EY702154

Overview
NameEY702154
Unique NameEY702154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: ERF1_LOXST (Eukaryotic peptide chain release factor subunit 1 OS=Loxodes striatus GN=eRF1 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.312e-69
Identity = 121/212 (57.08%), Postives = 161/212 (75.94%), Query Frame = 1
Query:   10 RLKLYNKVPPNGLVLYTGTVVTEDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGK 642
            +L +  ++PPNGL+LY G  + ED K EK++    EP + IN + +LC+N F+T+ L ++L+  DKFGFI+MDGNG+LFGTL GN RE+LHKF VDLPKKHGRGGQSALRFARLR+EKRHNY++K AE+A   FI     + NV G++LAG+A+FK EL+ ++  D R++ K++ ++DV+YGGENGFNQAIELS   L NVK I+ K LI K
Sbjct:   78 KLSVIKQIPPNGLILYCGKFIGEDEKTEKQILEVLEPLRAINTTFFLCENTFYTQPLRDMLQEQDKFGFIIMDGNGSLFGTLQGNAREILHKFDVDLPKKHGRGGQSALRFARLRLEKRHNYMKKVAEVAINCFIQ--NDRVNVLGIVLAGAAEFKNELAANEYLDQRIRAKVVTIIDVNYGGENGFNQAIELSQVQLQNVKFIKEKNLITK 287          

HSP 2 Score: 31.9574 bits (71), Expect = 5.312e-69
Identity = 13/43 (30.23%), Postives = 26/43 (60.47%), Query Frame = 2
Query:  650 DEINHDTGKYVFGVDDTLKVPKLGAAKILIGWEKLDSTYMYLK 778
            +E+  ++    +G+ DT+K  ++GA + L+ WE L+  +  LK
Sbjct:  290 EEVAQNSITVCYGLTDTMKALEMGAVETLVIWENLEFIWFKLK 332          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_PYRKO (Peptide chain release factor subunit 1 OS=Pyrococcus kodakaraensis GN=prf1 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.530e-32
Identity = 72/215 (33.49%), Postives = 120/215 (55.81%), Query Frame = 1
Query:    1 ALYRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            A+  LKLY + P NGL L+ G V  ++G          P +P+N  LY CD  F TE L E+L   D +G I ++ N    G L G   EV+ + T ++P K   GGQSA R+ R+R ++ H ++++  E A + F+ P   +  + G+I+ G    K E  + D     L+ K++ VVD+SY GE G  + +E +++IL + ++++ ++LI ++
Sbjct:   72 AMQHLKLYKQTPENGLALFVGNVSEQEGVSDIKLWAIVPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVIDELTSNVPGKTRAGGQSARRYERIREQETHEFMKRIGEHANKAFL-PLLEKGELRGIIIGGPGPTKEEFVEGDYLHHELRKKVIGVVDISYHGEYGLRELVEKASDILKDHEAVKERQLIQEF 285          

HSP 2 Score: 21.557 bits (44), Expect = 3.530e-32
Identity = 13/33 (39.39%), Postives = 20/33 (60.61%), Query Frame = 2
Query:  665 DTGKYVFGVDDTLKVPKLGAA-KILI--GWEKL 754
            DTG   +G  +  K  +LGA  K+LI  G++K+
Sbjct:  292 DTGMITYGEKEVRKALELGAVDKLLISEGYDKV 324          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_PYRAB (Peptide chain release factor subunit 1 OS=Pyrococcus abyssi GN=prf1 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.835e-32
Identity = 74/215 (34.42%), Postives = 118/215 (54.88%), Query Frame = 1
Query:    1 ALYRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            A+  LKLY + P NGL L+ G V   +G          P +P+N  LY CD  F TE L E+L   D +G I ++ N    G L G   EVL + T ++P K   GGQSA R+ R+R ++ H ++++  E A + F+ P   +  + G+I+ G    K +  + D     L+ KI+ VVD+SY GE G  + +E +++IL + + I+ K+L+ ++
