EY702234

Overview
NameEY702234
Unique NameEY702234
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CABP8_MOUSE (Calcium-binding protein 8 OS=Mus musculus GN=Caln1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.155e-13
Identity = 39/125 (31.20%), Postives = 75/125 (60.00%), Query Frame = 3
Query:  117 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEE-----ELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMI 473
            +++ E +EAF + D+DG+G I+ +ELG  MRSLG  P+E EL  ++  +D DG+G +DF EF+ ++  K+  ++  +      +   F  FD  +   ++  EL+H++ +   + LT ++++ +I
Sbjct:   36 EELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQR---VTLEELKHILYHAFRDHLTMKDIENII 157          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: MLRS_CHICK (Myosin regulatory light chain 2, skeletal muscle isoform OS=Gallus gallus GN=MYLPF PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.509e-13
Identity = 47/151 (31.13%), Postives = 73/151 (48.34%), Query Frame = 3
Query:   84 GRRKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 533
            G   +       QI EFKEAF++ D++ DG I   +L     ++G+ N    EL  MI E     +G I+F  FL +   K+K  D E+ +  AF+V D D  G I  + L  ++T   ++ T EE+  M      D  G ++Y+    V+
Sbjct:   13 GSSNVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAFPPDVAGNVDYKNICYVI 159          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: MLR1_CAEEL (Myosin regulatory light chain 1 OS=Caenorhabditis elegans GN=mlc-1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.509e-13
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 3
Query:   72 EKTNGRRKMADQLTDDQ--ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 533
            +K++ +R  ++    DQ  I EFKEAF + D++ DG I   +L  +  S+GQ   ++++  MI E     +G I+F  FL L   ++  TD E  +  AF +FDK   G I   +L  ++ N  GE L ++EV  M +       G+++Y+ F  ++
Sbjct:    7 KKSSKKRSGSEAAQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKE----ASGPINFTVFLTLFGERLTGTDPEATIIGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMYKGKPPIEGGEVDYKAFAHLI 159          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAFK (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.509e-13
Identity = 41/151 (27.15%), Postives = 81/151 (53.64%), Query Frame = 3
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM--TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            +A  L D +I+  +  F   D D  G ++++E+   ++ +G      ++  ++ ++D++ +G I + +FL     K      E  L   F+ FD D NG IS  EL+ +    ++   L D+ +D +++E D++GDG+I++ EF+ +M  K
Sbjct:  363 IAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIP-FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 512          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CANB1_DICDI (Calcineurin subunit B type 1 OS=Dictyostelium discoideum GN=cnbA PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.509e-13
Identity = 53/161 (32.92%), Postives = 86/161 (53.42%), Query Frame = 3
Query:   90 RKMADQLTDDQISEFKEA--------FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 533
            ++  +Q+ D+  S F EA        F + DKDG G +TT E  ++   L  NP    L+ +I   D + +  I+F EF+  +A        E++LK  F+++D D +GFIS  EL  V+     TNL +    + VD+ I E D D DG+I+++EF+ ++
Sbjct:   10 KEQLEQMKDN--SSFSEAELKKLYRRFQMLDKDGSGTLTTDEFLSIP-DLALNPL---LERVIQIFDQNKDNEIEFFEFVGTLATLSHKGTKEDKLKFLFQIYDIDCDGFISNGELFQVLKMMVGTNLNDVQLQQIVDKTIIEGDYDKDGKISFDEFIHMI 164          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: MLRS_BOVIN (Myosin regulatory light chain 2, skeletal muscle isoform OS=Bos taurus GN=MYLPF PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.361e-13
Identity = 45/151 (29.80%), Postives = 74/151 (49.01%), Query Frame = 3
Query:   84 GRRKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 533
            G   +       QI EFKEAF++ D++ DG I  ++L     ++G+ N    EL  M+ E     +G I+F  FLN+   K+K  D E+ +  AF+V D +  G I    L  ++T   ++ + EE+  M      D  G ++Y+    V+
Sbjct:   15 GSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SGPINFTVFLNMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVI 161          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.390e-13
Identity = 52/174 (29.89%), Postives = 87/174 (50.00%), Query Frame = 3
Query:   69 VEKTNGRRKMADQLTDDQISE-------FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK----------DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 533
