EY680416

Overview
NameEY680416
Unique NameEY680416
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680416 vs. ExPASy Swiss-Prot
Match: SYD_PYRKO (Aspartyl-tRNA synthetase OS=Pyrococcus kodakaraensis GN=aspS PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.756e-30
Identity = 76/201 (37.81%), Postives = 115/201 (57.21%), Query Frame = 3
Query:   33 FLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGVQMLKDAGVEIDPLGDLXTESERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCHDN 635
            F     F+EIHTPK+IA ++EGG+ +F + Y  + A LAQSPQL+KQ+ +     RV+E  P+FRAE+  T RHL E   +D EM   +   EVM  ++RL     + +     KEL+ +     FE  + K    R+++++ +++L D G EI    D+ TE ER LG+ ++E      Y L++YP   +PFY M  +DN
Sbjct:  150 FFHENGFIEIHTPKIIATATEGGTELFPMKYFEEDAFLAQSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDIL----NFELEEPKLPFPRVSYDKALEILGDLGKEIPWGEDIDTEGERLLGKYMMENENAPLYFLYQYPSEAKPFYIMK-YDN 345          
BLAST of EY680416 vs. ExPASy Swiss-Prot
Match: SYD_AERPE (Aspartyl-tRNA synthetase OS=Aeropyrum pernix GN=aspS PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 4.701e-30
Identity = 75/204 (36.76%), Postives = 115/204 (56.37%), Query Frame = 3
Query:   12 VGNIFTQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGVQMLKDA-GVEIDPLGDLXTESERKLGQLVLEKYGTEFYILHRYPLAVRPFYTM 620
            V  +F  +  S+ FVEI TPK++A  +E G+ VF + Y  ++A LAQSPQ +KQ ++     RVFE GPVFRAE  +T RHL E+  LD+E+   + Y++VM+ V+     I   L    ++ LE    + P  P    PK   +   +  ++L++  G +++   DL +E ER +G    E+  ++F  +  YP  VRPFYTM
Sbjct:  145 VAKVFRDYYWSQGFVEIFTPKIVAAGTESGAEVFPVVYFDKTAFLAQSPQFYKQFAVIAGLERVFEIGPVFRAEPHHTSRHLNEYHSLDIEVGFIESYNDVMNYVEGFMRAIVRMLEEDGRRVLELYGVELPRIPASGIPK---IPLRKAYEILEEKYGKKVEYGEDLDSEGERLMGAYAGEELDSDFVFIVEYPWKVRPFYTM 345          
BLAST of EY680416 vs. ExPASy Swiss-Prot
Match: SYD_METTH (Aspartyl-tRNA synthetase OS=Methanobacterium thermoautotrophicum GN=aspS PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.786e-29
Identity = 73/206 (35.44%), Postives = 116/206 (56.31%), Query Frame = 3
Query:   33 FLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAK-----QYPFEPLKYKPKTLRLTFEEGVQMLKDAGVEIDPLGDLXTESERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCHDN 635
            FL  + F+EI+TPKL+A ++EGG+ +F + Y  + A L QSPQL+KQ+ +     RV+E  P+FRAE+  T RHL E   +D+E     H  +VM I++ L V + + +N  C   LE + +     + PFE         RL ++E V+M+   GV +    DL   +E+ LG+++       +Y +  +P A++PFY MP  D+
Sbjct:  155 FLEEQGFLEINTPKLVASATEGGTELFPITYFEREAFLGQSPQLYKQIMMSTGLDRVYEIAPIFRAEEHDTLRHLNEVISIDIEASFVDH-EDVMKILENLVVRVIEDVNEHCTDALETLGRTLEVPETPFE---------RLEYDEAVEMVNSKGVPMKHGEDLPRAAEKALGEIM-----DGYYFITSWPTAIKPFYVMPDEDD 345          
BLAST of EY680416 vs. ExPASy Swiss-Prot
