EY702154

Overview
NameEY702154
Unique NameEY702154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_METST (Peptide chain release factor subunit 1 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=prf1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.639e-24
Identity = 61/215 (28.37%), Postives = 109/215 (50.70%), Query Frame = 1
Query:    4 LYRLKLYNKVPPNGLVLYTGTVVTED-GKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            + RLKL+ K P  GLV++ G +     G EK  T  F+P + +    Y CD++F  E L +++E  + +G +V+D   +   TL G   +++   T  +P KH  GGQS  RF R+     H ++++      + F+     +  + G+++ G    K +    +     +  KI+N+VD SY G+ G  + I+ SA+ L  +  +Q K+ + K+
Sbjct:   74 IQRLKLFPKPPEKGLVMFVGMIPKGGPGTEKMETYVFQPPEAVQTYTYHCDSQFFVEPLKQIIEYKEVYGVVVLDRKESTIATLRGKRIDIIKHLTSGVPGKHKAGGQSQRRFDRVIELAAHEFLKRIGRHVDEAFL---PLKDELKGVLIGGPGHTKNDFVDGEYIHYEIHDKIINIVDTSYTGDFGIREVIDESADTLDEMDIMQEKKFMRKF 285          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF11_METAC (Peptide chain release factor subunit 1-1 OS=Methanosarcina acetivorans GN=prf11 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.976e-24
Identity = 61/199 (30.65%), Postives = 101/199 (50.75%), Query Frame = 1
Query:    4 LYRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEIL 600
            L RL+  +KVP NG+V +TG V     K    +    P +PI    Y CD+ F+ E L ++L+    FG +V+D      G L G   +     T  +P K  +GGQSA RF +LR+   H++ ++  + A++ F+  A    ++ G+++ G +  K E    +     LQ KIL + D +Y  E+G ++ +  + E L
Sbjct:   74 LSRLRYLDKVPENGIVYFTGAVDIGANKTSMESEVIIPPEPITVYKYHCDSSFYLEPLEDMLKDKSTFGLLVLDRREATIGLLVGKRIQAFRNLTSTVPGKQRKGGQSAHRFQQLRLIAIHDFYKRIGDAASEIFM--AVDHKDLKGVLIGGPSPTKEEFYGGEFLHHELQKKILGLFDTAYTDESGLSELVNAAGEKL 270          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_HALMA (Peptide chain release factor subunit 1 OS=Haloarcula marismortui GN=prf1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.702e-23
Identity = 69/211 (32.70%), Postives = 108/211 (51.18%), Query Frame = 1
Query:   10 RLKLYNKVPP-NGLVLYTGTVVTEDGKEKKVTIDFE-PFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLI 636
            RL+ Y+  PP NGLV+++G   T  G+   VT   E P  PI +  Y CD++F TE L  +L     FG IV+D      G L G   E +   +  +P K  +GGQSA RFARLR+E   N+ ++ A +A   F+     +  + G+++ G +  K E    D     LQ  +L   DV+Y  E+G    ++ + ++L   + ++ K L+
Sbjct:   81 RLRYYDVRPPDNGLVVFSGAFDTGGGRTDMVTKVLESPPDPIESFRYHCDSEFLTEPLEHMLADKGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPGKQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFV---ADRHEIDGILVGGPSPTKDEFLDGDYLHHELQDMVLGKFDVAYTDESGLYDLVDAADDVLAEHEMLRDKELM 288          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_METJA (Peptide chain release factor subunit 1 OS=Methanocaldococcus jannaschii GN=prf1 PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.223e-23
Identity = 64/215 (29.77%), Postives = 108/215 (50.23%), Query Frame = 1
Query:    4 LYRLKLYNKVPPNGLVLYTGTVVTED-GKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            L RLKL  +    G+V++ G V     G EK  T   EP +PI   +Y CD++F+ E L E LE  D +G I++D N      + G    +L K T  +P K   GGQSA R  RL     H ++++  + A + F+ P   +  + G+++ G    K E  + D     L+  +L+  D+ Y  E G  + +E +A +L +V+ ++ +  + ++
Sbjct:   74 LQRLKLLKEPLEKGVVIFAGMVPRSGPGTEKMETYVIEPPEPIKTYIYRCDSEFYLEPLEEFLEDKDAYGVILVDRNEATIALVKGRNINILKKLTSGVPGKFKAGGQSARRLERLIDLAAHEFLQRVGQKANEQFL-PLLQEKKLRGILVGGPGHTKNEFVEGDYLHHELKKIVLDTFDLCYTEEFGIRELLEKAAPLLKDVELMKEREAVQRF 287          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_HALWD (Peptide chain release factor subunit 1 OS=Haloquadratum walsbyi (strain DSM 16790) GN=prf1 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.903e-23
