EY702227

Overview
NameEY702227
Unique NameEY702227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_NATPD (50S ribosomal protein L10e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl10e PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.067e-20
Identity = 57/170 (33.53%), Postives = 92/170 (54.12%), Query Frame = 1
Query:   55 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKIKIPGRQKIIVSR 561
            M  +PA  YR I    Y +  +  G+P  K+  Y +G  +   +++   + L+  E+  +   +LEA+R++ N+ M K  G+D  + + +R  P  V+R NK  + AGADR+  GMR AFGK  GT AR+  G+ + ++ C   ++  A++A RRA  KI     I V R
Sbjct:    1 MSDKPASMYRDIDKPAYTRREYITGIPGSKVAQYKMGNFEADPEDYEVQISLIVDEEVQIRHGSLEASRLSANRRMLKELGEDGDYKMILRKFPHQVIRENKQATGAGADRVSDGMRQAFGKIVGTAARINKGERVFTIWCHPEDADAAKDAFRRAYNKISPPCTIKVER 170          
BLAST of EY702227 vs. ExPASy Swiss-Prot
Match: RL10_NANEQ (50S ribosomal protein L10e OS=Nanoarchaeum equitans GN=rpl10e PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.087e-14
Identity = 51/174 (29.31%), Postives = 90/174 (51.72%), Query Frame = 1
Query:   76 CYRQIKNKPYPK------SRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKML-SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKD-SNSHHAQEALRRAKIKIPGR-QKIIVSRKCG 570
            CYR+++  PY +        +  G     +R++ +G   +   E+ +   LV+ E   +   A+EA R+  NKY+    GK  +   +R +P H+ R   ++   AGADR+  GMR +FG+P+G   ++  G+ LLS+   D + +   +  L+ A+ K+P R ++ IV  K G
Sbjct:    9 CYRKLE-VPYTRVSRSKNKNYIPGAKPTMVRLFHMGELTRNPSEWQYEASLVAKENHQIRDNAIEAIRVMVNKYLESTLGKKRYLFIIRKYPHHIYREKPVVGGYAGADRISQGMRLSFGRPKGRAVQIYEGEKLLSIFFDDITKAKDIKYFLQVARSKLPWRYREEIVEVKSG 181          
The following BLAST results are available for this feature:
BLAST of EY702227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RL10_NATPD5.067e-2033.5350S ribosomal protein L10e OS=Natronomonas pharaon... [more]
RL10_NANEQ7.087e-1429.3150S ribosomal protein L10e OS=Nanoarchaeum equitan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-E03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702227 ID=EY702227; Name=EY702227; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGAGCAGAAAGAGAGAATAGCTGAGACCGAACACGAACGCT
CGCCATGGGAAGAAGACCGGCAAGGTGTTACCGCCAAATCAAGAACAAAC
CCTACCCAAAGTCCCGCTTTTGCCGCGGTGTCCCCGATCCCAAGATCAGA
ATCTACGATGTCGGGATGAAGAAGAAAGGCGTCGACGAGTTCCCCTTCTG
CGTTCACCTCGTCAGTTGGGAGAAGGAGAACGTGTCGAGCGAGGCCTTGG
AAGCTGCCCGTATCGCTTGCAACAAGTACATGGCCAAGTACGCTGGCAAG
GATGCTTTCCATTTGCGAGTGAGGGTGCACCCCTTCCATGTTCTGCGCAT
TAACAAGATGCTTTCGTGTGCTGGGGCTGATCGGCTCCAGACTGGAATGA
GGGGTGCTTTTGGAAAGCCCCAAGGAACCTGTGCTCGTGTTGCTATCGGG
CAGGTCTTGCTTTCTGTACGTTGCAAGGACAGTAACAGCCACCATGCTCA
GGAGGCCCTTCGCCGTGCTAAGATCAAGATTCCTGGCCGTCAAAAGATTA
TTGTCAGCAGGAAATGCGGATTTACCAAGTTCAGCCGTGCTGATTATCTG
ACGTGGAAGTCGGACTACAGGATTGTCACTGATGGTGTGAATGCCAAGCT
TCTCGGATGTCATGGGTCTTTGGCTCGACGACTACCTGATAGAGCTTTCC
TGGAGGCAACGACCTATGATATTTACTGTCTCAAAATACAGAGCTGTGAC
TACTGACTAGTGTATTATTTTCATTTCGTACCTTTCTCAAGTGGACTGGA
TTTTCTCAGTTCGAGTGACATGGTTATCTGGTTAACTAAGGGATCCTTGC
AGTGGCCTAATGAAATTGCGATTTGCACTCTCAAATTGA
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