EY702175

Overview
NameEY702175
Unique NameEY702175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.727e-19
Identity = 52/150 (34.67%), Postives = 77/150 (51.33%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWWEVFXXXXXXXXXXXXXRREYSDQQQEGNVPVVGLGSGSCSSPEKVAQGRYDHILET 469
            W PEED IL +Y++++GP  W  I    G  L R  KSC  RW NYL+PGIK+G  +  E+ ++I LQA  GN+W  IAS +P RT   +  +W                + E     + G       G+ S  S + V++G+++  L+T
Sbjct:   17 WTPEEDIILVSYIQEHGPGNWRAIPSNTG--LLRCSKSCRLRWTNYLRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNT----------HLKKKLEKLQSPENGKCQD---GNSSVDSDKSVSKGQWERRLQT 151          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.666e-18
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W   EDAIL  YVK++G   WN + +  G  L R  KSC  RW N+L+P +KKG+ + EE+ L+I L +K GNKW ++A+ +PGRT   +  +W
Sbjct:   45 WTSAEDAILVDYVKKHGEGNWNAVQKNTG--LFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYW 136          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.666e-18
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W   EDAIL  YVK++G   WN + +  G  L R  KSC  RW N+L+P +KKG+ + EE+ L+I L +K GNKW ++A+ +PGRT   +  +W
Sbjct:   45 WTSAEDAILVDYVKKHGEGNWNAVQKNTG--LFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYW 136          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.176e-18
Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  +ED  L   V+ +G + W+ I++  G  LNR  KSC  RW NYL PG+K+G +SP E+ L++ L A++GN+W +IA  +PGRT   +  +W
Sbjct:   13 WTEQEDLQLVCTVRLFGERRWDFIAKVSG--LNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYW 104          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.842e-18
Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  +ED  L   V+ +G + W+ +++  G  LNR  KSC  RW NYL PG+K G +SP+E+ L+I L A++GN+W +IA  +PGRT   +  +W
Sbjct:   13 WTEQEDLQLVCTVRLFGDRRWDFVAKVSG--LNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYW 104          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.080e-17
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  EED IL  YVK +G   WN I+++ G  L R  KSC  RW NYL P +K+G+ + +E+ L+I L    GN+W  IA  VPGRT  ++  +W
Sbjct:   21 WTVEEDKILMDYVKAHGKGHWNRIAKKTG--LKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYW 112          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.080e-17
Identity = 47/134 (35.07%), Postives = 67/134 (50.00%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWWEVFXXXXXXXXXXXXXRREYSDQQQEGNVPVVGLGSGSCS 421
            W   ED IL+ Y+  +G  +W+ +  + G  L R  KSC  RWKNYL+PGIK+G++S +E+ L+I L    GN+W  IA  +PGRT   +   W                +R       E NV V+   +  CS
Sbjct:   19 WTDHEDKILRDYITTHGEGKWSTLPNQAG--LKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPKTQTKQPKRIKHSTNNENNVCVIRTKAIRCS 150          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.411e-17
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  EED++L+  + +YG  +W+ +  R G  LNR  KSC  RW NYLKP IK+G LS +E  L++ L    GN+W  IA  +PGRTA  +  +W
Sbjct:   13 WTTEEDSLLRQCINKYGEGKWHQVPVRAG--LNRCRKSCRLRWLNYLKPSIKRGKLSSDEVDLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYW 104          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.143e-17
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  EED++L+  + +YG  +W+ +  R G  LNR  KSC  RW NYLKP IK+G LS +E  L++ L    GN+W  IA  +PGRTA  +  +W
Sbjct:   13 WTAEEDSLLRLCIDKYGEGKWHQVPLRAG--LNRCRKSCRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYW 104          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.143e-17
Identity = 42/94 (44.68%), Postives = 55/94 (58.51%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W PEED  L AY+ + G   W  + +  G  LNR  KSC  RW NYL+P I++G  S  E+S ++ L A  GNKW KIA  +PGRT   +  +W
Sbjct:   18 WLPEEDDKLTAYINENGYGNWRSLPKLAG--LNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYW 109          
The following BLAST results are available for this feature:
BLAST of EY702175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
MYB06_ANTMA5.727e-1934.67Myb-related protein 306 OS=Antirrhinum majus GN=MY... [more]
GAM1_ORYSJ1.666e-1844.68Transcription factor GAMYB OS=Oryza sativa subsp. ... [more]
GAM1_ORYSI1.666e-1844.68Transcription factor GAMYB OS=Oryza sativa subsp. ... [more]
MYBA2_ORYSJ2.176e-1842.55Myb-related protein MYBAS2 OS=Oryza sativa subsp. ... [more]
MYBA1_ORYSJ2.842e-1842.55Myb-related protein MYBAS1 OS=Oryza sativa subsp. ... [more]
WER_ARATH1.080e-1744.68Transcription factor WER OS=Arabidopsis thaliana G... [more]
TT2_ARATH1.080e-1735.07Transcription factor TT2 OS=Arabidopsis thaliana G... [more]
MYB75_ARATH1.411e-1744.68Transcription factor MYB75 OS=Arabidopsis thaliana... [more]
MYB90_ARATH3.143e-1744.68Transcription factor MYB90 OS=Arabidopsis thaliana... [more]
MYB39_ARATH3.143e-1744.68Transcription factor MYB39 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-H06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702175 ID=EY702175; Name=EY702175; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGGCAACGTTGGCAACCAGAAGAAGACGCAATCTTGAAAG
CATACGTGAAGCAATATGGCCCCAAAGAATGGAACCTCATCTCACAACGC
ATGGGCAAAACCCTCAACCGTGACCCCAAATCTTGCCTCGAGCGCTGGAA
AAACTACCTCAAACCGGGCATCAAAAAGGGTTCTTTATCCCCAGAGGAGC
AATCTCTAGTCATTTCGTTGCAGGCCAAATACGGCAACAAGTGGAAGAAG
ATCGCGAGTGAAGTCCCCGGGAGAACGGCCAAGAGATTGGGAAAGTGGTG
GGAGGTTTTTAAGGAGAAGCAGTTGAAGCAGCTGCACAAGGAGAAGCAGA
GAAGGGAATATTCCGATCAGCAGCAGGAGGGGAATGTTCCGGTAGTGGGT
TTGGGTTCTGGTTCTTGTTCTTCGCCTGAGAAAGTCGCTCAGGGGAGATA
TGATCATATCTTAGAGACTTTTGCTGAGAAGTACGTGCAGCCTAAGCTTT
TCGCGATGCAAGCATTGAACTTGAATTTGAACCCGGTCCCTGCCAATGCT
ATTATGCCTAATCTACCACTTGGCGGTGCTGATCCTGAACCGGTTCTTTC
ACTTGGGTCCGGTCCTACGTGGATGAATAATCATAATCATAATCATCATA
CCAGTGGTTCATCTTTGACGTCTTCAACTTCATCTACTACTACAGCTTCT
CCTAGTGTGAGTCTGTCGCTTTCTCCATCTGAAACCGGGATTGAACTGGG
GGATATGAACCCTGTGGCCCGGNTCATGCCGGGTCCGCAAGTGGGTACTT
TGGTACAGTACTGAAAAGAGCTTGAAGAGGGGAGGCAAAGCTGGGTGCAG
CATAAAAAGGAGGCACTTNGGAGCTGAGCAGGCTGGAAGCAGCAGTGGAG
T
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