EY702227

Overview
NameEY702227
Unique NameEY702227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METBU (50S ribosomal protein L10e OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.623e-26
Identity = 64/169 (37.87%), Postives = 102/169 (60.36%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561
            M R+PA  YR +K++ + + ++  GVP  ++  +D+G K     +FP  + L++ E+  +   ALEAARI  N+ M   AG+  FH+++RV+P  VLR NK  + AGADR+ +GMR A+GK   T ARV+  Q + ++     +   A++ALRRA  K+P    I+V +
Sbjct:    1 MVRKPASMYRNVKSRSFTRRKYMGGVPGSQVIHFDMGNKTA---DFPVKITLLADERCQIRHTALEAARITANRAMTTAAGRSGFHMKLRVYPHEVLRENKQATGAGADRVSSGMRAAYGKNVSTAARVSARQKIFTISVNKEHFIIAKDALRRAGQKLPTPVTIVVDQ 166          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METTH (50S ribosomal protein L10e OS=Methanobacterium thermoautotrophicum GN=rpl10e PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.072e-26
Identity = 62/155 (40.00%), Postives = 92/155 (59.35%), Query Frame = 1
Query:   97 KPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561
            + Y +  + + +P  KI  YD+G       EFP  + +       ++  ALEAARIA N+YM + AG+  +HL++RV+P H++R N M + AGADR+Q GMR AFGKP  T A V   Q ++++     N   A+EALRRA +K P   +I++ R
Sbjct:    3 RAYTRREYIKKIPGSKIVQYDMGNLSA---EFPISLSVAVKAPTQITHNALEAARIASNRYMQRRAGRMGYHLKIRVYPHHIVRENPMATGAGADRVQDGMRKAFGKPVSTVALVKKNQKIITIETNKKNFKDAKEALRRAAMKFPVPCRIVIDR 154          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_THEON (50S ribosomal protein L10e OS=Thermococcus onnurineus (strain NA1) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.054e-25
Identity = 65/160 (40.62%), Postives = 90/160 (56.25%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIP 534
            MG RPA+  R +    Y +  + RG P PKI I+D+G       EF + V L + +   +   ALEA RI  N+Y+ K  G+  +H ++RV+PF VLR N M +   ADR   GMR  FGKP G  ARV   Q +L+V   + +   A EA+RRA +K+P
Sbjct:    1 MGLRPAKIDRDVDKPAYTRREYIRGAPGPKITIFDMGNLSA---EFQYEVSLHAEQAMQIRQNALEAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARVKKDQKILTVWVNEGHLKFALEAMRRAAMKLP 157          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METLZ (50S ribosomal protein L10e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.054e-25
Identity = 66/167 (39.52%), Postives = 97/167 (58.08%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIV 555
            M R+PAR YR +  K Y +  +  GVP  K+  +D+G      ++FP  +HL + E   +   A+EAARI  N+ + K  G++ FHL++R +P HVLR +K  + AGADR+  GMR AFGK  GT ARVA  Q + +V         A++AL  +  K+P   ++IV
Sbjct:    1 MVRKPARMYRNLAKKAYCRREYMGGVPGLKVVQFDMGNLS---EDFPVAIHLEALEACQIRHTAMEAARINMNRRLMKTVGRNNFHLKIRAYPHHVLREHKQATGAGADRVSEGMRLAFGKAVGTAARVAPRQRVFTVWTTPQYVDQAKDALLHSGYKLPTPVRVIV 164          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METMA (50S ribosomal protein L10e OS=Methanosarcina mazei GN=rpl10e PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.377e-25
Identity = 66/167 (39.52%), Postives = 99/167 (59.28%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIV 555
            M R+P   YR ++ + + + ++  GVP  ++  YD+G K      FP  + LV+ EK  +   ALEAARI  N+++   AGK  F++++RV+P  VLR NK  + AGADR+ +GMR AFGK  GT ARV   Q L +V  +  N   A++AL  A  K+P   +I++
Sbjct:    1 MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKANTT--FPVKISLVAEEKCQIRHTALEAARITANRHLVADAGKMGFYMKLRVYPHEVLRENKQATGAGADRVSSGMRRAFGKNVGTAARVNSMQKLFTVAVEKQNFPAAKKALWHAGQKLPTPVRIVI 165          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METPE (50S ribosomal protein L10e OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.348e-25
Identity = 64/169 (37.87%), Postives = 94/169 (55.62%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561
            M R+P + YR +  K Y + ++  GVP  KI  +++G   +   EFP  + L   E   +   ALEAARIA N+ M    G+  FH ++R +P HVLR NK  + AGADR+  GMR AFGK  GT ARV   Q + +V   +     +++ALR    K+P   ++++ R
Sbjct:    1 MVRKPGKMYRNLAKKAYTRRKYMGGVPGSKIVQFEMGNLSQ---EFPVEISLEVLESCQIRHTALEAARIAINRKMMDQVGRANFHFKIRTYPHHVLRENKQATGAGADRVSEGMRMAFGKAVGTAARVQPKQKVFTVYTNEQYIEKSKDALRHGGYKLPSPARLVIER 166          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_HALMA (50S ribosomal protein L10e OS=Haloarcula marismortui GN=rpl10e PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.006e-25
Identity = 63/170 (37.06%), Postives = 95/170 (55.88%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561