Identity = 65/199 (32.66%), Postives = 104/199 (52.26%), Query Frame = 1
Query:   10 RLKLYNKVPP-NGLVLYTGTVVTEDGKEKKVTIDFE-PFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEIL 600
            RL+ Y+  PP NG+VL++G V T  G+   VT   E P +P+ +  Y CD+ F T+ L ++L     FG IV+D      G L G   E +   +  +P K  +GGQSA RFARLR+E   N+ ++ A +A   F+     +  + G+++ G +  K E    D     L   ++   DVSY  E+G +  ++ + ++L
Sbjct:   81 RLRYYDTYPPDNGIVLFSGAVSTGGGQTTMVTRSLESPPEPVQSFRYHCDSDFLTDPLEDMLADKGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPGKQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFV---PKRHEIDGVLVGGPSPTKDEFLDGDYLHHELGDVVVGKFDVSYTDESGLHDLVDSAQDVL 276          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF12_METAC (Peptide chain release factor subunit 1-2 OS=Methanosarcina acetivorans GN=prf12 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.903e-23
Identity = 60/209 (28.71%), Postives = 107/209 (51.20%), Query Frame = 1
Query:    4 LYRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KR 630
            L +L+  +K+P NG+V +TGTV T   +   V     P +P+   +Y CD+ F+ E L E+L     +G +++D      G L G   EV+      +P K  +GGQSA RF +LR    H++ ++  +  ++ F+        + G+++ G +  K E ++       LQ K+L + D  Y  E+GF++ I  + E L ++  ++ K+
Sbjct:   74 LAKLRSLHKIPENGIVYFTGTVDTGANRTGMVNEVLFPPEPVADYIYRCDSVFYLEPLEEMLRECTTYGLLLLDLREATIGMLVGRQTEVIKHLHSTVPGKQRKGGQSAHRFEQLRRIAIHDFYKRIGDATSEAFLE--LDPAELKGILIGGHSPTKEEFNEGGFLHYELQKKVLGLFDTGYTDESGFSELINAAEETLQSIDLLKQKK 280          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_HALSA (Peptide chain release factor subunit 1 OS=Halobacterium salinarium GN=prf1 PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.467e-23
Identity = 66/193 (34.20%), Postives = 102/193 (52.85%), Query Frame = 1
Query:   10 RLKLYNKVPP-NGLVLYTGTVVTEDGKEKKVTIDFE-PFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIE 582
            RL+ Y+  PP NG+V+++G V +  G+   VT   E P +PI +  Y CD+ F TE L E+L     +G IV+D   +  G L G   + +      +P K  +GGQSA RFARLR+E   N+ ++ A +A   F+     +  + G+++ G +  K E    D     LQ K+L   DVSY  E+G +  ++
Sbjct:   81 RLRYYDTFPPDNGMVVFSGAVDSGGGRTDMVTEVLESPPQPIESFRYHCDSAFLTEPLAEMLGDKGLYGLIVLDRRESNVGWLKGKRVQPVKSAESLVPGKQRKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFV---PKRHEIDGILVGGPSPTKDEFLDGDYLHHELQDKVLGKFDVSYTDESGLSDLVD 270          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_HALS3 (Peptide chain release factor subunit 1 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=prf1 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.467e-23
Identity = 66/193 (34.20%), Postives = 102/193 (52.85%), Query Frame = 1
Query:   10 RLKLYNKVPP-NGLVLYTGTVVTEDGKEKKVTIDFE-PFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIE 582
            RL+ Y+  PP NG+V+++G V +  G+   VT   E P +PI +  Y CD+ F TE L E+L     +G IV+D   +  G L G   + +      +P K  +GGQSA RFARLR+E   N+ ++ A +A   F+     +  + G+++ G +  K E    D     LQ K+L   DVSY  E+G +  ++
Sbjct:   81 RLRYYDTFPPDNGMVVFSGAVDSGGGRTDMVTEVLESPPQPIESFRYHCDSAFLTEPLAEMLGDKGLYGLIVLDRRESNVGWLKGKRVQPVKSAESLVPGKQRKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFV---PKRHEIDGILVGGPSPTKDEFLDGDYLHHELQDKVLGKFDVSYTDESGLSDLVD 270          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_PICTO (Peptide chain release factor subunit 1 OS=Picrophilus torridus GN=prf1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.446e-23
Identity = 62/212 (29.25%), Postives = 107/212 (50.47%), Query Frame = 1
