EY702227

Overview
NameEY702227
Unique NameEY702227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10A_SCHPO (60S ribosomal protein L10-A OS=Schizosaccharomyces pombe GN=rpl10a PE=2 SV=2)

HSP 1 Score: 278.87 bits (712), Expect = 2.736e-74
Identity = 139/218 (63.76%), Postives = 167/218 (76.61%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSLARRL---PDRAF 699
            M RRPARCYR  KNKPYPKSR+ R VPD KIRI+D+G K+ GVDEFP C+HLVS E E ++SEALEAARI  NKY+ K  GKD+FHLRVR HPFHV+RINKMLSCAGADRLQTGMR AFGKP G  ARV IGQ+L+SVR KDS+   A EALRR + K PG+Q+IIVS+K GF++++R +Y+  +S   I+ DG  AK L   GSL  +L   P+ +F
Sbjct:    1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVNIGQILMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYAKFLNKRGSLQEKLDLFPEASF 218          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_CHICK (60S ribosomal protein L10 (Fragment) OS=Gallus gallus GN=RPL10 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.358e-73
Identity = 135/202 (66.83%), Postives = 154/202 (76.24%), Query Frame = 1
Query:   73 RCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSLAR 678
            RCYR  KNKPYPKSRFCRGVPDPKIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV +GQV++S+R K  N  H  EALRRAK K PGRQKI +S+K GFTKF+   +    +  R++ DG   K +   G L R
Sbjct:    2 RCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHMGQVIMSIRTKAQNKEHVVEALRRAKFKFPGRQKIHISKKWGFTKFNADAFEEMVAQKRLIPDGCGVKYVPGRGPLDR 203          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_YEAST (60S ribosomal protein L10 OS=Saccharomyces cerevisiae GN=RPL10 PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.961e-72
Identity = 138/210 (65.71%), Postives = 154/210 (73.33%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSLARRL 684
            M RRPARCYR  KNKPYPKSR+ R VPD KIRIYD+G KK  VDEFP CVHLVS E E +SSEALEAARI  NKYM   +G+DAFHLRVRVHPFHVLRINKMLSCAGADRLQ GMRGA+GKP G  ARV IGQ++ SVR KDSN     E LRRA+ K PG+QKII+S+K GFT   R +YL  +    +  DG   K L   GSL   +
Sbjct:    1 MARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGKPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLKKREAGEVKDDGAFVKFLSKKGSLENNI 210          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_EUGGR (60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.239e-67
Identity = 128/214 (59.81%), Postives = 149/214 (69.63%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSLARRLPDRA 696
            MGRRPA+CYR  KNK YPKSR+CRGVP+ KIRIYD GM+K   D FP   HL+S E+E + SEALEAARI  NKYM K AGK+A+H+RVRVHPFHV RINKMLSCAGADRLQ GMRGAFGKP G  ARV IGQ L+S+R K  +      AL+RA  K  GRQ I  S   GFT+    +Y+ WK + +   DGV+ K+L   G L R    RA
Sbjct:    1 MGRRPAKCYRYCKNKAYPKSRYCRGVPEAKIRIYDCGMRKLNADTFPLTYHLISMEREQIGSEALEAARINANKYMIKNAGKEAYHIRVRVHPFHVCRINKMLSCAGADRLQQGMRGAFGKPNGLAARVRIGQPLMSIRVKPQHEAVVVAALKRASYKFAGRQVIAKSTMWGFTEIRSENYVKWKEEGKFRVDGVSTKILRNRGRLHRAKRVRA 214          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_TOBAC (60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.468e-64