            M  +PA  YR I    Y +  +  G+P  KI  + +G K+K  D++P  + L+  E   +   +LEA+R++ N+++ K  G++  + + +R  P  VLR NK  + AGADR+  GMR AFGK  GT ARV  G+ L +  C   ++ H +EA RRA  KI    +I V R
Sbjct:    1 MSDKPASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSCRIKVER 170          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_THEGJ (50S ribosomal protein L10e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.232e-25
Identity = 64/160 (40.00%), Postives = 89/160 (55.62%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIP 534
            MG RPA+  R +    Y +  + RG P PKI I+D+G       EF + V L + +   +   ALEA RI  N+Y+ K  G+  +H ++RV+PF VLR N M +   ADR   GMR  FGKP G  ARV   Q +L+V   + +   A  A+ RAK+K+P
Sbjct:    1 MGLRPAKIDRDVDKPAYTRREYIRGAPGPKITIFDMGNLSA---EFEYEVSLHAEQAMQIRQNALEAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARVKKDQKILTVWVNEQHLKFALGAMHRAKMKLP 157          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METMJ (50S ribosomal protein L10e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.232e-25
Identity = 67/169 (39.64%), Postives = 94/169 (55.62%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561
            M R+PA+ YR +  K Y +  +  GVP  KI  +D+G      +++P  + +V  E   +   ALEAARI  N+ + K  G+  FHL++R  P HVLR NK  + AGADR+  GMR AFGK  GT ARV  GQ + SV         A+ +L+R   K+P   +I+  R
Sbjct:    1 MVRKPAKMYRNLAKKAYTRREYMGGVPGSKIVQFDMGNL---TEDYPVELSIVVDETCQIRHTALEAARIGINRQLQKEVGRANFHLKIRTFPHHVLRENKQATGAGADRVSEGMRLAFGKAVGTAARVEKGQKVFSVWTSPQYVDKAKVSLKRGIYKLPTPARIVEER 166          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METAC (50S ribosomal protein L10e OS=Methanosarcina acetivorans GN=rpl10e PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.833e-25
Identity = 64/167 (38.32%), Postives = 97/167 (58.08%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIV 555
            M R+P   YR ++ + + + ++  GVP  ++  YD+G K      FP  + L+  EK  +   ALEAARI  N+++    GK  F++++RV+P  V+R NK  + AGADR+ +GMR AFGK  GT ARV   Q + +V  +  N   A+EAL  A  K+P   +I+V
Sbjct:    1 MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKAN--TSFPVKISLIVEEKCQIRHTALEAARITANRHLVADTGKMGFYMKLRVYPHEVIRENKQATGAGADRVSSGMRRAFGKNVGTAARVKPMQKIFTVAVEKQNFKAAKEALWHAGQKLPTPCRIVV 165          
The following BLAST results are available for this feature:
BLAST of EY702227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL10_METBU3.623e-2637.8750S ribosomal protein L10e OS=Methanococcoides bur... [more]
RL10_METTH8.072e-2640.0050S ribosomal protein L10e OS=Methanobacterium the... [more]
RL10_THEON1.054e-2540.6350S ribosomal protein L10e OS=Thermococcus onnurin... [more]
RL10_METLZ1.054e-2539.5250S ribosomal protein L10e OS=Methanocorpusculum l... [more]
RL10_METMA1.377e-2539.5250S ribosomal protein L10e OS=Methanosarcina mazei... [more]
RL10_METPE2.348e-2537.8750S ribosomal protein L10e OS=Methanosphaerula pal... [more]
RL10_HALMA4.006e-2537.0650S ribosomal protein L10e OS=Haloarcula marismort... [more]
RL10_THEGJ5.232e-2540.0050S ribosomal protein L10e OS=Thermococcus gammato... [more]
RL10_METMJ5.232e-2539.6450S ribosomal protein L10e OS=Methanoculleus maris... [more]
RL10_METAC6.833e-2538.3250S ribosomal protein L10e OS=Methanosarcina aceti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-E03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702227 ID=EY702227; Name=EY702227; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGAGCAGAAAGAGAGAATAGCTGAGACCGAACACGAACGCT
CGCCATGGGAAGAAGACCGGCAAGGTGTTACCGCCAAATCAAGAACAAAC
CCTACCCAAAGTCCCGCTTTTGCCGCGGTGTCCCCGATCCCAAGATCAGA
ATCTACGATGTCGGGATGAAGAAGAAAGGCGTCGACGAGTTCCCCTTCTG
CGTTCACCTCGTCAGTTGGGAGAAGGAGAACGTGTCGAGCGAGGCCTTGG
AAGCTGCCCGTATCGCTTGCAACAAGTACATGGCCAAGTACGCTGGCAAG
GATGCTTTCCATTTGCGAGTGAGGGTGCACCCCTTCCATGTTCTGCGCAT
TAACAAGATGCTTTCGTGTGCTGGGGCTGATCGGCTCCAGACTGGAATGA
GGGGTGCTTTTGGAAAGCCCCAAGGAACCTGTGCTCGTGTTGCTATCGGG
CAGGTCTTGCTTTCTGTACGTTGCAAGGACAGTAACAGCCACCATGCTCA
GGAGGCCCTTCGCCGTGCTAAGATCAAGATTCCTGGCCGTCAAAAGATTA
TTGTCAGCAGGAAATGCGGATTTACCAAGTTCAGCCGTGCTGATTATCTG
ACGTGGAAGTCGGACTACAGGATTGTCACTGATGGTGTGAATGCCAAGCT
TCTCGGATGTCATGGGTCTTTGGCTCGACGACTACCTGATAGAGCTTTCC
TGGAGGCAACGACCTATGATATTTACTGTCTCAAAATACAGAGCTGTGAC
TACTGACTAGTGTATTATTTTCATTTCGTACCTTTCTCAAGTGGACTGGA
TTTTCTCAGTTCGAGTGACATGGTTATCTGGTTAACTAAGGGATCCTTGC
AGTGGCCTAATGAAATTGCGATTTGCACTCTCAAATTGA
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