EY702227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_SULIK (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl10e PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23 Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 1 Query: 55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKI 549 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K+P R +I Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_SULIA (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl10e PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23 Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 1 Query: 55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKI 549 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K+P R +I Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_PYRAB (50S ribosomal protein L10e OS=Pyrococcus abyssi GN=rpl10e PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23 Identity = 63/160 (39.38%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIP 534 M RPA+ R + Y + + RG P PKI I+D+G +F F V L + + ALEAAR N+Y+ K G+ +H ++RV+PF VLR N M + ADR GMR FGKP G AR+ Q +LS+R + A E RRA +K P Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVALHVSQPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_SULSO (50S ribosomal protein L10e OS=Sulfolobus solfataricus GN=rpl10e PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23 Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 1 Query: 55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKI 549 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K ++K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G+ L+ ++ K + A+EAL+ A K+P R +I Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTLTLKTLSKKTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGETLIVIKVKKEHLEFAKEALKIASKKLPLRTRI 164
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METHJ (50S ribosomal protein L10e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl10e PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23 Identity = 62/170 (36.47%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRK 564 M R+P YR + K Y + + G+P K+ +D+G EFP V LV E + ALEAAR++ N+ + K G+ +HL++R +P HVLR NK + AGADR+ GMR AFGK GT AR Q + +V ++ ++ALR K+P +++ K Sbjct: 1 MVRKPNSMYRNLAKKAYTRKEYMGGIPGVKVVHFDMGNL---TSEFPMEVSLVVDESCQIRHSALEAARMSINRKLNKELGRMNYHLKLRTYPHHVLRENKQATGAGADRVSQGMRLAFGKAVGTAARCQQNQKIFTVFSNPASVEKIKDALRHGGHKLPSPTHLVIEMK 167
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_HALSA (50S ribosomal protein L10e OS=Halobacterium salinarium GN=rpl10e PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23 Identity = 60/169 (35.50%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561 M +PA YR+I Y + + G+P KI + +G + D++P + LV E+ + +LEAAR++ N+++ K G+ + +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ + +EA RRA KI KI V R Sbjct: 1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_HALS3 (50S ribosomal protein L10e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23 Identity = 60/169 (35.50%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561 M +PA YR+I Y + + G+P KI + +G + D++P + LV E+ + +LEAAR++ N+++ K G+ + +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ + +EA RRA KI KI V R Sbjct: 1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_METST (50S ribosomal protein L10e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl10e PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.749e-23 Identity = 60/162 (37.04%), Postives = 94/162 (58.02%), Query Frame = 1 Query: 97 KPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSRKCGFTKF 582 +PY + + R +P KI YD+G EFP V L E ++S +LEAARIA N+Y+ + GK + L++R +P H++R N M + AGADR+Q+GMRGAFGK + A V Q +++ + + A+ AL RA +K+P K+++ + +F Sbjct: 3 RPYTRKDYIRKIPASKIVQYDMGNLS---GEFPLEVTLAVKEHTHLSHNSLEAARIAANRYLQRTTGKLGYRLKIRTYPHHIVRENPMATGAGADRVQSGMRGAFGKAVSSEALVRANQKIITAYVQVKDFEKAKVALNRAAMKLPVTCKLVIDKGHDLVQF 161
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_HALWD (50S ribosomal protein L10e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl10e PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.861e-22 Identity = 57/176 (32.39%), Postives = 99/176 (56.25%), Query Frame = 1 Query: 55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRA--------KIKIPGRQKIIVS 558 M +PA YR++ Y + + G+P KI +++G + G ++P + L E+ + +LE+AR++ N+ M K G+D + + +R P +LR NK + AGADR+ GMR AFGKP GT AR+ + + ++ C+ ++ A++ LRRA +I + QK+++S Sbjct: 1 MSDKPASMYRKLSKPSYTRRDYVTGIPGSKIAQHNMGNLQTGPQDYPVQISLRIEEECQIRHGSLESARLSANRTMLKQVGQDNYKMVLRKFPHQILRENKQATGAGADRVSDGMRQAFGKPVGTAARIQQNERVFTIYCEVDDASVAKDGLRRAYNKMSPPCRIDVEKGQKLLIS 176
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_HALLT (50S ribosomal protein L10e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl10e PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.334e-20 Identity = 55/169 (32.54%), Postives = 90/169 (53.25%), Query Frame = 1 Query: 55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561 M +PA YR I Y + + G+P KI +++G D++P + L E+ + +LE++R++ N+++ K G+ + + +R P V+R NK + AGADR+ GMR AFGKP GT AR+ ++ + C + +EA RRA K+ +I V R Sbjct: 1 MSDKPASMYRTIDKPSYTRREYITGIPGSKIAQHNMGDLSAEPDDYPVQISLRVEEELQIRHGSLESSRLSANRHLIKELGEGNYKMTLRKFPHQVIRENKQATGAGADRVSDGMRQAFGKPVGTAARLNKDDIVFTAYCDVEQASVVKEAFRRAYNKLSPPCRITVDR 169 The following BLAST results are available for this feature:
BLAST of EY702227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702227 ID=EY702227; Name=EY702227; organism=Citrus sinensis; type=EST; length=889bpback to top |