Match: SYD_THEVO (Aspartyl-tRNA synthetase OS=Thermoplasma volcanium GN=aspS PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.198e-29
Identity = 70/202 (34.65%), Postives = 116/202 (57.43%), Query Frame = 3
Query:   30 QFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGVQMLKDAGVEIDPLGDLXTESERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCHDN 635
            +FL S+ F+E+HTPK++A ++EGG+ +F + Y    A L QSPQL+K++ +   F +VFE GP FRAE+  T RHL EFT +D+EM    H ++ M I++    +  + + N   K+L+          + +     R+T++E +++L+  G+E     D   E  R +G     +   +FY +  +P ++RPFYTMP  D+
Sbjct:  145 EFLHSQGFIEVHTPKIVAAATEGGADLFPVKYFENDAYLNQSPQLYKEILMSSGFEKVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSFADH-NDAMRILENAVKSGIENMINENGKDLQENGINISIPEIPFP----RITYKECIKLLEKEGLEFQFGNDFSPEELRIIG-----RNFKDFYFITEWPSSLRPFYTMPNRDD 336          
BLAST of EY680416 vs. ExPASy Swiss-Prot
Match: SYD_PICTO (Aspartyl-tRNA synthetase OS=Picrophilus torridus GN=aspS PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.198e-29
Identity = 72/203 (35.47%), Postives = 118/203 (58.13%), Query Frame = 3
Query:   30 QFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGVQMLKDAGVEIDPLGDLXTESERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCHDNS 638
            ++L    F+E+HTPK++A ++EGG+ +F + Y  + A L QSPQL+K++ +   F +VFE GP FRAE   T RHL EFT +D+EM    H ++VMD+++    T+ + +N + K  L     ++ F       +  R+T+ E +  L  +G +++   D   E+ R LG    E+Y   FY +  +P+++RPFYTM   D +
Sbjct:  142 EYLNRLGFIEVHTPKIVAAATEGGADLFPVKYFERDAYLNQSPQLYKEILMAAGFEKVFEVGPAFRAEKENTLRHLNEFTSIDIEMSFADH-NDVMDVLEN---TVKNAINTL-KNNLGDELNKHGFNIDSINGRIPRITYREAIDYLNSSGFQMNFGDDFSPEAARVLG----ERY-KSFYFITEWPVSLRPFYTMKKDDET 334          
BLAST of EY680416 vs. ExPASy Swiss-Prot
Match: SYD_META3 (Aspartyl-tRNA synthetase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=aspS PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.158e-28
Identity = 69/195 (35.38%), Postives = 109/195 (55.90%), Query Frame = 3
Query:   51 FVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGVQMLKDAGVEIDPLGDLXTESERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCHDN 635
            F+++ TPKL+A ++EGG+ +F + Y  + A L QSPQL+KQM +   F RVFE GP+FRAE+  T RHL E   +D EM       + M+I++++    F  + N  +KEL+ +      +   +     R+ + E V M+   GVE++   D    +E  LG+++       FY +  +P  +RPFYT+P  DN
Sbjct:  162 FIDVDTPKLVASATEGGTELFPISYFDKEAFLGQSPQLYKQMMMAAGFDRVFEIGPIFRAEEHNTRRHLNEAISIDCEMSFADE-KDAMEILEKVINNAFTDIYNNNQKELQTLGIDLKVQETPFP----RIEYTEAVDMVNAKGVEMEWGEDFSRPAEAALGEMM-----DGFYFITDWPTEIRPFYTLPNEDN 346          
BLAST of EY680416 vs. ExPASy Swiss-Prot
Match: SYD_THEAC (Aspartyl-tRNA synthetase OS=Thermoplasma acidophilum GN=aspS PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.512e-28
