EY702234

Overview
NameEY702234
Unique NameEY702234
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: EFH51_TRYCR (EF-hand protein 5 variant 1 OS=Trypanosoma cruzi PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11
Identity = 39/126 (30.95%), Postives = 75/126 (59.52%), Query Frame = 3
Query:  177 ITTKELGTVMRSLGQNPTEAELQD---MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD-GDGQINYEEFVKVMMAK 542
            I +K++  +M+++G + TE E  D   +I + +      + F +FL LM R++ DT ++E L+ AF  +DK + G+++  +   +   LGE+ T EE++E++  A+VD  D +I+Y  FV  + ++
Sbjct:   80 IPSKDVYALMQNVGMHLTEEEFHDALRVIGQSEPQNADELSFSDFLLLMTREVDDTMADE-LRSAFFHYDKYKTGYVTRKQFTELFATLGERSTPEELEELLAVAEVDETDDKIDYNRFVNELTSR 204          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: EFCB2_HUMAN (EF-hand calcium-binding domain-containing protein 2 OS=Homo sapiens GN=EFCAB2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.109e-11
Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = 3
Query:  129 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGTIDFPEFLNLMARKMKDTD----SEEELKEAFRVFDKDQNGFISAAELRHVMT 428
            + KEAF +FD + +  +  +E+GT++RSLG  PTE EL D+I EV + +  G I F +FL +M   + +       E+ L  AF V D  + GF++  EL   MT
Sbjct:  154 KIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMT 258          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CN143_RAT (EF-hand domain-containing protein C14orf143 homolog OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.109e-11
Identity = 38/151 (25.17%), Postives = 74/151 (49.01%), Query Frame = 3
Query:   84 GRRKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 533
            G R  A +++  +  ++ E F   D+D  G ++ ++    +  L G  P++ E   +++  + D +G +    FLN++ RK +      E++  F  FD    GF++  + +   + +  KL    V E+ READ D DG +++ +F   M
Sbjct:    7 GARPRAGEISASERRKWVEVFKACDEDNKGYLSREDFKVAIVMLFGYKPSKIEADAVMSSANPDTSG-VSLEGFLNVVQRKKEAQLYRNEIRHIFTAFDVHYRGFLTLEDFKRAFSQVAPKLPSRTVLEVFREADQDSDGHVSFRDFEYAM 156          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 35/126 (27.78%), Postives = 70/126 (55.56%), Query Frame = 3
Query:  144 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 521
            F   D + DG I   +L   ++ LG + TE EL+ ++   D D +G +DF EF++ +       D E++L+  F+  DK  +G I A E+   + +LG  +++++ +++++  D +G   I++ E+
Sbjct:   65 FQELDVNKDGAICINDLAVGLKRLGVHRTELELRKIVKAGDKDQDGQLDFDEFVHYL------RDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVNISEQQAEKILKSMDKNGTMTIDWNEW 184          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: EFH52_TRYCR (EF-hand protein 5 variant 2 OS=Trypanosoma cruzi PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 38/126 (30.16%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  177 ITTKELGTVMRSLGQNPTEAELQD---MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD-GDGQINYEEFVKVMMAK 542
            I +K++  +M+++G + TE E  D   +I + +      + F +FL LM R++ DT ++E L+ AF  +DK + G+++  +   +   L E+ T EE++E++  A+VD  D +I+Y  FV  + ++
Sbjct:   80 IPSKDVYALMQNVGMHLTEEEFHDALRVIGQSEPQNADELSFSDFLLLMTREVDDTMADE-LRSAFFHYDKHKTGYVTRKQFTELFATLAERSTPEELEELLAVAEVDETDDKIDYNRFVNELTSR 204          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CDPKI_ARATH (Calcium-dependent protein kinase 18 OS=Arabidopsis thaliana GN=CPK18 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 43/154 (27.92%), Postives = 86/154 (55.84%), Query Frame = 3
Query:   90 RKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTIDFPEFL--NLMARKMKDTDSE---EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 533
            R +A  + +D++ + ++ F   D D +G I+ +E+   + + +     +A + +++   D++ +G +DF EF+   L   ++++ DSE   +  + AF  FD D +GFI+  ELR + T L        ++ ++ EADVD DG+I+  EF +++
Sbjct:  365 RALAKTINEDELDDLRDQFDAIDIDKNGSISLEEMRQALAKDVPWKLKDARVAEILQANDSNTDGLVDFTEFVVAALHVNQLEEHDSEKWQQRSRAAFDKFDIDGDGFITPEELR-LQTGL-----KGSIEPLLEEADVDEDGRISINEFRRLL 512          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: MLC1_DROPS (Myosin light chain alkali OS=Drosophila pseudoobscura pseudoobscura GN=Mlc1 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 43/144 (29.86%), Postives = 75/144 (52.08%), Query Frame = 3
