EY702157

Overview
NameEY702157
Unique NameEY702157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702157 vs. ExPASy Swiss-Prot
Match: PCNA_CRIGR (Proliferating cell nuclear antigen OS=Cricetulus griseus GN=PCNA PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.466e-45
Identity = 93/164 (56.71%), Postives = 126/164 (76.83%), Query Frame = 3
Query:   63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGF*HYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDNIADFETKLMDIDSEHLGIPEAVNLAIVRSASTDSARN*TELVSIW--VEQSCAR 548
            M E RLVQGS+LKKVLEA+K+L+N+A +D S+ G +LQ+MDSSHV+LV L LRSEGF  YRCDRN++MG+NL ++SK+LKCAGN+DIITL+A+D +DT+  +FE+P Q+ ++D+E KLMD+D E LGIPE     +V+  S + AR   +L  I   V  SCA+
Sbjct:    1 MFEARLVQGSILKKVLEALKDLINEACWDISSGGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAK 164          
BLAST of EY702157 vs. ExPASy Swiss-Prot
Match: PCNA_COTJA (Proliferating cell nuclear antigen OS=Coturnix coturnix japonica GN=PCNA PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.466e-45
Identity = 93/164 (56.71%), Postives = 125/164 (76.22%), Query Frame = 3
Query:   63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGF*HYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDNIADFETKLMDIDSEHLGIPEAVNLAIVRSASTDSARN*TELVSIW--VEQSCAR 548
            M E RLVQGS+LK+VLEA+K+L+ +A +D  + G SLQ+MDSSHV+LV L LRSEGF  YRCDRNI+MG+NLN++SK+LKCAGN+DIITL+A+D +DT+  +FE+P Q+ ++D+E KLMD+D E LGIPE     +V+  S + AR   +L  I   V  SCA+
Sbjct:    1 MFEARLVQGSVLKRVLEALKDLITEACWDLGSGGISLQSMDSSHVSLVQLTLRSEGFDTYRCDRNIAMGVNLNSMSKILKCAGNEDIITLRAEDNADTLALVFETPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSAEFARICRDLSHIGDAVVISCAK 164          
BLAST of EY702157 vs. ExPASy Swiss-Prot
Match: PCNA_CHICK (Proliferating cell nuclear antigen OS=Gallus gallus GN=PCNA PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.466e-45
Identity = 93/164 (56.71%), Postives = 125/164 (76.22%), Query Frame = 3
Query:   63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGF*HYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDNIADFETKLMDIDSEHLGIPEAVNLAIVRSASTDSARN*TELVSIW--VEQSCAR 548
            M E RLVQGS+LK+VLEA+K+L+ +A +D  + G SLQ+MDSSHV+LV L LRSEGF  YRCDRNI+MG+NLN++SK+LKCAGN+DIITL+A+D +DT+  +FE+P Q+ ++D+E KLMD+D E LGIPE     +V+  S + AR   +L  I   V  SCA+
Sbjct:    1 MFEARLVQGSVLKRVLEALKDLITEACWDLGSGGISLQSMDSSHVSLVQLTLRSEGFDTYRCDRNIAMGVNLNSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSAEFARICRDLSHIGDAVVISCAK 164          
BLAST of EY702157 vs. ExPASy Swiss-Prot
Match: PCNA_RAT (Proliferating cell nuclear antigen OS=Rattus norvegicus GN=Pcna PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.526e-45
Identity = 92/164 (56.10%), Postives = 126/164 (76.83%), Query Frame = 3
Query:   63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGF*HYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDNIADFETKLMDIDSEHLGIPEAVNLAIVRSASTDSARN*TELVSIW--VEQSCAR 548
            M E RL+QGS+LKKVLEA+K+L+N+A +D S+ G +LQ+MDSSHV+LV L LRSEGF  YRCDRN++MG+NL ++SK+LKCAGN+DIITL+A+D +DT+  +FE+P Q+ ++D+E KLMD+D E LGIPE     +V+  S + AR   +L  I   V  SCA+
Sbjct:    1 MFEARLIQGSILKKVLEALKDLINEACWDISSGGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAK 164          
BLAST of EY702157 vs. ExPASy Swiss-Prot
Match: PCNA_MOUSE (Proliferating cell nuclear antigen OS=Mus musculus GN=Pcna PE=1 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 5.911e-45
Identity = 91/164 (55.49%), Postives = 126/164 (76.83%), Query Frame = 3