Query:   10 RLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEILINVKSIQ*KRLIGKY 645
            RLK Y + P  GLV + G + T   + +  T   EP +PI   +Y CD+ FH E L   L+  D +G IV+D      G L G   EV+      +P KH +GGQS+ RF RL     +++ +K  E+A   F+ P     +++ + + G    K    + D     ++ K+ ++ D+ Y  E+G  + +E ++E + ++K  + K +I ++
Sbjct:   75 RLKYYKQPPETGLVFFVGHIATRGDQTEMYTKIIEPPEPIQTFMYKCDSNFHLEQLESQLKEKDIYGLIVIDRKEATVGFLKGTRIEVVDYEQSLVPSKHHQGGQSSRRFERLIEIAANDFFKKIGEIANNAFM-PLIK--DINAVFIGGPGATKEYFLEKDYLRNEIKQKVKDLFDIGYTDESGLRELVEKASESIKDMKISREKDIINRF 283          
BLAST of EY702154 vs. ExPASy Swiss-Prot
Match: RF1_METMA (Peptide chain release factor subunit 1 OS=Methanosarcina mazei GN=prf1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.103e-22
Identity = 59/199 (29.65%), Postives = 100/199 (50.25%), Query Frame = 1
Query:    4 LYRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQPKILNVVDVSYGGENGFNQAIELSAEIL 600
            L RL+  +KVP NG+V +TG V     K    +    P  PI    Y CD+ F+ E L ++L+  + +G +V+D      G L G   +     T  +P K  +GGQSA RF +LR+   H++ ++  + A++ F+  A    ++ G+++ G +  K E    +     L  KIL + D +Y  E+G ++ +  + E L
Sbjct:   74 LSRLRYLDKVPENGIVYFTGAVDIGANKTSMESEVIVPPDPITVYKYHCDSSFYLEPLEDMLKDKNTYGLLVLDRREATIGLLVGKRIQPFRNLTSTVPGKQRKGGQSAHRFQQLRLIAIHDFYKRIGDAASEVFM--AVDHKDLKGVLIGGPSPTKEEFHAGEFLHHELMKKILGLFDTAYTDESGLSELVNAAGEKL 270          
The following BLAST results are available for this feature:
BLAST of EY702154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
RF1_METST7.639e-2428.37Peptide chain release factor subunit 1 OS=Methanos... [more]
RF11_METAC9.976e-2430.65Peptide chain release factor subunit 1-1 OS=Methan... [more]
RF1_HALMA1.702e-2332.70Peptide chain release factor subunit 1 OS=Haloarcu... [more]
RF1_METJA2.223e-2329.77Peptide chain release factor subunit 1 OS=Methanoc... [more]
RF1_HALWD2.903e-2332.66Peptide chain release factor subunit 1 OS=Haloquad... [more]
RF12_METAC2.903e-2328.71Peptide chain release factor subunit 1-2 OS=Methan... [more]
RF1_HALSA6.467e-2334.20Peptide chain release factor subunit 1 OS=Halobact... [more]
RF1_HALS36.467e-2334.20Peptide chain release factor subunit 1 OS=Halobact... [more]
RF1_PICTO8.446e-2329.25Peptide chain release factor subunit 1 OS=Picrophi... [more]
RF1_METMA1.103e-2229.65Peptide chain release factor subunit 1 OS=Methanos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-F09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702154 ID=EY702154; Name=EY702154; organism=Citrus sinensis; type=EST; length=894bp
GCTCTTTACAGGCTGAAGCTATATAACAAGGTTCCTCCCAATGGGCTGGT
GCTTTATACTGGAACAGTTGTTACTGAGGATGGCAAGGAAAAGAAAGTGA
CAATTGACTTTGAACCTTTCAAGCCTATTAATGCATCGTTGTATCTCTGT
GATAACAAGTTTCACACTGAAGCCTTGAATGAACTCTTAGAATCTGATGA
TAAATTTGGGTTTATTGTCATGGATGGAAATGGCACCCTATTTGGCACAT
TAAGTGGAAACACAAGAGAGGTGCTTCATAAGTTTACTGTTGATCTGCCG
AAGAAGCATGGAAGAGGAGGGCAGTCAGCTCTTCGTTTTGCTCGTCTTCG
GATGGAGAAACGGCACAACTATGTGAGGAAGACAGCAGAGCTTGCTACAC
AGTTCTTTATCAATCCTGCTACCAGTCAGCCCAATGTGTCTGGATTAATT
CTTGCTGGTTCTGCTGATTTCAAAACTGAGCTGAGCCAGTCTGATATGTT
TGATCCTCGTTTACAACCCAAGATATTGAATGTTGTTGATGTTTCTTATG
GTGGGGAAAATGGTTTTAACCAAGCAATTGAGTTGTCTGCAGAAATCTTA
ATCAATGTGAAGTCCATACAATAAAAACGTTTGATTGGAAAATACTCTTG
ACGAGATTAACCATGACACTGGAAAATATGTGTTTGGTGTTGATGACACT
TTGAAGGTTCCGAAATTGGGAGCTGCAAAAATCCTTATTGGGTGGGAAAA
ACTGGATTCAACATATATGTACTTGAAAACAGTGCTACTGCGTGAATTGT
TATAAAGAACTTAACAAAGACCAGAAGCCAATCAGAGCAATTTCCCCAAG
AAACCACATCTGCTCATTTGAAGTTCCAGAAAAAAATTTTTTAC
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