Identity = 123/147 (83.67%), Postives = 127/147 (86.39%), Query Frame = 1
Query:  268 CNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSLARRLPDRAFLEA 708
            C    A  AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD N++HAQEALRRAK K P RQKIIVSRK GFTKFSR DYL +KS+ RIV DGVNAKLLGCHG LA R P RAFLEA
Sbjct:    1 CGGCEAGSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPRRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGRLAARQPGRAFLEA 147          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_ENCCU (60S ribosomal protein L10 OS=Encephalitozoon cuniculi GN=RPL10 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.468e-64
Identity = 125/206 (60.68%), Postives = 149/206 (72.33%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKFSRADYLTWKSDYRIVTDGVNAKLLGCHGSL 672
            MGRRP RCYR +  K YPKSRF RGVPD KI+I+D+G +K GV EFP  V+ +S E+EN+S+EALEAARI  NKYM K+AGKD FHLR+RV+PFHVLRINKMLSCAGADRLQTGMRG+FGKP G  ARV   Q +LS+R K+S    A EALRRAK K PG QKI VS K GFT     ++       RI+  G +  ++   GS+
Sbjct:    1 MGRRPGRCYRYLSKKAYPKSRFNRGVPDSKIQIFDLGRRKAGVLEFPLLVNCISNERENLSAEALEAARICANKYMVKHAGKDNFHLRIRVYPFHVLRINKMLSCAGADRLQTGMRGSFGKPYGRAARVVFNQPILSIRTKESFRDAAVEALRRAKNKFPGHQKIQVSSKFGFTNMFSDEFNKLNESGRIILRGGSFSVIREKGSI 206          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METKA (50S ribosomal protein L10e OS=Methanopyrus kandleri GN=rpl10e PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.264e-36
Identity = 81/169 (47.93%), Postives = 110/169 (65.09%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561
            M  RPAR YR+ K   Y +  + +GVPDPKI+ +D+G       +F   V LV+ E+  V+  ALEAAR+A N+Y+ K  G+  +HL++RV+P HVLR N + + AGADR+Q GMR AFGKP GT ARV  GQ +++VR    N  HA+EALRRA +K P    I+V +
Sbjct:    1 MVNRPARIYREWKGPAYTRREYIKGVPDPKIQQFDMG---NPAGDFDVEVSLVARERAQVTHNALEAARVAANRYLTKTVGRQNYHLKIRVYPHHVLRENPLATGAGADRVQEGMRLAFGKPIGTAARVREGQRVVTVRIDPENFEHAKEALRRAGMKFPFPFTIVVDK 166          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_STAMF (50S ribosomal protein L10e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.220e-33
Identity = 74/166 (44.58%), Postives = 101/166 (60.84%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKII 552
            M  RPARCY      PY +  +  GVP PKI  +++G       ++ +   LV  E   +   ALEAAR+  NKY++   G   + L++RV+P HVLR NKM++ AGADRLQ GMR AFGKP GT ARV  G +++ VR +  +  HA+EALRRA  K+P   +I+
Sbjct:    1 MPLRPARCYTHFSGPPYTRREYIPGVPQPKIVKFEMGNVH---GDYDYRAELVMIEAGQIRHNALEAARVMANKYLSSTVGDQNYFLKIRVYPHHVLRENKMMAFAGADRLQDGMRQAFGKPIGTAARVYPGTIVMEVRVRKEHVEHAKEALRRAASKLPLPARIV 163          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_AERPE (50S ribosomal protein L10e OS=Aeropyrum pernix GN=rpl10e PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.220e-33
Identity = 75/167 (44.91%), Postives = 102/167 (61.08%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIV 555
            M  RPARCY      PY +  +  GVP PKI  +++G ++  ++++     LV  E   +   ALEAARIA NKY+A   G   F+ R+RV+P HV+R NKM++ AGADRLQ GMR AFGKP GT ARV  G V+L V  +  +  + +EALRR   K P   +I++