Query:   63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGF*HYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDNIADFETKLMDIDSEHLGIPEAVNLAIVRSASTDSARN*TELVSIW--VEQSCAR 548
            M E RL+QGS+LKKVLEA+K+L+N+A +D S+ G +LQ+MDSSHV+LV L LRSEGF  YRCDRN++MG+NL ++SK+LKCAGN+DIITL+A+D +DT+  +FE+P Q+ ++D+E KLMD+D E LGIPE     +++  S + AR   +L  I   V  SCA+
Sbjct:    1 MFEARLIQGSILKKVLEALKDLINEACWDVSSGGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVIKMPSGEFARICRDLSHIGDAVVISCAK 164          
BLAST of EY702157 vs. ExPASy Swiss-Prot
Match: PCNA_DICDI (Proliferating cell nuclear antigen OS=Dictyostelium discoideum GN=pcna PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.354e-44
Identity = 81/147 (55.10%), Postives = 112/147 (76.19%), Query Frame = 3
Query:   63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGF*HYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKA-DDGSDTVTFMFESPTQDNIADFETKLMDIDSEHLGIPEAVNLAIVRSASTDSAR 500
            M E RL+Q SLLKK+LE+IK+LV  ANFDCS  G SLQAMD +HV L+ L+LR+EGF  Y CDR++S+G++L ++SK+LKCAGNDD +T++A D+ SDTVTF+FESP  D ++DFE KL+DI +E   I ++   A+++  S +  R
Sbjct:    1 MFEARLLQASLLKKILESIKDLVESANFDCSPEGISLQAMDGTHVTLINLVLRNEGFETYNCDRSLSLGLSLVSLSKILKCAGNDDTLTIRARDNESDTVTFVFESPKNDRVSDFEIKLIDIKNEQYSIRKSDYSAVIKMPSAELQR 147          

HSP 2 Score: 35.8094 bits (81), Expect = 2.354e-44
Identity = 31/100 (31.00%), Postives = 46/100 (46.00%), Query Frame = 2
Query:  500 KLNRTCQHL---GGTVVCSCTKEG-----GGSSPTHVIVVLRISRSRKIIQADNP-EEVSISEMFDPVQLTFGLRYIEFFEMMPPLAKIVTTVLSSDVKV 772
            +L R C+ L   G  V  S  KEG      G S +  I +   S S      D P E+ ++ E  +PV L F L+++  F    PL+ +VT  +S  + V
Sbjct:  144 ELQRICRDLSIIGEIVTISANKEGVKFSVSGDSGSGNITIKPTSDS------DVPAEQATVIESKEPVVLNFALKFLSNFTKATPLSPMVTLSMSEGIPV 237          
BLAST of EY702157 vs. ExPASy Swiss-Prot
Match: PCNA_ANGJA (Proliferating cell nuclear antigen OS=Anguilla japonica GN=pcna PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.934e-44
Identity = 91/164 (55.49%), Postives = 126/164 (76.83%), Query Frame = 3
Query:   63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGF*HYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDNIADFETKLMDIDSEHLGIPEAVNLAIVRSASTDSARN*TELVSIW--VEQSCAR 548
            M E RLVQGS+LKKVLEA+K+L+ +A +D S++G SLQ+MDSSHV+LV L LRS+GF  YRCDRN+++G++LN++SKMLKCAGN+DIITL+A+D +DT+  +FE+  Q+ ++D+E KLMD+D E LGIPE     +V+  S + AR   +L  I   V  SCA+
Sbjct:    1 MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRSDGFDSYRCDRNLALGVSLNSMSKMLKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAK 164          
BLAST of EY702157 vs. ExPASy Swiss-Prot
Match: PCNA_XENLA (Proliferating cell nuclear antigen OS=Xenopus laevis GN=pcna PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.115e-43
Identity = 90/164 (54.88%), Postives = 126/164 (76.83%), Query Frame = 3
Query:   63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGF*HYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDNIADFETKLMDIDSEHLGIPEAVNLAIVRSASTDSARN*TELVSIW--VEQSCAR 548
            M E RLVQGS+LKKVLEA+K+L+++A +D +++G SLQ+MDSSHV+LV L LRS+GF  YRCDRN S+G+ ++++SK+LKCA +DDIITL+A+D +DTVT +FESP Q+ ++D+E KLMD+D E LGIPE     +++  S + AR   +L  I   V  SCA+
Sbjct:    1 MFEARLVQGSILKKVLEALKDLIDEACWDITSSGISLQSMDSSHVSLVQLTLRSDGFDTYRCDRNQSIGVKMSSMSKILKCAASDDIITLRAEDNADTVTMVFESPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVIKMPSGEFARICRDLSQIGDAVVISCAK 164          
BLAST of EY702157 vs. ExPASy Swiss-Prot
Match: PCNA_HAPBU (Proliferating cell nuclear antigen OS=Haplochromis burtoni GN=pcna PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 90/164 (54.88%), Postives = 125/164 (76.22%), Query Frame = 3