            +E  N ++K++ Q +  ++             F LFDK+ DG IT +EL   +  LG +   ++L+  ++         + F +F  L     +          D   E +L+EAF VFD+D +GFISA EL+ V+  LG  E    E+V++MI   D + DG++++ EF  +M
Sbjct:    1 MEINNEKKKLSRQSSSFRLRSPSLNALRLHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDDFAALHKTLDESFFGGEGSCCDGSPESDLEEAFNVFDEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEFKNMM 174          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.390e-13
Identity = 44/141 (31.21%), Postives = 78/141 (55.32%), Query Frame = 3
Query:  114 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEE-ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 533
            +D+  E +  FS  D + DG I+ +EL     +LG+  ++ E    +   D DG+G +DF EF  L+  K+ D + ++ ELK AFR++  +    I+   L+ ++  LGE  T ++   MI   D++ DG ++++EF  +M
Sbjct:   38 EDKNRELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI--KVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNADGVLSFDEFALMM 176          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: FIMB_DICDI (Fimbrin OS=Dictyostelium discoideum GN=fimA PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.733e-13
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  111 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 320
            ++ +ISEFK +F+ FD++GDG I+  EL  ++   G+  T  E++DMI EVD DGNG+IDF EFL +M +
Sbjct:    5 SESEISEFKASFNQFDENGDGQISALELQKILTKCGEKVTGVEVRDMIKEVDTDGNGSIDFKEFLQVMQK 74          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CML32_ORYSJ (Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica GN=CML32 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.733e-13
Identity = 51/154 (33.12%), Postives = 78/154 (50.65%), Query Frame = 3
Query:  135 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT-------------------DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 533
            +  F LFD++GDG IT  EL   + +LG       L   ++    +G   + F +F + + R + D                    D EEE++EAF+VFD D +GFISA+EL+ V+  LG  E  +   V EMI   D + DG++++ EF  +M
Sbjct:   36 RRVFDLFDRNGDGEITVDELAQALDALGLVADRDGLAATVSAYVPEGAAGLRFEDF-DALHRALGDALFGSLDGAAAAGEPGGGGGDEEEEMREAFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMM 188          
The following BLAST results are available for this feature:
BLAST of EY702234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
CABP8_MOUSE1.155e-1331.20Calcium-binding protein 8 OS=Mus musculus GN=Caln1... [more]
MLRS_CHICK1.509e-1331.13Myosin regulatory light chain 2, skeletal muscle i... [more]
MLR1_CAEEL1.509e-1331.21Myosin regulatory light chain 1 OS=Caenorhabditis ... [more]
CDPK2_PLAFK1.509e-1327.15Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
CANB1_DICDI1.509e-1332.92Calcineurin subunit B type 1 OS=Dictyostelium disc... [more]
MLRS_BOVIN3.361e-1329.80Myosin regulatory light chain 2, skeletal muscle i... [more]
CML43_ARATH4.390e-1329.89Probable calcium-binding protein CML43 OS=Arabidop... [more]
CML38_ARATH4.390e-1331.21Calcium-binding protein CML38 OS=Arabidopsis thali... [more]
FIMB_DICDI5.733e-1348.57Fimbrin OS=Dictyostelium discoideum GN=fimA PE=2 S... [more]
CML32_ORYSJ5.733e-1333.12Probable calcium-binding protein CML32 OS=Oryza sa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-E10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702234 ID=EY702234; Name=EY702234; organism=Citrus sinensis; type=EST; length=866bp
TTTCGCGACCCACGCGTCCGAGCTCTTGTTTTCTTGTAAGGAAAAAATAA
ATAAATACCTATTTCTGAGTTGAAAAAACAAACGGAAGAAGAAAAATGGC
GGATCAGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGCCTTCAGCT
TGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACT
GTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACAT
GATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAAT
TCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAG
CTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTC
AGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTG
ATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGC
CAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAGTAATGACC
CCAACCCACCAATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTC
CTAGTTTTCTCTTTTACAATTTTTAATTTGATAGTCATGAGGGTCAGGCT
AAAGGAAGCAATGGTCTTTTAATGGTGATGGGCCTGATGGTGTAGGAAGA
ATGTTGTCTCCCTCGTCAATATGTCTTGTGACTCGCAAAACTTTTCGGTT
TTTATTATTTTTAGTGTTCTGCTGTTCTATGAATGTTGTTGTCTGTTTAA
TGTGTTTCATTAATTTCTGCCCTTGCGATGNTTATTTTTCTTTTGGGCGA
ATATGTATCCTATTTT
back to top