Identity = 76/203 (37.44%), Postives = 113/203 (55.67%), Query Frame = 3
Query:   30 QFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYK---PKT--LRLTFEEGVQMLKDAGVEIDPLGDLXTESERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMP 623
            Q+L S+ F+E+HTPK++A ++EGGS +F + Y  + A L QSPQL+K++ +   F RVFE GP FRAE+  T RHL EFT +D+EM    H     D +  L   I  G+ N  ++  E       FE L      P+T   R+T+E+ + +L+  G++     D   +  R +G        + FY +  +P +VRPFYTMP
Sbjct:  145 QYLHSQKFIEVHTPKIVAAATEGGSDLFPVRYFEKDAYLNQSPQLYKEVLMSAGFDRVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSFADH----NDAMAMLENAIRSGIENAVRENAE------DFESLGISISVPETPFPRITYEQCIDLLQKDGIDFTFGDDFSPDQLRTIGSRF-----SGFYFITEWPSSVRPFYTMP 332          
BLAST of EY680416 vs. ExPASy Swiss-Prot
Match: SYD_ARCFU (Aspartyl-tRNA synthetase OS=Archaeoglobus fulgidus GN=aspS PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27
Identity = 70/201 (34.83%), Postives = 114/201 (56.72%), Query Frame = 3
Query:   30 QFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGVQMLKDAGVEIDPLGDLXTESERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCHD 632
            +FL  E F+E+HTPK+++ ++EGG+ +F + Y  + A L QSPQL+KQ+ +   F +VFE GP+FRAE+  T RHL E   +D+EM    H + VMD+++RL   +++ +   C++ L  +        L +     R+T++E  ++    G EI    DL T + + +G    E+ G   Y +  +P   +PFY MP  D
Sbjct:  147 EFLSEEGFIEVHTPKIVSTATEGGTELFPISYFEKEAFLNQSPQLYKQVLMAAGFEKVFEIGPIFRAEEHNTTRHLNEAISIDIEMSFTDH-NGVMDVLERLVQRVYEDVAEKCERYLGWLEVSLEIPELPFP----RITYDEAREIAARKGEEIPWGEDLSTNALKLVG----EEMG-GLYFITDWPTESKPFYAMPYED 337          
BLAST of EY680416 vs. ExPASy Swiss-Prot
Match: SYD_HALMA (Aspartyl-tRNA synthetase OS=Haloarcula marismortui GN=aspS PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.298e-27
Identity = 75/193 (38.86%), Postives = 108/193 (55.96%), Query Frame = 3
Query:   48 NFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPF-EPLKYKPKTLRLTFEEGVQMLKDAGVEIDPL---GDLXTESERKLGQLVLEKYGTEFYILHRYPLAVRPFY 614
            N  EI+TPK++A  +EGG+ +F + Y GQ A + QSPQL KQ+ +     RVFE GP+FRAE+  T RHL E T +D E     H +E MD  + +  + ++G+   C+ +LEA+  +  F  P    P   RLT+EE +  +   G   +PL    DL TE+E  LGQ V      E Y +  +P  ++PFY
Sbjct:  152 NCTEINTPKIVATGTEGGTELFPITYFGQEAFMNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFYDH-TEAMDACEHVVQSAYEGVAENCQDQLEALGLEDEFAAPEGDFP---RLTYEEALDKINATGELDEPLVWGDDLSTEAEHVLGQEV-----GEHYFITDWPSEIKPFY 335          
BLAST of EY680416 vs. ExPASy Swiss-Prot
Match: SYD_SULTO (Aspartyl-tRNA synthetase OS=Sulfolobus tokodaii GN=aspS PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.415e-26
Identity = 75/204 (36.76%), Postives = 114/204 (55.88%), Query Frame = 3