Sbjct:   75 AMQHLKLYKQTPENGLALFVGNVSEMEGNTDIRLWAIVPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVLDELTSNVPGKTRAGGQSARRYERIREQETHEFMKRIGEHANRVFL-PLLEKGELKGIIVGGPGPTKEDFVEGDYLHHELKKKIIGVVDISYHGEYGLRELVEKASDILRDHEVIREKKLVNEF 288          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_THESM (Peptide chain release factor subunit 1 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=prf1 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.796e-32
Identity = 70/215 (32.56%), Postives = 117/215 (54.42%), Query Frame = 1
Query:    1 ALYRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            A+  LKLY + P  GL L+ G V  ++G          P +P+N  LY CD  F TE L E+L   D +G I ++ N    G L G   EV+   T ++P K   GGQSA R+ R+R ++ H ++++  E A+  F+ P   +  + G+I+ G    K E  + +     L+ +IL VVD+SY GE G  + +E +++IL   ++++ ++L+ ++
Sbjct:   72 AMQHLKLYRQTPETGLALFVGNVSEQEGVSDIRVFAIVPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGILRGKKIEVIEDLTSNVPGKTRAGGQSARRYERIREQEAHEFMKRIGEHASSVFL-PLLEKDELKGIIIGGPGPTKEEFVEGEYLHHELRKRILGVVDISYHGEYGLRELVEKASDILREHEAVKERKLVQQF 285          

HSP 2 Score: 22.7126 bits (47), Expect = 7.796e-32
Identity = 12/31 (38.71%), Postives = 16/31 (51.61%), Query Frame = 2
Query:  665 DTGKYVFGVDDTLKVPKLGAAKILIGWEKLD 757
            DTG   +G  +  K  +LGA  IL+  E  D
Sbjct:  292 DTGLITYGEKEVRKALELGAVDILLLSEGYD 322          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_THEON (Peptide chain release factor subunit 1 OS=Thermococcus onnurineus (strain NA1) GN=prf1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.953e-32
Identity = 73/212 (34.43%), Postives = 115/212 (54.25%), Query Frame = 1
Query:    1 ALYRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLI 636
            A+  LKLY K P NGL L+ G V  ++G          P +P+   LY CD  F TE L E+L   D +G I ++ N    G L G   EV+   T ++P K   GGQSA R+ R+R ++ H ++++ AE A + F+ P   +  + G+I+ G    K E    D     L+ K++ VVD+SY GE G  + +E +++IL   ++++ ++LI
Sbjct:   72 AMQHLKLYRKTPENGLALFVGNVSEQEGVSDIKLWAIVPPEPLKVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVIDDLTSNVPGKTRAGGQSARRYERIREQETHEFMKRIAEHAAKAFL-PLLEKGELKGIIIGGPGPTKEEFVDGDYLHHELRKKVIGVVDISYHGEYGLRELVEKASDILSEHEAVKERKLI 282          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_PYRHO (Peptide chain release factor subunit 1 OS=Pyrococcus horikoshii GN=prf1 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.698e-31
Identity = 74/215 (34.42%), Postives = 118/215 (54.88%), Query Frame = 1
Query:    1 ALYRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            A+  LKLY + P NGL L+ G V   +G          P +P+N  LY CD  F TE L E+L   D +G I ++ N    G L G   E+L + T ++P K   GGQSA R+ R+R ++ H ++++  E A + F+ P   +  + G+I+ G    K E  + +     L+ KIL VVD+SY GE G  + +E +++IL + + I+ K+L+ ++
