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC--YSLPGYKTRYDDVNLITIRENTEGEYSGL-------EHQVVRGVVE-------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 600 F GDGIGPEI ES K+V A + W E G E S L +L++ + +V LKGP+ TP+G G RSLN+TLR L+LY+NVRP Y P ++++ + RENTE Y+G+ E Q +R ++ +K I++ + R A +A +G + V+ +HK NIM+ T+G F Sbjct: 38 FKGDGIGPEIVESAKKVLDAAVDKAYGGTRRIVWWEVTAGEEAQKECGSLLPDGTLQAFKLARVNLKGPLTTPVGGGFRSLNVTLRMVLDLYSNVRPVKWYGQPTPHCHPENIDWVIFRENTEDVYAGIEWPFDSPEAQKIRDFLKKEFGIELTPDTGIGIKPISKWRTQRHVRRAMEWAIRNGYKHVTIMHKGNIMKYTEGAF 241
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_MYCGI (3-isopropylmalate dehydrogenase OS=Mycobacterium gilvum (strain PYR-GCK) GN=leuB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.264e-22 Identity = 55/199 (27.64%), Postives = 96/199 (48.24%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHM 648 GDGIGPE+ +V VE E+ +G + RT L L+ ++ + +G G + P G R L L +R EL+ + N+RP PG ++ +++ + +RE TEG Y+G + G + + + T RV + AF A+ R+ ++ +HK N++ L+ + + VA +YPE+ + Sbjct: 8 GDGIGPEVIGEALRVLDAVVPGVEKTEYDLGARLYHRTGEVLPDSVLDELKGHDAILLGAIGDPSMPSGVLERGLLLRIRFELDHHINLRPGRLYPGVQSPLAGNPEIDFVVVREGTEGPYTGNGGAIRVGTPHEIATEVSVNTAYGVRRVVQDAFKRAQQR-RKHLTLVHKNNVLTNAGSLWWRTVQAVAAEYPEVEV 205 HSP 2 Score: 50.0618 bits (118), Expect = 2.264e-22 Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN 797 +D + +V +P FDV+V NL+GDII+DL A V GG+GL S N Sbjct: 210 VDAATIHMVTDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGN 255
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_STRGG (3-isopropylmalate dehydrogenase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=leuB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.982e-22 Identity = 57/207 (27.54%), Postives = 95/207 (45.89%), Query Frame = 1 Query: 61 ITATLFPGDGIGPEIAESVKQVFRTA---EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 I + PGDGIG E+ +V +V +E +E+ +G + RT L LE+++ + +G G + P G R L L LR + + N+RP P T D++ + +RE TEG Y+G + G V + + T RV AF A R++++ +HK N++ L+ +VA +YP++ Sbjct: 5 IDLAVIPGDGIGQEVVAQGLKVLNAVLPQDVKLETKEYDLGAQRWHRTGDTLPDAELEALKGHDAILLGAIGDPSVPSGVLERGLLLKLRFAFDHFINLRPSKLFPNTATPLAGRPDIDFVVVREGTEGPYTGNGGSLRTGTPAEVATEVSLNTAYGVERVVRDAFERAAARPRKKLTLVHKNNVLVYAGHLWKNTFDKVAAEYPQV 211 HSP 2 Score: 51.6026 bits (122), Expect = 4.982e-22 Identity = 27/67 (40.30%), Postives = 38/67 (56.72%), Query Frame = 3 Query: 627 EVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN-NGEGGLPCL 824 E P + + + +D + V P FDV+V NL+GDI++DL A V GG+GL S N N G P + Sbjct: 207 EYPQVSTDYLHVDAATIFFVTQPERFDVIVTDNLFGDILTDLAAAVSGGIGLAASGNINPTGAFPSM 273
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_BIFLI (3-isopropylmalate dehydrogenase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=leuB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.984e-22 Identity = 59/203 (29.06%), Postives = 91/203 (44.83%), Query Frame = 1 Query: 73 LFPGDGIGPEIAESVKQVFRTAEVPV---EWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKG---HRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 + PGDGIG E+ ++ A V E+E +G E R + L + ++ N L G + P K R L