Query:   24 FTQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGLNNVCKKELEAVAKQYPFEPLKYKPKTLRLTFEEGVQMLKDAGVEIDPLGDLXTESERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCHDN 635
            F + L  E F+EI TPK+IA ++EGG+ +F + Y G+ A LAQSPQL+K++ + G   RVFE  P +RAE+S T  HL EF  +DVEM     Y++VM +++++   I   +    K+EL    K   +EP + K    RL + E +++L+  G  I    D+ T   R L + + E    + Y +  +P   RPFYT    +N
Sbjct:  144 FRETLYKEGFIEIFTPKIIASATEGGAQLFPVIYFGKEAFLAQSPQLYKEL-MAGVVERVFEVAPAWRAEESDTPFHLAEFISMDVEMAF-ADYNDVMQLLEKILHNIVKTIKEEGKEEL----KILNYEPPEVKIPIKRLKYTEAIEILRSKGYNIKFGDDIGTPELRILNEELKE----DLYFIVDWPSDARPFYTKSKSEN 337          
The following BLAST results are available for this feature:
BLAST of EY680416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
SYD_PYRKO2.756e-3037.81Aspartyl-tRNA synthetase OS=Pyrococcus kodakaraens... [more]
SYD_AERPE4.701e-3036.76Aspartyl-tRNA synthetase OS=Aeropyrum pernix GN=as... [more]
SYD_METTH1.786e-2935.44Aspartyl-tRNA synthetase OS=Methanobacterium therm... [more]
SYD_THEVO5.198e-2934.65Aspartyl-tRNA synthetase OS=Thermoplasma volcanium... [more]
SYD_PICTO5.198e-2935.47Aspartyl-tRNA synthetase OS=Picrophilus torridus G... [more]
SYD_META31.158e-2835.38Aspartyl-tRNA synthetase OS=Methanococcus aeolicus... [more]
SYD_THEAC1.512e-2837.44Aspartyl-tRNA synthetase OS=Thermoplasma acidophil... [more]
SYD_ARCFU1.280e-2734.83Aspartyl-tRNA synthetase OS=Archaeoglobus fulgidus... [more]
SYD_HALMA8.298e-2738.86Aspartyl-tRNA synthetase OS=Haloarcula marismortui... [more]
SYD_SULTO1.415e-2636.76Aspartyl-tRNA synthetase OS=Sulfolobus tokodaii GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-H02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680416 ID=EY680416; Name=EY680416; organism=Citrus sinensis; type=EST; length=817bp
CCACGCGTCCGGTTGGGAATATATTCACACAATTCTTGTTATCTGAGAAT
TTTGTTGAGATCCACACGCCAAAACTGATAGCTGGCTCAAGTGAAGGTGG
TTCTGCTGTTTTTAGGTTGGACTACAAAGGCCAGTCAGCGTGCCTGGCCC
AGTCTCCTCAGCTTCACAAGCAAATGTCAATATGTGGTGATTTTGGGCGG
GTTTTTGAGACTGGTCCTGTTTTCAGAGCAGAGGACTCGTACACTCATAG
GCATTTGTGTGAGTTTACTGGTCTTGATGTCGAAATGGAGATTAAGAAGC
ATTATTCCGAGGTAATGGATATTGTGGACCGCTTATTTGTCACAATTTTT
GACGGCTTGAATAATGTGTGCAAGAAGGAACTTGAAGCTGTGGCAAAGCA
ATATCCGTTTGAACCTCTGAAGTACAAGCCTAAGACTCTTCGTCTTACAT
TTGAAGAAGGGGTTCAAATGCTCAAGGATGCCGGAGTGGAAATTGATCCT
CTTGGGGACTTANACACAGAATCAGAGAGGAAGTTGGGCCAGCTAGTTTT
GGAGAAATATGGCACTGAATTCTATATACTCCACCGATATCCTTTGGCTG
TTAGGCCATTCTATACCATGCCCTGCCATGACAATTCTCTTTAACACCAA
CTCATTTGATGTCTTTATTAAAAGTGAAAAAGAAAATTTCAGGTGCTCAA
CGTATTCTTATACCAAAATTCTTAACCGAAACGTGCCCAAGGATGGGGGC
ATTAATGTTAAAAAAATTATCAAAAAAAATTGATTTCTTTCAAAAAGGGG
GGCACCCCCTCCCGGGG
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