Sbjct:   75 AMQHLKLYKQTPENGLALFVGNVSEIEGNTDIRLWAIIPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIELLDELTSNVPGKTRAGGQSARRYERIREQETHEFMKRIGEHANRAFL-PLLEKGELKGIIIGGPGPTKEEFVEGEYLHHELKKKILGVVDISYHGEYGLRELVEKASDILRDHEVIREKKLVNEF 288          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_PYRFU (Peptide chain release factor subunit 1 OS=Pyrococcus furiosus GN=prf1 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.242e-31
Identity = 72/215 (33.49%), Postives = 115/215 (53.49%), Query Frame = 1
Query:    1 ALYRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            A+  LKLY + P NGL L+ G V   +G          P +P+N  LY CD  F TE L E+L   + +G I ++ N    G L G   EVL + T ++P K   GGQSA R+ R+R ++ H ++++  E A + F+ P      + G+I+ G    K E  + D     L+ KI+ +VD+SY GE G  + +  +A+IL + + I+ + L+ ++
Sbjct:   75 AMQHLKLYKQTPENGLALFVGNVSEMEGVTDIRLWAIIPPEPLNVRLYRCDQTFVTEPLEEMLRVKEAYGLITVEKNEATIGILRGKRIEVLDELTSNVPGKTRAGGQSARRYERIREQETHEFMKRIGEHANRIFL-PLLESGELKGIIVGGPGPTKEEFVEGDYLHHELKKKIIGIVDISYHGEYGLRELVAKAADILRDHEVIRERNLVNEF 288          

HSP 2 Score: 23.8682 bits (50), Expect = 2.242e-31
Identity = 14/44 (31.82%), Postives = 21/44 (47.73%), Query Frame = 2
Query:  647 LDEINHDTGKYVFGVDDTLKVPKLGAAKILIGWEKLDSTYMYLK 778
            L  I  DTG   +G  +  K  +LGA   L+  E  D   +++K
Sbjct:  289 LKHIVKDTGLATYGEREVRKALELGAVDTLLISEGYDKVRVHVK 332          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_METKA (Peptide chain release factor subunit 1 OS=Methanopyrus kandleri GN=prf1 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.182e-30
Identity = 78/215 (36.28%), Postives = 113/215 (52.56%), Query Frame = 1
Query:    4 LYRLKLYNKVPPNGLVLYTGTVVTEDG-KEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            + RLK+  + P NGLV+  GTV  +DG KEK V    EP +P++  +Y CD+KF+ E L E LE  D +G +VMD      G + G   E + + T D+P KH  GGQS  RF RL     H + +K  E A + F        ++ G+I+ G    K E    D     L+ K+L VVDV    E+G  +A+  + E L   + ++ KRL+ K+
Sbjct:   74 MQRLKMVGETPENGLVVLVGTV--QDGTKEKMVAELIEPPEPVDRFIYRCDSKFYLEPLKEYLEEKDVYGILVMDRREATIGLVKGKRIEPVKRLTSDVPGKHKAGGQSQRRFDRLIEHAAHEFYQKVGEAAREAF----EDVKDLKGIIVGGPGPTKEEFLDGDYLPKDLKEKVLTVVDVGNTDESGLREALNKAEEALKEAELVREKRLVRKF 282          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_ARCFU (Peptide chain release factor subunit 1 OS=Archaeoglobus fulgidus GN=prf1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.038e-29
Identity = 74/214 (34.58%), Postives = 118/214 (55.14%), Query Frame = 1
Query:    4 LYRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            L RLK + K P NG+V+ +G VV  +GKEK +T   EP +P+    Y CD+KF+ + L E+L     +G IV+D      G L G   EVL   T  +P KH +GGQS++RF RLR    H + +K  E+A++  +     +  + G+++ G +  K E  + +     LQ K+L + DV Y  E+G  + +E + ++L  V  I+ K L+ ++
Sbjct:   71 LNRLKHFRKPPENGMVIISG-VVNINGKEKHITEIIEPPEPVPLYKYHCDSKFYLDPLKEMLTEKKLYGLIVLDRREATVGLLKGKRIEVLDWDTSMVPGKHRQGGQSSVRFERLREIAIHEFYKKVGEMASEALL---PYKDKLIGILIGGPSPTKEEFYEGEYLHHELQKKVLGLFDVGYTDESGLYELVEKAKDVLQEVDIIREKNLMQRF 280          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_METTH (Peptide chain release factor subunit 1 OS=Methanobacterium thermoautotrophicum GN=prf1 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.112e-28
