EY702227

Overview
NameEY702227
Unique NameEY702227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_SULIK (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23
Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKI 549
            M  RP RCYR      Y +  +  G+P PKI  +  G       ++ + V L++ E   +   ALEA R    K + K  G + +F + +  +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+  +G++L+ V+ K  +   A+EAL+ A  K+P R +I
Sbjct:    1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_SULIA (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23
Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKI 549
            M  RP RCYR      Y +  +  G+P PKI  +  G       ++ + V L++ E   +   ALEA R    K + K  G + +F + +  +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+  +G++L+ V+ K  +   A+EAL+ A  K+P R +I
Sbjct:    1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_PYRAB (50S ribosomal protein L10e OS=Pyrococcus abyssi GN=rpl10e PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23
Identity = 63/160 (39.38%), Postives = 85/160 (53.12%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIP 534
            M  RPA+  R +    Y +  + RG P PKI I+D+G       +F F V L   +   +   ALEAAR   N+Y+ K  G+  +H ++RV+PF VLR N M +   ADR   GMR  FGKP G  AR+   Q +LS+R    +   A E  RRA +K P
Sbjct:    1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVALHVSQPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_SULSO (50S ribosomal protein L10e OS=Sulfolobus solfataricus GN=rpl10e PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23
Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKI 549
            M  RP RCYR      Y +  +  G+P PKI  +  G       ++ + V L++ E   +   ALEA R    K ++K  G + +F + +  +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+  +G+ L+ ++ K  +   A+EAL+ A  K+P R +I
Sbjct:    1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTLTLKTLSKKTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGETLIVIKVKKEHLEFAKEALKIASKKLPLRTRI 164          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METHJ (50S ribosomal protein L10e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23
Identity = 62/170 (36.47%), Postives = 92/170 (54.12%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRK 564
            M R+P   YR +  K Y +  +  G+P  K+  +D+G       EFP  V LV  E   +   ALEAAR++ N+ + K  G+  +HL++R +P HVLR NK  + AGADR+  GMR AFGK  GT AR    Q + +V    ++    ++ALR    K+P    +++  K
Sbjct:    1 MVRKPNSMYRNLAKKAYTRKEYMGGIPGVKVVHFDMGNL---TSEFPMEVSLVVDESCQIRHSALEAARMSINRKLNKELGRMNYHLKLRTYPHHVLRENKQATGAGADRVSQGMRLAFGKAVGTAARCQQNQKIFTVFSNPASVEKIKDALRHGGHKLPSPTHLVIEMK 167          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_HALSA (50S ribosomal protein L10e OS=Halobacterium salinarium GN=rpl10e PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23
Identity = 60/169 (35.50%), Postives = 93/169 (55.03%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561
            M  +PA  YR+I    Y +  +  G+P  KI  + +G  +   D++P  + LV  E+  +   +LEAAR++ N+++ K  G+  + +++R  P  ++R NK  + AGADR+  GMR AFG P GT AR+  G  L +  C+   +   +EA RRA  KI    KI V R
Sbjct:    1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_HALS3 (50S ribosomal protein L10e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23
Identity = 60/169 (35.50%), Postives = 93/169 (55.03%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561
            M  +PA  YR+I    Y +  +  G+P  KI  + +G  +   D++P  + LV  E+  +   +LEAAR++ N+++ K  G+  + +++R  P  ++R NK  + AGADR+  GMR AFG P GT AR+  G  L +  C+   +   +EA RRA  KI    KI V R
Sbjct:    1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METST (50S ribosomal protein L10e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.749e-23
Identity = 60/162 (37.04%), Postives = 94/162 (58.02%), Query Frame = 1
Query:   97 KPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKF 582
