EY702175

Overview
NameEY702175
Unique NameEY702175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.361e-17
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  EED +L+  + +YG  +W+ +  R G  LNR  KSC  RW NYLKP IK+G L  +E  LV+ L    GN+W  IA  +PGRTA  +  +W
Sbjct:   13 WTTEEDILLRQCIDKYGEGKWHRVPLRTG--LNRCRKSCRLRWLNYLKPSIKRGKLCSDEVDLVLRLHKLLGNRWSLIAGRLPGRTANDVKNYW 104          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.001e-17
Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  EED++L+  + +YG  +W+ +  R G  LNR  KSC  RW NYLKP IK+G  S +E  L++ L    GN+W  IA  +PGRTA  +  +W
Sbjct:   13 WTAEEDSLLRQCIGKYGEGKWHQVPLRAG--LNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYW 104          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.144e-17
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W PEED  L  Y+ ++G   W+ + +  G  L R  KSC  RW NYL+P +K+G+ S +E+SL+I L A  GN+W +IA+ +PGRT   +  +W
Sbjct:   17 WSPEEDEKLLNYITRHGHGCWSSVPKLAG--LQRCGKSCRLRWINYLRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFW 108          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.144e-17
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  EED IL  YV+ +G   WN I+++ G  L R  KSC  RW NYL P + +G+ + +E+ L+I L    GN+W  IA  VPGRT  ++  +W
Sbjct:   17 WTVEEDKILMDYVRTHGQGHWNRIAKKTG--LKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYW 108          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.194e-16
Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  +ED  L AYVK +G  +W  + Q+ G  L R  KSC  RW NYL+P I++G++S +E+ L+I L    GN+W  IA  +PGRT   +  +W
Sbjct:   17 WTSKEDDALAAYVKAHGEGKWREVPQKAG--LRRCGKSCRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYW 108          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.194e-16
Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 2
Query:   17 RWQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            RW  EED IL  Y++  G   W  + +  G  L R  KSC  RW NYL+  +K+G+++PEE+ LV+ L +  GN+W  IA  +PGRT   +  +W
Sbjct:   16 RWTAEEDQILSNYIQSNGEGSWRSLPKNAG--LKRCGKSCRLRWINYLRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYW 108          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.194e-16
Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W PEED  L++++  YG   W  +  + G  L R+ KSC  RW NYL+PG+K+  +S EE+  +++  +  GNKW +IA  +PGRT   +  +W
Sbjct:   15 WSPEEDEKLRSFILSYGHSCWTTVPIKAG--LQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYW 106          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: GL1_ARATH (Trichome differentiation protein GL1 OS=Arabidopsis thaliana GN=GL1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.194e-16
Identity = 47/151 (31.13%), Postives = 71/151 (47.02%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWWEVFXXXXXXXXXXXXXRREYSDQQQEGNVPVVGLGSGSCSSPEKVAQGRYDHILETF 472
            W  EED IL  YV  +G  +WN I ++ G  L R  KSC  RW NYL P + KG+ + +E+ L+I L    GN+W  IA  VPGRT  ++  +W                +    D     ++ +      SC   +   +  Y++I ++F
Sbjct:   19 WTVEEDNILMDYVLNHGTGQWNRIVRKTG--LKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLVGDYSSAVKTTGEDDDSPPSLFITAATPSSCHHQQ---ENIYENIAKSF 164          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.560e-16
Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 2
Query:   17 RWQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            RW  EED +L  Y+ ++G   W  + +  G  L R  KSC  RW NYL+  +K+G++S EE+ ++I L A  GN+W  IAS +PGRT   +  +W
Sbjct:   16 RWTAEEDQLLANYIAEHGEGSWRSLPKNAG--LLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYW 108          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: GL1_ARALY (Trichome differentiation protein GL1 OS=Arabidopsis lyrata GN=GL1 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.560e-16
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  EED IL  YV  +G  +WN I ++ G  L R  KSC  RW NYL P + KG+ + +E+ L+I L    GN+W  IA  VPGRT  ++  +W
Sbjct:   19 WTVEEDNILMDYVLNHGTGQWNRIVRKTG--LKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYW 110          
The following BLAST results are available for this feature:
BLAST of EY702175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
MY113_ARATH5.361e-1744.68Transcription factor MYB113 OS=Arabidopsis thalian... [more]
MY114_ARATH7.001e-1743.62Transcription factor MYB114 OS=Arabidopsis thalian... [more]
MYB86_ARATH9.144e-1742.55Transcription factor MYB86 OS=Arabidopsis thaliana... [more]
MYB23_ARATH9.144e-1742.55Transcription factor MYB23 OS=Arabidopsis thaliana... [more]
MYBC_MAIZE1.194e-1642.55Anthocyanin regulatory C1 protein OS=Zea mays GN=C... [more]
MYB12_ARATH1.194e-1641.05Transcription factor MYB12 OS=Arabidopsis thaliana... [more]
LAF1_ARATH1.194e-1639.36Transcription factor LAF1 OS=Arabidopsis thaliana ... [more]
GL1_ARATH1.194e-1631.13Trichome differentiation protein GL1 OS=Arabidopsi... [more]
MYBP_MAIZE1.560e-1641.05Myb-related protein P OS=Zea mays GN=P PE=2 SV=1[more]
GL1_ARALY1.560e-1643.62Trichome differentiation protein GL1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-H06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702175 ID=EY702175; Name=EY702175; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGGCAACGTTGGCAACCAGAAGAAGACGCAATCTTGAAAG
CATACGTGAAGCAATATGGCCCCAAAGAATGGAACCTCATCTCACAACGC
ATGGGCAAAACCCTCAACCGTGACCCCAAATCTTGCCTCGAGCGCTGGAA
AAACTACCTCAAACCGGGCATCAAAAAGGGTTCTTTATCCCCAGAGGAGC
AATCTCTAGTCATTTCGTTGCAGGCCAAATACGGCAACAAGTGGAAGAAG
ATCGCGAGTGAAGTCCCCGGGAGAACGGCCAAGAGATTGGGAAAGTGGTG
GGAGGTTTTTAAGGAGAAGCAGTTGAAGCAGCTGCACAAGGAGAAGCAGA
GAAGGGAATATTCCGATCAGCAGCAGGAGGGGAATGTTCCGGTAGTGGGT
TTGGGTTCTGGTTCTTGTTCTTCGCCTGAGAAAGTCGCTCAGGGGAGATA
TGATCATATCTTAGAGACTTTTGCTGAGAAGTACGTGCAGCCTAAGCTTT
TCGCGATGCAAGCATTGAACTTGAATTTGAACCCGGTCCCTGCCAATGCT
ATTATGCCTAATCTACCACTTGGCGGTGCTGATCCTGAACCGGTTCTTTC
ACTTGGGTCCGGTCCTACGTGGATGAATAATCATAATCATAATCATCATA
CCAGTGGTTCATCTTTGACGTCTTCAACTTCATCTACTACTACAGCTTCT
CCTAGTGTGAGTCTGTCGCTTTCTCCATCTGAAACCGGGATTGAACTGGG
GGATATGAACCCTGTGGCCCGGNTCATGCCGGGTCCGCAAGTGGGTACTT
TGGTACAGTACTGAAAAGAGCTTGAAGAGGGGAGGCAAAGCTGGGTGCAG
CATAAAAAGGAGGCACTTNGGAGCTGAGCAGGCTGGAAGCAGCAGTGGAG
T
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