Query:  120 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA--RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQINYEEFVKVMMA 539
            +I   +  F +    G+G I   +LG  +R+L  NPT A ++ M           I   EFL + +  +K K+    E+  E  +++DK++NG +  AEL+H +  LGE L DE+V+ +  +     D +G I Y +F++ +M+
Sbjct:    8 EIENVEFVFEVMGSAGEG-IDAVDLGDALRALNLNPTLALIEKM-GGTKKRNEKKIKMDEFLPIYSQVKKEKEQGCYEDFIECLKLYDKEENGTMMLAELQHALLALGESLDDEQVETLFADCMDPEDDEGLIPYSQFIQRLMS 149          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: ACTN2_HUMAN (Alpha-actinin-2 OS=Homo sapiens GN=ACTN2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 35/106 (33.02%), Postives = 64/106 (60.38%), Query Frame = 3
Query:   99 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 416
            A  +T +Q++EF+ +F+ FD+  +G +  ++    + S+G +  EAE   ++  VD +G GT+ F  F++ M R+  DTD+ E++  +FR+   D+  +I A ELR
Sbjct:  747 AKGITQEQMNEFRASFNHFDRRKNGLMDHEDFRACLISMGYDLGEAEFARIMTLVDPNGQGTVTFQSFIDFMTRETADTDTAEQVIASFRILASDK-PYILAEELR 851          
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: ACTN2_BOVIN (Alpha-actinin-2 OS=Bos taurus GN=ACTN2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 35/106 (33.02%), Postives = 64/106 (60.38%), Query Frame = 3
Query:   99 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 416
            A  +T +Q++EF+ +F+ FD+  +G +  ++    + S+G +  EAE   ++  VD +G GT+ F  F++ M R+  DTD+ E++  +FR+   D+  +I A ELR
Sbjct:  747 AKGITQEQMNEFRASFNHFDRRKNGLMDHEDFRACLISMGYDLGEAEFARIMTLVDPNGQGTVTFQSFIDFMTRETADTDTAEQVIASFRILASDK-PYILAEELR 851          
The following BLAST results are available for this feature:
BLAST of EY702234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
EFH51_TRYCR1.844e-1130.95EF-hand protein 5 variant 1 OS=Trypanosoma cruzi P... [more]
EFCB2_HUMAN4.109e-1138.10EF-hand calcium-binding domain-containing protein ... [more]
CN143_RAT4.109e-1125.17EF-hand domain-containing protein C14orf143 homolo... [more]
SCMC2_XENLA5.366e-1127.78Calcium-binding mitochondrial carrier protein SCaM... [more]
EFH52_TRYCR5.366e-1130.16EF-hand protein 5 variant 2 OS=Trypanosoma cruzi P... [more]
CDPKI_ARATH5.366e-1127.92Calcium-dependent protein kinase 18 OS=Arabidopsis... [more]
MLC1_DROPS7.008e-1129.86Myosin light chain alkali OS=Drosophila pseudoobsc... [more]
ACTN2_HUMAN7.008e-1133.02Alpha-actinin-2 OS=Homo sapiens GN=ACTN2 PE=1 SV=1[more]
ACTN2_BOVIN7.008e-1133.02Alpha-actinin-2 OS=Bos taurus GN=ACTN2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-E10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702234 ID=EY702234; Name=EY702234; organism=Citrus sinensis; type=EST; length=866bp
TTTCGCGACCCACGCGTCCGAGCTCTTGTTTTCTTGTAAGGAAAAAATAA
ATAAATACCTATTTCTGAGTTGAAAAAACAAACGGAAGAAGAAAAATGGC
GGATCAGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGCCTTCAGCT
TGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACT
GTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACAT
GATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAAT
TCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAG
CTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTC
AGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTG
ATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGC
CAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAGTAATGACC
CCAACCCACCAATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTC
CTAGTTTTCTCTTTTACAATTTTTAATTTGATAGTCATGAGGGTCAGGCT
AAAGGAAGCAATGGTCTTTTAATGGTGATGGGCCTGATGGTGTAGGAAGA
ATGTTGTCTCCCTCGTCAATATGTCTTGTGACTCGCAAAACTTTTCGGTT
TTTATTATTTTTAGTGTTCTGCTGTTCTATGAATGTTGTTGTCTGTTTAA
TGTGTTTCATTAATTTCTGCCCTTGCGATGNTTATTTTTCTTTTGGGCGA
ATATGTATCCTATTTT
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