            +PY +  + R +P  KI  YD+G       EFP  V L   E  ++S  +LEAARIA N+Y+ +  GK  + L++R +P H++R N M + AGADR+Q+GMRGAFGK   + A V   Q +++   +  +   A+ AL RA +K+P   K+++ +     +F
Sbjct:    3 RPYTRKDYIRKIPASKIVQYDMGNLS---GEFPLEVTLAVKEHTHLSHNSLEAARIAANRYLQRTTGKLGYRLKIRTYPHHIVRENPMATGAGADRVQSGMRGAFGKAVSSEALVRANQKIITAYVQVKDFEKAKVALNRAAMKLPVTCKLVIDKGHDLVQF 161          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_HALWD (50S ribosomal protein L10e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.861e-22
Identity = 57/176 (32.39%), Postives = 99/176 (56.25%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRA--------KIKIPGRQKIIVS 558
            M  +PA  YR++    Y +  +  G+P  KI  +++G  + G  ++P  + L   E+  +   +LE+AR++ N+ M K  G+D + + +R  P  +LR NK  + AGADR+  GMR AFGKP GT AR+   + + ++ C+  ++  A++ LRRA        +I +   QK+++S
Sbjct:    1 MSDKPASMYRKLSKPSYTRRDYVTGIPGSKIAQHNMGNLQTGPQDYPVQISLRIEEECQIRHGSLESARLSANRTMLKQVGQDNYKMVLRKFPHQILRENKQATGAGADRVSDGMRQAFGKPVGTAARIQQNERVFTIYCEVDDASVAKDGLRRAYNKMSPPCRIDVEKGQKLLIS 176          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_HALLT (50S ribosomal protein L10e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.334e-20
Identity = 55/169 (32.54%), Postives = 90/169 (53.25%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561
            M  +PA  YR I    Y +  +  G+P  KI  +++G      D++P  + L   E+  +   +LE++R++ N+++ K  G+  + + +R  P  V+R NK  + AGADR+  GMR AFGKP GT AR+    ++ +  C    +   +EA RRA  K+    +I V R
Sbjct:    1 MSDKPASMYRTIDKPSYTRREYITGIPGSKIAQHNMGDLSAEPDDYPVQISLRVEEELQIRHGSLESSRLSANRHLIKELGEGNYKMTLRKFPHQVIRENKQATGAGADRVSDGMRQAFGKPVGTAARLNKDDIVFTAYCDVEQASVVKEAFRRAYNKLSPPCRITVDR 169          
The following BLAST results are available for this feature:
BLAST of EY702227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL10_SULIK1.683e-2338.3250S ribosomal protein L10e OS=Sulfolobus islandicu... [more]
RL10_SULIA1.683e-2338.3250S ribosomal protein L10e OS=Sulfolobus islandicu... [more]
RL10_PYRAB1.683e-2339.3850S ribosomal protein L10e OS=Pyrococcus abyssi GN... [more]
RL10_SULSO2.871e-2337.7250S ribosomal protein L10e OS=Sulfolobus solfatari... [more]
RL10_METHJ2.871e-2336.4750S ribosomal protein L10e OS=Methanospirillum hun... [more]
RL10_HALSA2.871e-2335.5050S ribosomal protein L10e OS=Halobacterium salina... [more]
RL10_HALS32.871e-2335.5050S ribosomal protein L10e OS=Halobacterium salina... [more]
RL10_METST3.749e-2337.0450S ribosomal protein L10e OS=Methanosphaera stadt... [more]
RL10_HALWD1.861e-2232.3950S ribosomal protein L10e OS=Haloquadratum walsby... [more]
RL10_HALLT1.334e-2032.5450S ribosomal protein L10e OS=Halorubrum lacusprof... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-E03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702227 ID=EY702227; Name=EY702227; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGAGCAGAAAGAGAGAATAGCTGAGACCGAACACGAACGCT
CGCCATGGGAAGAAGACCGGCAAGGTGTTACCGCCAAATCAAGAACAAAC
CCTACCCAAAGTCCCGCTTTTGCCGCGGTGTCCCCGATCCCAAGATCAGA
ATCTACGATGTCGGGATGAAGAAGAAAGGCGTCGACGAGTTCCCCTTCTG
CGTTCACCTCGTCAGTTGGGAGAAGGAGAACGTGTCGAGCGAGGCCTTGG
AAGCTGCCCGTATCGCTTGCAACAAGTACATGGCCAAGTACGCTGGCAAG
GATGCTTTCCATTTGCGAGTGAGGGTGCACCCCTTCCATGTTCTGCGCAT
TAACAAGATGCTTTCGTGTGCTGGGGCTGATCGGCTCCAGACTGGAATGA
GGGGTGCTTTTGGAAAGCCCCAAGGAACCTGTGCTCGTGTTGCTATCGGG
CAGGTCTTGCTTTCTGTACGTTGCAAGGACAGTAACAGCCACCATGCTCA
GGAGGCCCTTCGCCGTGCTAAGATCAAGATTCCTGGCCGTCAAAAGATTA
TTGTCAGCAGGAAATGCGGATTTACCAAGTTCAGCCGTGCTGATTATCTG
ACGTGGAAGTCGGACTACAGGATTGTCACTGATGGTGTGAATGCCAAGCT
TCTCGGATGTCATGGGTCTTTGGCTCGACGACTACCTGATAGAGCTTTCC
TGGAGGCAACGACCTATGATATTTACTGTCTCAAAATACAGAGCTGTGAC
TACTGACTAGTGTATTATTTTCATTTCGTACCTTTCTCAAGTGGACTGGA
TTTTCTCAGTTCGAGTGACATGGTTATCTGGTTAACTAAGGGATCCTTGC
AGTGGCCTAATGAAATTGCGATTTGCACTCTCAAATTGA
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