EY702227

Overview
NameEY702227
Unique NameEY702227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_PAPAN (60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 7.692e-77
Identity = 140/206 (67.96%), Postives = 160/206 (77.67%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSL 672
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K  N  H  EALRRAK K PGRQKI +S+K GFTKF+  ++    ++ R++ DG   K +   G L
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_MOUSE (60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=2 SV=3)

HSP 1 Score: 287.345 bits (734), Expect = 7.692e-77
Identity = 140/206 (67.96%), Postives = 160/206 (77.67%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSL 672
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K  N  H  EALRRAK K PGRQKI +S+K GFTKF+  ++    ++ R++ DG   K +   G L
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_HUMAN (60S ribosomal protein L10 OS=Homo sapiens GN=RPL10 PE=1 SV=4)

HSP 1 Score: 287.345 bits (734), Expect = 7.692e-77
Identity = 140/206 (67.96%), Postives = 160/206 (77.67%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSL 672
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K  N  H  EALRRAK K PGRQKI +S+K GFTKF+  ++    ++ R++ DG   K +   G L
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_PONAB (60S ribosomal protein L10 OS=Pongo abelii GN=RPL10 PE=2 SV=3)

HSP 1 Score: 286.189 bits (731), Expect = 1.714e-76
Identity = 140/206 (67.96%), Postives = 159/206 (77.18%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSL 672
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K  N  H  EALRRAK K PGRQKI +S+K GFTKF+  ++    ++ R++ DG   K     G L
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYTPNRGPL 206          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10L_BOVIN (60S ribosomal protein L10-like OS=Bos taurus GN=RPL10L PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.818e-76
Identity = 140/206 (67.96%), Postives = 159/206 (77.18%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSL 672
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K  N  H  EALRRAK K PGRQKI +S+K GFTKF+  ++    +  R++ DG   K +   G L
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAKKRLIPDGCGVKYVPNRGPL 206          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10L_MOUSE (60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.986e-76
Identity = 140/206 (67.96%), Postives = 159/206 (77.18%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSL 672
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K  N  H  EALRRAK K PGRQKI +S+K GFTKF+  ++    +  R++ DG   K +   G L
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAAKRLIPDGCGVKYIPERGPL 206          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_BOMMA (60S ribosomal protein L10 OS=Bombyx mandarina GN=RpL10 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 8.505e-76
Identity = 138/206 (66.99%), Postives = 158/206 (76.70%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSL 672
            MGRRPARCYR  KNKPYPKSRFCRGVPDPKIRI+D+G K+  VD+FP CVHLVS E E +SSEALEA RI CNKY+ K  GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR  D       EALRRAK K PGRQKI VS+K GFTK+ R ++   + + R+  DG   +    HG L
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPL 206          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_MACFA (60S ribosomal protein L10 OS=Macaca fascicularis GN=RPL10 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.895e-75
Identity = 139/206 (67.48%), Postives = 159/206 (77.18%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSL 672
            MGRRPAR YR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K  N  H  EALRRAK K PGRQKI +S+K GFTKF+  ++    ++ R++ DG   K +   G L
Sbjct:    1 MGRRPARRYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10L_HUMAN (60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3)