Sbjct:    1 MPLRPARCYTHFSGPPYTRREYIHGVPPPKITRFEMGNREM-MEKWEIKGELVMLEAGQIRHNALEAARIAVNKYLATTIGDKNFYFRIRVYPHHVIRENKMMAFAGADRLQDGMRQAFGKPVGTAARVYPGTVVLEVWARKGDEENVKEALRRGASKFPLPSRIVI 166          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_PYRCJ (50S ribosomal protein L10e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.163e-32
Identity = 78/171 (45.61%), Postives = 101/171 (59.06%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRK 564
            M  RPARCYR+IK  PY +  +  G P  +I  +D+G         F     LV+ E+  +  +ALEAAR   +KY+ KY G   ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G  ARV  GQV+  V  K  +  H +EALRRA  K+P   +I+V  K
Sbjct:    1 MPARPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFTMVAKLVAEERGQIRMQALEAARQISSKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYVEFKPEHLAHVKEALRRAASKLPIPTRIVVEPK 171          
The following BLAST results are available for this feature:
BLAST of EY702227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL10A_SCHPO2.736e-7463.7660S ribosomal protein L10-A OS=Schizosaccharomyces... [more]
RL10_CHICK1.358e-7366.8360S ribosomal protein L10 (Fragment) OS=Gallus gal... [more]
RL10_YEAST1.961e-7265.7160S ribosomal protein L10 OS=Saccharomyces cerevis... [more]
RL10_EUGGR3.239e-6759.8160S ribosomal protein L10 OS=Euglena gracilis GN=R... [more]
RL10_TOBAC7.468e-6483.6760S ribosomal protein L10 (Fragment) OS=Nicotiana ... [more]
RL10_ENCCU7.468e-6460.6860S ribosomal protein L10 OS=Encephalitozoon cunic... [more]
RL10_METKA2.264e-3647.9350S ribosomal protein L10e OS=Methanopyrus kandler... [more]
RL10_STAMF5.220e-3344.5850S ribosomal protein L10e OS=Staphylothermus mari... [more]
RL10_AERPE5.220e-3344.9150S ribosomal protein L10e OS=Aeropyrum pernix GN=... [more]
RL10_PYRCJ1.163e-3245.6150S ribosomal protein L10e OS=Pyrobaculum calidifo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-E03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702227 ID=EY702227; Name=EY702227; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGAGCAGAAAGAGAGAATAGCTGAGACCGAACACGAACGCT
CGCCATGGGAAGAAGACCGGCAAGGTGTTACCGCCAAATCAAGAACAAAC
CCTACCCAAAGTCCCGCTTTTGCCGCGGTGTCCCCGATCCCAAGATCAGA
ATCTACGATGTCGGGATGAAGAAGAAAGGCGTCGACGAGTTCCCCTTCTG
CGTTCACCTCGTCAGTTGGGAGAAGGAGAACGTGTCGAGCGAGGCCTTGG
AAGCTGCCCGTATCGCTTGCAACAAGTACATGGCCAAGTACGCTGGCAAG
GATGCTTTCCATTTGCGAGTGAGGGTGCACCCCTTCCATGTTCTGCGCAT
TAACAAGATGCTTTCGTGTGCTGGGGCTGATCGGCTCCAGACTGGAATGA
GGGGTGCTTTTGGAAAGCCCCAAGGAACCTGTGCTCGTGTTGCTATCGGG
CAGGTCTTGCTTTCTGTACGTTGCAAGGACAGTAACAGCCACCATGCTCA
GGAGGCCCTTCGCCGTGCTAAGATCAAGATTCCTGGCCGTCAAAAGATTA
TTGTCAGCAGGAAATGCGGATTTACCAAGTTCAGCCGTGCTGATTATCTG
ACGTGGAAGTCGGACTACAGGATTGTCACTGATGGTGTGAATGCCAAGCT
TCTCGGATGTCATGGGTCTTTGGCTCGACGACTACCTGATAGAGCTTTCC
TGGAGGCAACGACCTATGATATTTACTGTCTCAAAATACAGAGCTGTGAC
TACTGACTAGTGTATTATTTTCATTTCGTACCTTTCTCAAGTGGACTGGA
TTTTCTCAGTTCGAGTGACATGGTTATCTGGTTAACTAAGGGATCCTTGC
AGTGGCCTAATGAAATTGCGATTTGCACTCTCAAATTGA
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