L LR +L+ Y N+RP G + D++ + +RE TEG Y G V R V + I T RV YAF A ++ V+ +HK N++ ++ + +V E+YPE+ Sbjct: 9 VIPGDGIGKEVTPWAQKALEKAAEGVADFEYENFDLGAERYLRDGAILPEDEEGRIKANDAILLGAVGDPRIKAGILERGLLLKLRFDLDQYVNLRPSKLYKGVTSPLANPGDIDFVVVREGTEGLYCGAGGAVRRNTPQEVATEVSINTAYGVERVVRYAFKLAMKR-KKHVTLVHKKNVLVNAGDMWQRIVDKVGEEYPEV 210 HSP 2 Score: 51.2174 bits (121), Expect = 4.984e-22 Identity = 26/67 (38.81%), Postives = 39/67 (58.21%), Query Frame = 3 Query: 627 EVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPS-CNNGEGGLPCL 824 E P T++ ID + LV +PS FDV++ NL+GDI++D V+GG+G + S C N P + Sbjct: 206 EYPEVTHDYQHIDAATIFLVSDPSRFDVILTDNLFGDILTDEAGSVVGGVGYSASGCINASDEFPSM 272
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_CORDI (3-isopropylmalate dehydrogenase OS=Corynebacterium diphtheriae GN=leuB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.438e-22 Identity = 55/198 (27.78%), Postives = 87/198 (43.94%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKG----PMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSG----LEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 642 GDGIGPE+ +V +E ++ +G R L L S+R + L G P P G R L L +R L+ + N+RP P + D++ + +RE TEG Y G L + + TR RV AF A+ ++ ++ +HK N++ GL+ + E+A +YPE+ Sbjct: 8 GDGIGPEVTAEALKVLNAVRDDIEVTDYDLGARRYLRNGELLADADLVSLREHDAILLGAIGAPGEVPPGVLERGLLLKMRFALDHHVNLRPSKLYPTATSPLANPGDIDFVVVREGTEGLYCGNGGTLREGTPHEIASEVSQNTRYGVERVVRDAFERAQNR-KKHLTLVHKTNVLVNAGGLWQRTVNEIATEYPEV 204 HSP 2 Score: 50.447 bits (119), Expect = 8.438e-22 Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 627 EVP*DTYEEVXIDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN 797 E P T + ID + +V +PS +DV+V NL+GDI++DL V GG+GL S N Sbjct: 200 EYPEVTVDYNHIDAATIYMVTDPSRYDVIVTDNLFGDILTDLAGAVTGGIGLAASGN 256
BLAST of EY702238 vs. ExPASy Swiss-Prot
Match: LEU3_MYCUA (3-isopropylmalate dehydrogenase OS=Mycobacterium ulcerans (strain Agy99) GN=leuB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.098e-21 Identity = 53/202 (26.24%), Postives = 91/202 (45.05%), Query Frame = 1 Query: 82 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY------DDVNLITIRENTEGEYSG----LEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIHM 648 GDGIGPE+ ++ + VE + +G T L + +R + +G G + P G R L L LR EL+ + N+RP PG K+ +++ + +RE TEG Y+G + V + + T RV AF A R+ ++ +HK N++ L+ + +E+ E+YP++ + Sbjct: 8 GDGIGPEVVAQAVKILDVVQPGVEKTNYDLGARRFHATGEILPDSVIAELREHDAILLGAIGDPSVPSGVLERGLLLRLRFELDYHINLRPGRLYPGVKSPLALEPGNPEIDFVVVREGTEGPYTGNGGAIRVGTANEVATEVSVNTAFGVRRVVRDAFERAMRR-RKHLTLVHKNNVLTFAGSLWWRTVQEIGEEYPDVEL 208 HSP 2 Score: 50.0618 bits (118), Expect = 1.098e-21 Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 3 Query: 660 IDNCCMMLVKNPSAFDVLVMPNLYGDIISDLCAGVIGGLGLTPSCN 797 +D + +V +P FDV+V NL+GDII+DL A V GG+GL S N Sbjct: 213 VDAATIHMVTDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGN 258 The following BLAST results are available for this feature:
BLAST of EY702238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702238 ID=EY702238; Name=EY702238; organism=Citrus sinensis; type=EST; length=907bpback to top |