Identity = 71/215 (33.02%), Postives = 111/215 (51.63%), Query Frame = 1
Query:    4 LYRLKLYNKVPPNGLVLYTGTVVTED-GKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            + RLKL+ K P  GLV++ G V     G EK  T  FEP +PI   +Y C+++F+ E L E+LE  + +G  V+D       TL G   ++L   T  +P KH  GGQS  RF RL     H ++++  E   + F+       ++ G+IL G    K E    D     L+ K++  VD SY GE G  + I+ S ++L  +  ++ K+L+ ++
Sbjct:   74 MQRLKLFPKPPEKGLVMFVGMVPRGGPGTEKMETYVFEPPEPIKTYIYHCNSEFYLEPLREMLEEKETYGLAVLDRKEATIATLKGKRIDILKTLTSGVPGKHKAGGQSQRRFDRLIDLAAHEFLKRIGEHMNEAFL----QIDDLKGIILGGPGHTKEEFLNGDYLHHELKKKVITTVDTSYTGEFGIREVIDKSMDVLSEIDVMREKKLVQRF 284          
The following BLAST results are available for this feature:
BLAST of EY702154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
ERF1_LOXST5.312e-6957.08Eukaryotic peptide chain release factor subunit 1 ... [more]
RF1_PYRKO3.530e-3233.49Peptide chain release factor subunit 1 OS=Pyrococc... [more]
RF1_PYRAB5.835e-3234.42Peptide chain release factor subunit 1 OS=Pyrococc... [more]
RF1_THESM7.796e-3232.56Peptide chain release factor subunit 1 OS=Thermoco... [more]
RF1_THEON9.953e-3234.43Peptide chain release factor subunit 1 OS=Thermoco... [more]
RF1_PYRHO1.698e-3134.42Peptide chain release factor subunit 1 OS=Pyrococc... [more]
RF1_PYRFU2.242e-3133.49Peptide chain release factor subunit 1 OS=Pyrococc... [more]
RF1_METKA4.182e-3036.28Peptide chain release factor subunit 1 OS=Methanop... [more]
RF1_ARCFU6.038e-2934.58Peptide chain release factor subunit 1 OS=Archaeog... [more]
RF1_METTH5.112e-2833.02Peptide chain release factor subunit 1 OS=Methanob... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-F09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702154 ID=EY702154; Name=EY702154; organism=Citrus sinensis; type=EST; length=894bp
GCTCTTTACAGGCTGAAGCTATATAACAAGGTTCCTCCCAATGGGCTGGT
GCTTTATACTGGAACAGTTGTTACTGAGGATGGCAAGGAAAAGAAAGTGA
CAATTGACTTTGAACCTTTCAAGCCTATTAATGCATCGTTGTATCTCTGT
GATAACAAGTTTCACACTGAAGCCTTGAATGAACTCTTAGAATCTGATGA
TAAATTTGGGTTTATTGTCATGGATGGAAATGGCACCCTATTTGGCACAT
TAAGTGGAAACACAAGAGAGGTGCTTCATAAGTTTACTGTTGATCTGCCG
AAGAAGCATGGAAGAGGAGGGCAGTCAGCTCTTCGTTTTGCTCGTCTTCG
GATGGAGAAACGGCACAACTATGTGAGGAAGACAGCAGAGCTTGCTACAC
AGTTCTTTATCAATCCTGCTACCAGTCAGCCCAATGTGTCTGGATTAATT
CTTGCTGGTTCTGCTGATTTCAAAACTGAGCTGAGCCAGTCTGATATGTT
TGATCCTCGTTTACAACCCAAGATATTGAATGTTGTTGATGTTTCTTATG
GTGGGGAAAATGGTTTTAACCAAGCAATTGAGTTGTCTGCAGAAATCTTA
ATCAATGTGAAGTCCATACAATAAAAACGTTTGATTGGAAAATACTCTTG
ACGAGATTAACCATGACACTGGAAAATATGTGTTTGGTGTTGATGACACT
TTGAAGGTTCCGAAATTGGGAGCTGCAAAAATCCTTATTGGGTGGGAAAA
ACTGGATTCAACATATATGTACTTGAAAACAGTGCTACTGCGTGAATTGT
TATAAAGAACTTAACAAAGACCAGAAGCCAATCAGAGCAATTTCCCCAAG
AAACCACATCTGCTCATTTGAAGTTCCAGAAAAAAATTTTTTAC
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