HSP 1 Score: 280.796 bits (717), Expect = 7.200e-75
Identity = 138/206 (66.99%), Postives = 158/206 (76.70%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSL 672
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP   H+VS E E +SSEALEAARI  NKYM K  G+D FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQV++S+R K  N  H  EALRRAK K PGRQKI +S+K GFTKF+  ++    +   ++ DG   K +  HG L
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLGGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKKCLIPDGCGVKYVPSHGPL 206          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10B_SCHPO (60S ribosomal protein L10-B OS=Schizosaccharomyces pombe GN=rpl10b PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.095e-74
Identity = 140/218 (64.22%), Postives = 167/218 (76.61%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSLARRL---PDRAF 699
            M RRPARCYR  KNKPYPKSR+ R VPD KIRI+D+G K+ GVDEFP C+HLVS E E ++SEALEAARI  NKY+ K  GKD+FHLRVR HPFHV+RINKMLSCAGADRLQTGMR AFGKP G  ARV IGQVL+SVR KDS+   A EALRR + K PG+Q+IIVS+K GF++++R +Y+  +S   I+ DG  AK L   GSL  +L   P+ +F
Sbjct:    1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVNIGQVLMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYAKFLNKRGSLQEKLDLFPEASF 218          
The following BLAST results are available for this feature:
BLAST of EY702227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL10_PAPAN7.692e-7767.9660S ribosomal protein L10 OS=Papio anubis GN=RPL10... [more]
RL10_MOUSE7.692e-7767.9660S ribosomal protein L10 OS=Mus musculus GN=Rpl10... [more]
RL10_HUMAN7.692e-7767.9660S ribosomal protein L10 OS=Homo sapiens GN=RPL10... [more]
RL10_PONAB1.714e-7667.9660S ribosomal protein L10 OS=Pongo abelii GN=RPL10... [more]
RL10L_BOVIN3.818e-7667.9660S ribosomal protein L10-like OS=Bos taurus GN=RP... [more]
RL10L_MOUSE4.986e-7667.9660S ribosomal protein L10-like OS=Mus musculus GN=... [more]
RL10_BOMMA8.505e-7666.9960S ribosomal protein L10 OS=Bombyx mandarina GN=R... [more]
RL10_MACFA1.895e-7567.4860S ribosomal protein L10 OS=Macaca fascicularis G... [more]
RL10L_HUMAN7.200e-7566.9960S ribosomal protein L10-like OS=Homo sapiens GN=... [more]
RL10B_SCHPO2.095e-7464.2260S ribosomal protein L10-B OS=Schizosaccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-E03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702227 ID=EY702227; Name=EY702227; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGAGCAGAAAGAGAGAATAGCTGAGACCGAACACGAACGCT
CGCCATGGGAAGAAGACCGGCAAGGTGTTACCGCCAAATCAAGAACAAAC
CCTACCCAAAGTCCCGCTTTTGCCGCGGTGTCCCCGATCCCAAGATCAGA
ATCTACGATGTCGGGATGAAGAAGAAAGGCGTCGACGAGTTCCCCTTCTG
CGTTCACCTCGTCAGTTGGGAGAAGGAGAACGTGTCGAGCGAGGCCTTGG
AAGCTGCCCGTATCGCTTGCAACAAGTACATGGCCAAGTACGCTGGCAAG
GATGCTTTCCATTTGCGAGTGAGGGTGCACCCCTTCCATGTTCTGCGCAT
TAACAAGATGCTTTCGTGTGCTGGGGCTGATCGGCTCCAGACTGGAATGA
GGGGTGCTTTTGGAAAGCCCCAAGGAACCTGTGCTCGTGTTGCTATCGGG
CAGGTCTTGCTTTCTGTACGTTGCAAGGACAGTAACAGCCACCATGCTCA
GGAGGCCCTTCGCCGTGCTAAGATCAAGATTCCTGGCCGTCAAAAGATTA
TTGTCAGCAGGAAATGCGGATTTACCAAGTTCAGCCGTGCTGATTATCTG
ACGTGGAAGTCGGACTACAGGATTGTCACTGATGGTGTGAATGCCAAGCT
TCTCGGATGTCATGGGTCTTTGGCTCGACGACTACCTGATAGAGCTTTCC
TGGAGGCAACGACCTATGATATTTACTGTCTCAAAATACAGAGCTGTGAC
TACTGACTAGTGTATTATTTTCATTTCGTACCTTTCTCAAGTGGACTGGA
TTTTCTCAGTTCGAGTGACATGGTTATCTGGTTAACTAAGGGATCCTTGC
AGTGGCCTAATGAAATTGCGATTTGCACTCTCAAATTGA
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