Query:   63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGF*HYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDNIADFETKLMDIDSEHLGIPEAVNLAIVRSASTDSARN*TELVSIW--VEQSCAR 548
            M E RLVQGS+LKKVLEA+K+L+ +A +D S++G SLQ+MDSSHV+LV L LR +GF  YRCDRN++MG+NL+++SK+LKCAGN+DIITL+A+D +DT+  +FE+  Q+ ++D+E KLMD+D E LGIPE     +V+  S + AR   +L  I   V  SCA+
Sbjct:    1 MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSYRCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAK 164          
BLAST of EY702157 vs. ExPASy Swiss-Prot
Match: PCNA_DANRE (Proliferating cell nuclear antigen OS=Danio rerio GN=pcna PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 90/164 (54.88%), Postives = 125/164 (76.22%), Query Frame = 3
Query:   63 MLELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGF*HYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDNIADFETKLMDIDSEHLGIPEAVNLAIVRSASTDSARN*TELVSIW--VEQSCAR 548
            M E RLVQGS+LKKVLEA+K+L+ +A +D S++G SLQ+MDSSHV+LV L LRS+GF  YRCDRN++MG+NL+++SK+LKCAGN+DIITL+A+D +D +  +FE+  Q+ ++D+E KLMD+D E LGIPE     +V+  S + AR   +L  I   V  SCA+
Sbjct:    1 MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRSDGFDSYRCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADALALVFETLNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAK 164          
The following BLAST results are available for this feature:
BLAST of EY702157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PCNA_CRIGR3.466e-4556.71Proliferating cell nuclear antigen OS=Cricetulus g... [more]
PCNA_COTJA3.466e-4556.71Proliferating cell nuclear antigen OS=Coturnix cot... [more]
PCNA_CHICK3.466e-4556.71Proliferating cell nuclear antigen OS=Gallus gallu... [more]
PCNA_RAT4.526e-4556.10Proliferating cell nuclear antigen OS=Rattus norve... [more]
PCNA_MOUSE5.911e-4555.49Proliferating cell nuclear antigen OS=Mus musculus... [more]
PCNA_DICDI2.354e-4455.10Proliferating cell nuclear antigen OS=Dictyosteliu... [more]
PCNA_ANGJA2.934e-4455.49Proliferating cell nuclear antigen OS=Anguilla jap... [more]
PCNA_XENLA1.115e-4354.88Proliferating cell nuclear antigen OS=Xenopus laev... [more]
PCNA_HAPBU1.456e-4354.88Proliferating cell nuclear antigen OS=Haplochromis... [more]
PCNA_DANRE1.456e-4354.88Proliferating cell nuclear antigen OS=Danio rerio ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-F12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702157 ID=EY702157; Name=EY702157; organism=Citrus sinensis; type=EST; length=887bp
CAAGCTTTCCCTTTCTATCTTTCAAACCCTAACCCTAATTTCCCAAGAAA
CTCGCAGCAAAAATGCTTGAGCTAAGGCTAGTTCAAGGATCCCTTCTCAA
GAAAGTGCTGGAGGCCATCAAGGAGCTGGTCAACGATGCCAACTTTGACT
GCTCGGCCACCGGTTTCTCTCTTCAAGCCATGGACTCCAGCCACGTGGCG
CTGGTGGCCCTGCTGCTCAGATCGGAAGGCTTCTAGCACTACCGCTGTGA
CCGGAATATCTCTATGGGAATGAATCTCAATAACGTGTCCAAGATGCTTA
AGTGCGCTGGCAACGATGACATCATCACTCTCAAGGCCGACGACGGCAGC
GATACCGTCACTTTCATGTTTGAAAGTCCCACTCAAGATAACATTGCTGA
CTTCGAGACGAAACTGATGGACATTGATAGTGAGCATCTTGGCATACCGG
AGGCTGTAAACCTTGCCATTGTAAGGAGTGCTTCAACTGACTCTGCTAGA
AATTGAACAGAACTTGTCAGCATCTGGGTGGAACAGTCGTGTGCTCGTGC
ACAAAGGAAGGTGGTGGAAGTTCTCCTACACACGTGATAGTGGTGCTGCG
AATATCGCGCTCACGCAAAATAATACAGGCCGACAACCCAGAAGAAGTAT
CCATTAGTGAAATGTTTGACCCAGTGCAATTGACTTTTGGCTTGAGATAC
ATCGAATTTTTTGAAATGATGCCGCCCCTGGCGAAAATCGTAACTACAGT
CTTATCCTCAGACGTGAAAGTTGCGGGTCCAATACATGAATTGCTAGAGA
GGGGATATTAAATTCTCCCGGGTACTCAAAATAAGAAGAATGCCGATTTG
AGCCCCTCCGGATGCTAACGGGCTGTTTCCCAGCTCG
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