EY702234

Overview
NameEY702234
Unique NameEY702234
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702234_ssr45 microsatellite EY702234_ssr45:45..56. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2673 contig Csv1_Contig2673:523..1388. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 271.937 bits (694), Expect = 3.196e-72
Identity = 134/149 (89.93%), Postives = 144/149 (96.64%), Query Frame = 3 
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDG INYEEFV++MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMMMAK 149
[Close]
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CALM_PAXIN (Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3)

HSP 1 Score: 271.166 bits (692), Expect = 5.451e-72
Identity = 132/149 (88.59%), Postives = 144/149 (96.64%), Query Frame = 3 
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            MADQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTE ELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINY+EFVK+M++K
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDEFVKMMLSK 149
[Close]
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 7.119e-72
Identity = 134/149 (89.93%), Postives = 143/149 (95.97%), Query Frame = 3 
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            MAD LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG INYEEFV++MMAK
Sbjct:    1 MADNLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMMMAK 149
[Close]
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 7.119e-72
Identity = 132/149 (88.59%), Postives = 144/149 (96.64%), Query Frame = 3 
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CALM_OREMO (Calmodulin OS=Oreochromis mossambicus GN=calm PE=2 SV=3)

HSP 1 Score: 270.781 bits (691), Expect = 7.119e-72
Identity = 132/149 (88.59%), Postives = 144/149 (96.64%), Query Frame = 3 
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELR+VMTNLGEKLTDE VDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRYVMTNLGEKLTDEXVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 9.298e-72
Identity = 131/149 (87.92%), Postives = 145/149 (97.32%), Query Frame = 3 
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            MADQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP++AEL+DMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYEEFVK+M++K
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQINYEEFVKMMLSK 149
[Close]
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 270.011 bits (689), Expect = 1.214e-71
Identity = 132/149 (88.59%), Postives = 142/149 (95.30%), Query Frame = 3 
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD DGDGQ+NYEEFV +M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMMTSK 149
[Close]
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CALM2_BRAFL (Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=2 SV=4)

HSP 1 Score: 268.855 bits (686), Expect = 2.705e-71
Identity = 131/149 (87.92%), Postives = 143/149 (95.97%), Query Frame = 3 
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            MADQLT++QI+EFKEAFSLFDKDG+G ITTKELGTVMRSLGQNPTE ELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAF+VFDKD NGFISAAELRHVMTN GEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGNGNITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDKDGNGFISAAELRHVMTNPGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 3.533e-71
Identity = 133/149 (89.26%), Postives = 142/149 (95.30%), Query Frame = 3 
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            MA+ LT +QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LM+RKM DTD+EEE+KEAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    1 MAEALTHEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMSRKMHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of EY702234 vs. ExPASy Swiss-Prot
Match: CALM_ACHKL (Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3)

HSP 1 Score: 268.085 bits (684), Expect = 4.615e-71
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = 3 
Query:   96 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 542
            MADQLT++QI+EFKEA SLFDKDGDG ITTKELGTVMRS+GQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+ FDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLTEEQIAEFKEAGSLFDKDGDGTITTKELGTVMRSVGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFQGFDKDGNGFISAAELRHMMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
The following BLAST results are available for this feature:
BLAST of EY702234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
CALM_TETPY3.196e-7289.93Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_PAXIN5.451e-7288.59Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3[more]
CALM_STYLE7.119e-7289.93Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_PATSP7.119e-7288.59Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]
CALM_OREMO7.119e-7288.59Calmodulin OS=Oreochromis mossambicus GN=calm PE=2... [more]
CALM_AGABI9.298e-7287.92Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALM_SUBDO1.214e-7188.59Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM2_BRAFL2.705e-7187.92Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=... [more]
CALM_EUGGR3.533e-7189.26Calmodulin OS=Euglena gracilis PE=1 SV=2[more]
CALM_ACHKL4.615e-7188.59Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-E10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702234 ID=EY702234; Name=EY702234; organism=Citrus sinensis; type=EST; length=866bp
TTTCGCGACCCACGCGTCCGAGCTCTTGTTTTCTTGTAAGGAAAAAATAA
ATAAATACCTATTTCTGAGTTGAAAAAACAAACGGAAGAAGAAAAATGGC
GGATCAGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGCCTTCAGCT
TGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACT
GTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACAT
GATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAAT
TCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAG
CTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTC
AGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTG
ATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGC
CAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAGTAATGACC
CCAACCCACCAATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTC
CTAGTTTTCTCTTTTACAATTTTTAATTTGATAGTCATGAGGGTCAGGCT
AAAGGAAGCAATGGTCTTTTAATGGTGATGGGCCTGATGGTGTAGGAAGA
ATGTTGTCTCCCTCGTCAATATGTCTTGTGACTCGCAAAACTTTTCGGTT
TTTATTATTTTTAGTGTTCTGCTGTTCTATGAATGTTGTTGTCTGTTTAA
TGTGTTTCATTAATTTCTGCCCTTGCGATGNTTATTTTTCTTTTGGGCGA
ATATGTATCCTATTTT
back to top